RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 RGPD1P0DJD0 1748 aa3.61□□□□□ -1.83
CALD1-216ENST00000473714 PZPP20742 1482 aa3.61□□□□□ -1.83
CALD1-216ENST00000473714 GLI3P10071 1580 aa3.61□□□□□ -1.83
CALD1-216ENST00000473714 INHBBP09529 407 aa3.61□□□□□ -1.83
CALD1-216ENST00000473714 HSPA1AP0DMV8 641 aaKnown RBP3.61□□□□□ -1.83
CALD1-216ENST00000473714 HSPA1BP0DMV9 641 aaKnown RBP3.61□□□□□ -1.83
CALD1-216ENST00000473714 ATP2B4P23634 1241 aa3.61□□□□□ -1.83
CALD1-216ENST00000473714 KCNMB1Q16558 191 aa3.61□□□□□ -1.83
CALD1-216ENST00000473714 CYP27C1Q4G0S4 372 aa3.61□□□□□ -1.83
CALD1-216ENST00000473714 AMIGO3Q86WK7 504 aa3.61□□□□□ -1.83
CALD1-216ENST00000473714 SAP130Q9H0E3 1048 aa3.61□□□□□ -1.83
CALD1-216ENST00000473714 ABI2Q9NYB9 513 aaPredicted RBP3.61□□□□□ -1.83
CALD1-216ENST00000473714 ADAMTS6Q9UKP5 1117 aa3.61□□□□□ -1.83
CALD1-216ENST00000473714 VAV3Q9UKW4 847 aa3.61□□□□□ -1.83
CALD1-216ENST00000473714 GNEQ9Y223 722 aaKnown RBP3.61□□□□□ -1.83
CALD1-216ENST00000473714 CFAP65Q6ZU64 1925 aaKnown RBP3.61□□□□□ -1.83
CALD1-216ENST00000473714 USP19O94966 1318 aa3.61□□□□□ -1.83
CALD1-216ENST00000473714 UBR1Q8IWV7 1749 aa3.61□□□□□ -1.83
CALD1-216ENST00000473714 TNS1Q9HBL0 1735 aaKnown RBP3.61□□□□□ -1.83
CALD1-216ENST00000473714 CDC42BPBQ9Y5S2 1711 aa3.61□□□□□ -1.83
CALD1-216ENST00000473714 ATP10DQ9P241 1426 aa3.61□□□□□ -1.83
CALD1-216ENST00000473714 NCOA2Q15596 1464 aa3.6□□□□□ -1.83
CALD1-216ENST00000473714 ARHGAP35Q9NRY4 1499 aa3.6□□□□□ -1.83
CALD1-216ENST00000473714 DLC1Q96QB1 1528 aa3.6□□□□□ -1.83
CALD1-216ENST00000473714 PLXNC1O60486 1568 aa3.6□□□□□ -1.83
CALD1-216ENST00000473714 NRKQ7Z2Y5 1582 aa3.6□□□□□ -1.83
CALD1-216ENST00000473714 NFIBO00712 420 aa3.6□□□□□ -1.83
CALD1-216ENST00000473714 PRMT3O60678 531 aa3.6□□□□□ -1.83
CALD1-216ENST00000473714 CYP2E1P05181 493 aaPredicted RBP3.6□□□□□ -1.83
CALD1-216ENST00000473714 ACPPP15309 386 aa3.6□□□□□ -1.83
CALD1-216ENST00000473714 RAB6AP20340 208 aa3.6□□□□□ -1.83
CALD1-216ENST00000473714 BRD2P25440 801 aaKnown RBP3.6□□□□□ -1.83
CALD1-216ENST00000473714 HNRNPMP52272 730 aaKnown RBP eCLIP3.6□□□□□ -1.83
CALD1-216ENST00000473714 IKBKEQ14164 716 aa3.6□□□□□ -1.83
CALD1-216ENST00000473714 GPR162Q16538 588 aa3.6□□□□□ -1.83
CALD1-216ENST00000473714 HGSNATQ68CP4 663 aa3.6□□□□□ -1.83
CALD1-216ENST00000473714 OGFOD3Q6PK18 319 aa3.6□□□□□ -1.83
CALD1-216ENST00000473714 CAPN12Q6ZSI9 719 aa3.6□□□□□ -1.83
CALD1-216ENST00000473714 NETO1Q8TDF5 533 aa3.6□□□□□ -1.83
CALD1-216ENST00000473714 C19orf44Q9H6X5 657 aa3.6□□□□□ -1.83
CALD1-216ENST00000473714 ZMIZ1Q9ULJ6 1067 aa3.6□□□□□ -1.83
CALD1-216ENST00000473714 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.6□□□□□ -1.83
CALD1-216ENST00000473714 SLIT1O75093 1534 aa3.6□□□□□ -1.83
CALD1-216ENST00000473714 ARHGAP5Q13017 1502 aa3.6□□□□□ -1.83
CALD1-216ENST00000473714 MYOM1P52179 1685 aa3.59□□□□□ -1.83
CALD1-216ENST00000473714 NUP188Q5SRE5 1749 aa3.59□□□□□ -1.83
CALD1-216ENST00000473714 WDR90Q96KV7 1748 aa3.59□□□□□ -1.83
CALD1-216ENST00000473714 MARF1Q9Y4F3 1742 aaKnown RBP3.59□□□□□ -1.83
CALD1-216ENST00000473714 ZNF503-AS2A6NEH8 195 aa3.59□□□□□ -1.83
CALD1-216ENST00000473714 PDE2AO00408 941 aaPredicted RBP3.59□□□□□ -1.83
CALD1-216ENST00000473714 SOX1O00570 391 aaPredicted RBP3.59□□□□□ -1.83
CALD1-216ENST00000473714 TNFRSF10BO14763 440 aa3.59□□□□□ -1.83
CALD1-216ENST00000473714 C1QTNF9P0C862 333 aa3.59□□□□□ -1.83
CALD1-216ENST00000473714 ATF3P18847 181 aa3.59□□□□□ -1.83
CALD1-216ENST00000473714 ERCC3P19447 782 aa3.59□□□□□ -1.83
CALD1-216ENST00000473714 SSFA2P28290 1259 aa3.59□□□□□ -1.83
CALD1-216ENST00000473714 PRKCQQ04759 706 aa3.59□□□□□ -1.83
CALD1-216ENST00000473714 UNC5CLQ8IV45 518 aa3.59□□□□□ -1.83
CALD1-216ENST00000473714 FLAD1Q8NFF5 587 aa3.59□□□□□ -1.83
CALD1-216ENST00000473714 RELTQ969Z4 430 aa3.59□□□□□ -1.83
CALD1-216ENST00000473714 PRIMPOLQ96LW4 560 aa3.59□□□□□ -1.83
CALD1-216ENST00000473714 BCL2L13Q9BXK5 485 aa3.59□□□□□ -1.83
CALD1-216ENST00000473714 USP35Q9P2H5 1018 aa3.59□□□□□ -1.83
CALD1-216ENST00000473714 EID1Q9Y6B2 187 aa3.59□□□□□ -1.83
CALD1-216ENST00000473714 MAP3K5Q99683 1374 aa3.59□□□□□ -1.83
CALD1-216ENST00000473714 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.58□□□□□ -1.84
CALD1-216ENST00000473714 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.58□□□□□ -1.84
CALD1-216ENST00000473714 EIF4EBP3O60516 100 aaPredicted RBP3.58□□□□□ -1.84
CALD1-216ENST00000473714 TOMM70O94826 608 aa3.58□□□□□ -1.84
CALD1-216ENST00000473714 DLGAP3O95886 979 aa3.58□□□□□ -1.84
CALD1-216ENST00000473714 SWI5Q1ZZU3 235 aa3.58□□□□□ -1.84
CALD1-216ENST00000473714 ZNF326Q5BKZ1 582 aaKnown RBP3.58□□□□□ -1.84
CALD1-216ENST00000473714 SLC23A3Q6PIS1 610 aa3.58□□□□□ -1.84
CALD1-216ENST00000473714 GLYCTKQ8IVS8 523 aa3.58□□□□□ -1.84
CALD1-216ENST00000473714 PLD6Q8N2A8 252 aaKnown RBP3.58□□□□□ -1.84
CALD1-216ENST00000473714 CLP1Q92989 425 aaKnown RBP3.58□□□□□ -1.84
CALD1-216ENST00000473714 LIN37Q96GY3 246 aaPredicted RBP3.58□□□□□ -1.84
CALD1-216ENST00000473714 HHIPQ96QV1 700 aa3.58□□□□□ -1.84
CALD1-216ENST00000473714 SEMA6CQ9H3T2 930 aa3.58□□□□□ -1.84
CALD1-216ENST00000473714 KANSL3Q9P2N6 904 aa3.58□□□□□ -1.84
CALD1-216ENST00000473714 SOX13Q9UN79 622 aa3.58□□□□□ -1.84
CALD1-216ENST00000473714 ACTL7BQ9Y614 415 aa3.58□□□□□ -1.84
CALD1-216ENST00000473714 ASXL1Q8IXJ9 1541 aa3.58□□□□□ -1.84
CALD1-216ENST00000473714 SAMD9Q5K651 1589 aa3.58□□□□□ -1.84
CALD1-216ENST00000473714 RREB1Q92766 1687 aa3.58□□□□□ -1.84
CALD1-216ENST00000473714 SOWAHDA6NJG2 315 aa3.57□□□□□ -1.84
CALD1-216ENST00000473714 NPIPB6E9PJ23 425 aa3.57□□□□□ -1.84
CALD1-216ENST00000473714 CHD2O14647 1828 aaKnown RBP3.57□□□□□ -1.84
CALD1-216ENST00000473714 TET3O43151 1660 aa3.57□□□□□ -1.84
CALD1-216ENST00000473714 GRIN3BO60391 1043 aa3.57□□□□□ -1.84
CALD1-216ENST00000473714 TRPA1O75762 1119 aa3.57□□□□□ -1.84
CALD1-216ENST00000473714 PCNTO95613 3336 aa3.57□□□□□ -1.84
CALD1-216ENST00000473714 ADH5P11766 374 aa3.57□□□□□ -1.84
CALD1-216ENST00000473714 CD96P40200 585 aa3.57□□□□□ -1.84
CALD1-216ENST00000473714 SERPINB4P48594 390 aa3.57□□□□□ -1.84
CALD1-216ENST00000473714 AAMPQ13685 434 aa3.57□□□□□ -1.84
CALD1-216ENST00000473714 AOC3Q16853 763 aa3.57□□□□□ -1.84
CALD1-216ENST00000473714 ANGEL2Q5VTE6 544 aaKnown RBP3.57□□□□□ -1.84
CALD1-216ENST00000473714 CIAPIN1Q6FI81 312 aa3.57□□□□□ -1.84
CALD1-216ENST00000473714 MPZL3Q6UWV2 235 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms