RNA–Protein interactions for RNA: ENST00000473460.1

GINS1-202, Transcript of GINS complex subunit 1, humanhuman

TSL 2

Gene GINS1, Length 541 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-202ENST00000473460 MIPEPQ99797 713 aa6.61□□□□□ -1.35
GINS1-202ENST00000473460 C12orf49Q9H741 205 aa6.61□□□□□ -1.35
GINS1-202ENST00000473460 TSPAN15O95858 294 aa6.6□□□□□ -1.35
GINS1-202ENST00000473460 KRT1P04264 644 aa6.6□□□□□ -1.35
GINS1-202ENST00000473460 USP17L7P0C7H9 530 aa6.6□□□□□ -1.35
GINS1-202ENST00000473460 CFPP27918 469 aa6.6□□□□□ -1.35
GINS1-202ENST00000473460 FGD1P98174 961 aa6.6□□□□□ -1.35
GINS1-202ENST00000473460 KRTAP19-4Q3LI73 84 aa6.6□□□□□ -1.35
GINS1-202ENST00000473460 KIRREL1Q96J84 757 aa6.6□□□□□ -1.35
GINS1-202ENST00000473460 ASB16Q96NS5 453 aa6.6□□□□□ -1.35
GINS1-202ENST00000473460 FAM8A1Q9UBU6 413 aa6.6□□□□□ -1.35
GINS1-202ENST00000473460 TPX2Q9ULW0 747 aaKnown RBP6.6□□□□□ -1.35
GINS1-202ENST00000473460 FAM155AB1AL88 458 aaPredicted RBP6.59□□□□□ -1.35
GINS1-202ENST00000473460 GDNFP39905 211 aa6.59□□□□□ -1.35
GINS1-202ENST00000473460 NPAS4Q8IUM7 802 aa6.59□□□□□ -1.35
GINS1-202ENST00000473460 MFSD2AQ8NA29 543 aa6.59□□□□□ -1.35
GINS1-202ENST00000473460 KRTAP4-2Q9BYR5 136 aa6.59□□□□□ -1.35
GINS1-202ENST00000473460 RAP1GAPP47736 663 aa6.58□□□□□ -1.36
GINS1-202ENST00000473460 WIPI1Q5MNZ9 446 aaPredicted RBP6.58□□□□□ -1.36
GINS1-202ENST00000473460 LETMD1Q6P1Q0 360 aa6.58□□□□□ -1.36
GINS1-202ENST00000473460 HDXQ7Z353 690 aa6.58□□□□□ -1.36
GINS1-202ENST00000473460 SNCAIPQ9Y6H5 919 aa6.58□□□□□ -1.36
GINS1-202ENST00000473460 SUPT5HO00267 1087 aaKnown RBP6.57□□□□□ -1.36
GINS1-202ENST00000473460 TMEM67Q5HYA8 995 aa6.57□□□□□ -1.36
GINS1-202ENST00000473460 PRAMEF13Q5VWM6 474 aa6.57□□□□□ -1.36
GINS1-202ENST00000473460 LCNL1Q6ZST4 164 aa6.57□□□□□ -1.36
GINS1-202ENST00000473460 SYDE1Q6ZW31 735 aaPredicted RBP6.57□□□□□ -1.36
GINS1-202ENST00000473460 SV2BQ7L1I2 683 aa6.57□□□□□ -1.36
GINS1-202ENST00000473460 THAP5Q7Z6K1 395 aa6.57□□□□□ -1.36
GINS1-202ENST00000473460 HID1Q8IV36 788 aa6.57□□□□□ -1.36
GINS1-202ENST00000473460 ZSCAN29Q8IWY8 852 aaPredicted RBP6.57□□□□□ -1.36
GINS1-202ENST00000473460 PPP1R16BQ96T49 567 aa6.57□□□□□ -1.36
GINS1-202ENST00000473460 SPG7Q9UQ90 795 aa6.57□□□□□ -1.36
GINS1-202ENST00000473460 GFRA2O00451 464 aa6.56□□□□□ -1.36
GINS1-202ENST00000473460 CST3P01034 146 aaPredicted RBP6.56□□□□□ -1.36
GINS1-202ENST00000473460 GRK4P32298 578 aa6.56□□□□□ -1.36
GINS1-202ENST00000473460 ETF1P62495 437 aaKnown RBP6.56□□□□□ -1.36
GINS1-202ENST00000473460 TNK2Q07912 1038 aa6.56□□□□□ -1.36
GINS1-202ENST00000473460 TTBK2Q6IQ55 1244 aa6.56□□□□□ -1.36
GINS1-202ENST00000473460 MPZL3Q6UWV2 235 aa6.56□□□□□ -1.36
GINS1-202ENST00000473460 XAGE3Q8WTP9 111 aa6.56□□□□□ -1.36
GINS1-202ENST00000473460 TOX2Q96NM4 488 aa6.56□□□□□ -1.36
GINS1-202ENST00000473460 TTF2Q9UNY4 1162 aaKnown RBP6.56□□□□□ -1.36
GINS1-202ENST00000473460 PCDHB5Q9Y5E4 795 aa6.56□□□□□ -1.36
GINS1-202ENST00000473460 CBX7O95931 251 aa6.55□□□□□ -1.36
GINS1-202ENST00000473460 P4HBP07237 508 aaKnown RBP6.55□□□□□ -1.36
GINS1-202ENST00000473460 C1QTNF9P0C862 333 aa6.55□□□□□ -1.36
GINS1-202ENST00000473460 UBE2FQ969M7 185 aa6.55□□□□□ -1.36
GINS1-202ENST00000473460 ALPK1Q96QP1 1244 aa6.55□□□□□ -1.36
GINS1-202ENST00000473460 KCNK12Q9HB15 430 aa6.55□□□□□ -1.36
GINS1-202ENST00000473460 ESR1P03372 595 aa6.54□□□□□ -1.36
GINS1-202ENST00000473460 ATP2B2Q01814 1243 aa6.54□□□□□ -1.36
GINS1-202ENST00000473460 CDH24Q86UP0 819 aa6.54□□□□□ -1.36
GINS1-202ENST00000473460 LRRC56Q8IYG6 542 aaPredicted RBP6.54□□□□□ -1.36
GINS1-202ENST00000473460 DIRC2Q96SL1 478 aa6.54□□□□□ -1.36
GINS1-202ENST00000473460 ZSWIM5Q9P217 1185 aa6.54□□□□□ -1.36
GINS1-202ENST00000473460 TJP2Q9UDY2 1190 aa6.54□□□□□ -1.36
GINS1-202ENST00000473460 DNAJC25-GNG10A0A024R161 153 aa6.53□□□□□ -1.36
GINS1-202ENST00000473460 WASH4PA8MWX3 477 aa6.53□□□□□ -1.36
GINS1-202ENST00000473460 KIR3DL1P43629 444 aa6.53□□□□□ -1.36
GINS1-202ENST00000473460 SEPT6Q14141 434 aa6.53□□□□□ -1.36
GINS1-202ENST00000473460 RALGPS1Q5JS13 557 aa6.53□□□□□ -1.36
GINS1-202ENST00000473460 ZNF746Q6NUN9 644 aaPredicted RBP6.53□□□□□ -1.36
GINS1-202ENST00000473460 FBXO15Q8NCQ5 510 aaPredicted RBP6.53□□□□□ -1.36
GINS1-202ENST00000473460 DPH2Q9BQC3 489 aaPredicted RBP6.53□□□□□ -1.36
GINS1-202ENST00000473460 NSUN3Q9H649 340 aaKnown RBP6.53□□□□□ -1.36
GINS1-202ENST00000473460 IVNS1ABPQ9Y6Y0 642 aa6.53□□□□□ -1.36
GINS1-202ENST00000473460 ERVFC1P60507 584 aa6.52□□□□□ -1.37
GINS1-202ENST00000473460 RPS26P62854 115 aaKnown RBP6.52□□□□□ -1.37
GINS1-202ENST00000473460 ANKLE2Q86XL3 938 aa6.52□□□□□ -1.37
GINS1-202ENST00000473460 MRPL41Q8IXM3 137 aaKnown RBP6.52□□□□□ -1.37
GINS1-202ENST00000473460 COX4I2Q96KJ9 171 aa6.52□□□□□ -1.37
GINS1-202ENST00000473460 Q96M66 194 aa6.52□□□□□ -1.37
GINS1-202ENST00000473460 RNF19AQ9NV58 838 aa6.52□□□□□ -1.37
GINS1-202ENST00000473460 SLAMF8Q9P0V8 285 aa6.52□□□□□ -1.37
GINS1-202ENST00000473460 LDHBP07195 334 aaKnown RBP6.51□□□□□ -1.37
GINS1-202ENST00000473460 TTC6Q86TZ1 520 aa6.51□□□□□ -1.37
GINS1-202ENST00000473460 ZSCAN18Q8TBC5 510 aaPredicted RBP6.51□□□□□ -1.37
GINS1-202ENST00000473460 CCDC120Q96HB5 630 aa6.51□□□□□ -1.37
GINS1-202ENST00000473460 TACC3Q9Y6A5 838 aa6.51□□□□□ -1.37
GINS1-202ENST00000473460 CYP7A1P22680 504 aa6.5□□□□□ -1.37
GINS1-202ENST00000473460 GNA15P30679 374 aa6.5□□□□□ -1.37
GINS1-202ENST00000473460 CCDC85BQ15834 202 aaPredicted RBP6.5□□□□□ -1.37
GINS1-202ENST00000473460 AGMOQ6ZNB7 445 aa6.5□□□□□ -1.37
GINS1-202ENST00000473460 SIAH1Q8IUQ4 282 aa6.5□□□□□ -1.37
GINS1-202ENST00000473460 DNAJB8Q8NHS0 232 aa6.5□□□□□ -1.37
GINS1-202ENST00000473460 ABHD4Q8TB40 342 aa6.5□□□□□ -1.37
GINS1-202ENST00000473460 TMEM87BQ96K49 555 aa6.5□□□□□ -1.37
GINS1-202ENST00000473460 FRMD6Q96NE9 622 aa6.5□□□□□ -1.37
GINS1-202ENST00000473460 KRTAP4-11Q9BYQ6 195 aa6.5□□□□□ -1.37
GINS1-202ENST00000473460 SP110Q9HB58 689 aa6.5□□□□□ -1.37
GINS1-202ENST00000473460 TMEM59LQ9UK28 342 aa6.5□□□□□ -1.37
GINS1-202ENST00000473460 NFIBO00712 420 aa6.49□□□□□ -1.37
GINS1-202ENST00000473460 HPXP02790 462 aa6.49□□□□□ -1.37
GINS1-202ENST00000473460 PGRP06401 933 aa6.49□□□□□ -1.37
GINS1-202ENST00000473460 ZSCAN22P10073 491 aaPredicted RBP6.49□□□□□ -1.37
GINS1-202ENST00000473460 EIF4BP23588 611 aaKnown RBP6.49□□□□□ -1.37
GINS1-202ENST00000473460 LIG3P49916 1009 aa6.49□□□□□ -1.37
GINS1-202ENST00000473460 SLC6A19Q695T7 634 aa6.49□□□□□ -1.37
GINS1-202ENST00000473460 TMPRSS7Q7RTY8 843 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms