RNA–Protein interactions for RNA: ENST00000473349.1

BRD3-205, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-205ENST00000473349 CDK5RAP2Q96SN8 1893 aa11.6□□□□□ -0.55
BRD3-205ENST00000473349 LOC285556D6RIA3 1793 aa11.6□□□□□ -0.55
BRD3-205ENST00000473349 COL2A1P02458 1487 aaPredicted RBP11.6□□□□□ -0.55
BRD3-205ENST00000473349 IGSF3O75054 1194 aa11.6□□□□□ -0.55
BRD3-205ENST00000473349 MAP4K4O95819 1239 aaPredicted RBP11.6□□□□□ -0.55
BRD3-205ENST00000473349 INHAP05111 366 aa11.6□□□□□ -0.55
BRD3-205ENST00000473349 CYP7A1P22680 504 aa11.6□□□□□ -0.55
BRD3-205ENST00000473349 TRIM32Q13049 653 aa11.6□□□□□ -0.55
BRD3-205ENST00000473349 MTMR2Q13614 643 aa11.6□□□□□ -0.55
BRD3-205ENST00000473349 CEP85Q6P2H3 762 aa11.6□□□□□ -0.55
BRD3-205ENST00000473349 ASCC2Q9H1I8 757 aaPredicted RBP11.6□□□□□ -0.55
BRD3-205ENST00000473349 GPR108Q9NPR9 543 aa11.6□□□□□ -0.55
BRD3-205ENST00000473349 NOP58Q9Y2X3 529 aaKnown RBP11.6□□□□□ -0.55
BRD3-205ENST00000473349 TRIOBPQ9H2D6 2365 aa11.59□□□□□ -0.55
BRD3-205ENST00000473349 USP17L5A8MUK1 530 aa11.59□□□□□ -0.55
BRD3-205ENST00000473349 APBB1O00213 710 aa11.59□□□□□ -0.55
BRD3-205ENST00000473349 IDH1O75874 414 aaKnown RBP11.59□□□□□ -0.55
BRD3-205ENST00000473349 GJB1P08034 283 aa11.59□□□□□ -0.55
BRD3-205ENST00000473349 CAPN2P17655 700 aa11.59□□□□□ -0.55
BRD3-205ENST00000473349 GJA8P48165 433 aa11.59□□□□□ -0.55
BRD3-205ENST00000473349 UBE2Q1Q7Z7E8 422 aa11.59□□□□□ -0.55
BRD3-205ENST00000473349 U2AF1L4Q8WU68 220 aaKnown RBP11.59□□□□□ -0.55
BRD3-205ENST00000473349 DPF3Q92784 378 aa11.59□□□□□ -0.55
BRD3-205ENST00000473349 DCBLD2Q96PD2 775 aa11.59□□□□□ -0.55
BRD3-205ENST00000473349 NOL10Q9BSC4 688 aaKnown RBP11.59□□□□□ -0.55
BRD3-205ENST00000473349 IL1RAPL2Q9NP60 686 aa11.59□□□□□ -0.55
BRD3-205ENST00000473349 PI4KBQ9UBF8 816 aa11.59□□□□□ -0.55
BRD3-205ENST00000473349 SLC45A1Q9Y2W3 748 aa11.59□□□□□ -0.55
BRD3-205ENST00000473349 DOCK3Q8IZD9 2030 aa11.59□□□□□ -0.55
BRD3-205ENST00000473349 BAG3O95817 575 aa11.58□□□□□ -0.56
BRD3-205ENST00000473349 FXR1P51114 621 aaKnown RBP eCLIP11.58□□□□□ -0.56
BRD3-205ENST00000473349 PPP4CP60510 307 aa11.58□□□□□ -0.56
BRD3-205ENST00000473349 UBXN2AP68543 259 aa11.58□□□□□ -0.56
BRD3-205ENST00000473349 DIEXFQ68CQ4 756 aaKnown RBP11.58□□□□□ -0.56
BRD3-205ENST00000473349 POTEEQ6S8J3 1075 aa11.58□□□□□ -0.56
BRD3-205ENST00000473349 AACSQ86V21 672 aa11.58□□□□□ -0.56
BRD3-205ENST00000473349 RASEFQ8IZ41 740 aa11.58□□□□□ -0.56
BRD3-205ENST00000473349 CRACR2BQ8N4Y2 399 aaPredicted RBP11.58□□□□□ -0.56
BRD3-205ENST00000473349 MAGEB6Q8N7X4 407 aa11.58□□□□□ -0.56
BRD3-205ENST00000473349 PROCA1Q8NCQ7 364 aaPredicted RBP11.58□□□□□ -0.56
BRD3-205ENST00000473349 SLAIN1Q8ND83 568 aa11.58□□□□□ -0.56
BRD3-205ENST00000473349 DEFB118Q96PH6 123 aa11.58□□□□□ -0.56
BRD3-205ENST00000473349 P2RX7Q99572 595 aaKnown RBP11.58□□□□□ -0.56
BRD3-205ENST00000473349 TXNRD2Q9NNW7 524 aa11.58□□□□□ -0.56
BRD3-205ENST00000473349 HERC5Q9UII4 1024 aaKnown RBP11.58□□□□□ -0.56
BRD3-205ENST00000473349 FARP2O94887 1054 aaPredicted RBP11.57□□□□□ -0.56
BRD3-205ENST00000473349 ZYXQ15942 572 aaKnown RBP11.57□□□□□ -0.56
BRD3-205ENST00000473349 FAM110CQ1W6H9 321 aa11.57□□□□□ -0.56
BRD3-205ENST00000473349 SLFNL1Q499Z3 407 aa11.57□□□□□ -0.56
BRD3-205ENST00000473349 DIS3LQ8TF46 1054 aaKnown RBP11.57□□□□□ -0.56
BRD3-205ENST00000473349 ZNF512BQ96KM6 892 aaPredicted RBP11.57□□□□□ -0.56
BRD3-205ENST00000473349 FOCADQ5VW36 1801 aa11.57□□□□□ -0.56
BRD3-205ENST00000473349 SGPL1O95470 568 aa11.56□□□□□ -0.56
BRD3-205ENST00000473349 GH2P01242 217 aa11.56□□□□□ -0.56
BRD3-205ENST00000473349 PLCG2P16885 1265 aa11.56□□□□□ -0.56
BRD3-205ENST00000473349 BACE1P56817 501 aa11.56□□□□□ -0.56
BRD3-205ENST00000473349 SH3D19Q5HYK7 790 aa11.56□□□□□ -0.56
BRD3-205ENST00000473349 METTL16Q86W50 562 aaKnown RBP11.56□□□□□ -0.56
BRD3-205ENST00000473349 COA7Q96BR5 231 aa11.56□□□□□ -0.56
BRD3-205ENST00000473349 EDC3Q96F86 508 aaKnown RBP11.56□□□□□ -0.56
BRD3-205ENST00000473349 WDR18Q9BV38 432 aa11.56□□□□□ -0.56
BRD3-205ENST00000473349 DHX36Q9H2U1 1008 aaKnown RBP11.56□□□□□ -0.56
BRD3-205ENST00000473349 GJD2Q9UKL4 321 aa11.56□□□□□ -0.56
BRD3-205ENST00000473349 PNMA3Q9UL41 463 aa11.56□□□□□ -0.56
BRD3-205ENST00000473349 ZBTB21Q9ULJ3 1066 aa11.56□□□□□ -0.56
BRD3-205ENST00000473349 TFRCP02786 760 aaKnown RBP11.55□□□□□ -0.56
BRD3-205ENST00000473349 CHGBP05060 677 aa11.55□□□□□ -0.56
BRD3-205ENST00000473349 USP5P45974 858 aa11.55□□□□□ -0.56
BRD3-205ENST00000473349 IRX3P78415 501 aaPredicted RBP11.55□□□□□ -0.56
BRD3-205ENST00000473349 IRF5Q13568 498 aa11.55□□□□□ -0.56
BRD3-205ENST00000473349 Q3C1V9 767 aa11.55□□□□□ -0.56
BRD3-205ENST00000473349 SIRT2Q8IXJ6 389 aa11.55□□□□□ -0.56
BRD3-205ENST00000473349 NKX2-3Q8TAU0 364 aa11.55□□□□□ -0.56
BRD3-205ENST00000473349 TRIM34Q9BYJ4 488 aa11.55□□□□□ -0.56
BRD3-205ENST00000473349 AS3MTQ9HBK9 375 aa11.55□□□□□ -0.56
BRD3-205ENST00000473349 EMILIN3Q9NT22 766 aa11.55□□□□□ -0.56
BRD3-205ENST00000473349 RBM27Q9P2N5 1060 aaKnown RBP11.55□□□□□ -0.56
BRD3-205ENST00000473349 COG6Q9Y2V7 657 aa11.55□□□□□ -0.56
BRD3-205ENST00000473349 PLXNB2O15031 1838 aa11.55□□□□□ -0.56
BRD3-205ENST00000473349 SMIM22K7EJ46 135 aa11.54□□□□□ -0.56
BRD3-205ENST00000473349 ASNSP08243 561 aa11.54□□□□□ -0.56
BRD3-205ENST00000473349 CYP2B6P20813 491 aa11.54□□□□□ -0.56
BRD3-205ENST00000473349 GCLCP48506 637 aaPredicted RBP11.54□□□□□ -0.56
BRD3-205ENST00000473349 PLCD1P51178 756 aa11.54□□□□□ -0.56
BRD3-205ENST00000473349 HERVK_113P62684 666 aa11.54□□□□□ -0.56
BRD3-205ENST00000473349 FOXP4Q8IVH2 680 aaPredicted RBP11.54□□□□□ -0.56
BRD3-205ENST00000473349 RHPN1Q8TCX5 695 aa11.54□□□□□ -0.56
BRD3-205ENST00000473349 ACER1Q8TDN7 264 aa11.54□□□□□ -0.56
BRD3-205ENST00000473349 PXYLP1Q8TE99 480 aa11.54□□□□□ -0.56
BRD3-205ENST00000473349 TRIB2Q92519 343 aa11.54□□□□□ -0.56
BRD3-205ENST00000473349 PAGR1Q9BTK6 254 aa11.54□□□□□ -0.56
BRD3-205ENST00000473349 TBC1D2Q9BYX2 928 aa11.54□□□□□ -0.56
BRD3-205ENST00000473349 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.54□□□□□ -0.56
BRD3-205ENST00000473349 PORCNQ9H237 461 aa11.54□□□□□ -0.56
BRD3-205ENST00000473349 PAK6Q9NQU5 681 aaPredicted RBP11.54□□□□□ -0.56
BRD3-205ENST00000473349 TMOD4Q9NZQ9 345 aa11.54□□□□□ -0.56
BRD3-205ENST00000473349 RBPJLQ9UBG7 517 aa11.54□□□□□ -0.56
BRD3-205ENST00000473349 ZBED9Q6R2W3 1325 aa11.54□□□□□ -0.56
BRD3-205ENST00000473349 USP17L10C9JJH3 530 aa11.53□□□□□ -0.56
BRD3-205ENST00000473349 HLA-DOAP06340 250 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms