RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 A0A1B0GVL5 298 aa15.19■□□□□ 0.02
SCAMP4-207ENST00000472442 RXRAP19793 462 aa15.19■□□□□ 0.02
SCAMP4-207ENST00000472442 APOA5Q6Q788 366 aa15.19■□□□□ 0.02
SCAMP4-207ENST00000472442 FMR1NBQ8N0W7 255 aaPredicted RBP15.19■□□□□ 0.02
SCAMP4-207ENST00000472442 MRPS27Q92552 414 aaKnown RBP15.19■□□□□ 0.02
SCAMP4-207ENST00000472442 TMEM87BQ96K49 555 aa15.19■□□□□ 0.02
SCAMP4-207ENST00000472442 PDS5AQ29RF7 1337 aaKnown RBP15.19■□□□□ 0.02
SCAMP4-207ENST00000472442 SERPINB2P05120 415 aa15.19■□□□□ 0.02
SCAMP4-207ENST00000472442 ETF1P62495 437 aaKnown RBP15.19■□□□□ 0.02
SCAMP4-207ENST00000472442 MECOMQ03112 1051 aa15.19■□□□□ 0.02
SCAMP4-207ENST00000472442 RAD51AP2Q09MP3 1159 aa15.19■□□□□ 0.02
SCAMP4-207ENST00000472442 ZRSR1Q15695 479 aaKnown RBP15.19■□□□□ 0.02
SCAMP4-207ENST00000472442 MFSD6Q6ZSS7 791 aa15.19■□□□□ 0.02
SCAMP4-207ENST00000472442 ILDR1Q86SU0 546 aaPredicted RBP15.19■□□□□ 0.02
SCAMP4-207ENST00000472442 STK11IPQ8N1F8 1099 aa15.19■□□□□ 0.02
SCAMP4-207ENST00000472442 CHMP4CQ96CF2 233 aa15.19■□□□□ 0.02
SCAMP4-207ENST00000472442 NRDCO43847 1150 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 PRDX5P30044 214 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 CRY2Q49AN0 593 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 TEX35Q5T0J7 233 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 SGMS1Q86VZ5 419 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 MNS1Q8NEH6 495 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 IPO4Q8TEX9 1081 aaKnown RBP15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 PCDHA7Q9UN72 937 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 JAG2Q9Y219 1238 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 BIN1O00499 593 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 DHX16O60231 1041 aaKnown RBP15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 CDC27P30260 824 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 KCNJ6P48051 423 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 PPARAQ07869 468 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 TXNRD1Q16881 649 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 OTUD7BQ6GQQ9 843 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 CNNM2Q9H8M5 875 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 GJB4Q9NTQ9 266 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 ANKIB1Q9P2G1 1089 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 MYH13Q9UKX3 1938 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 NDUFA8P51970 172 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 DDR1Q08345 913 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 TMEM67Q5HYA8 995 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 TRIM34Q9BYJ4 488 aa15.18■□□□□ 0.02
SCAMP4-207ENST00000472442 PHLPP2Q6ZVD8 1323 aa15.17■□□□□ 0.02
SCAMP4-207ENST00000472442 URI1O94763 535 aaPredicted RBP15.17■□□□□ 0.02
SCAMP4-207ENST00000472442 TPM4P67936 248 aa15.17■□□□□ 0.02
SCAMP4-207ENST00000472442 RRP12Q5JTH9 1297 aaKnown RBP15.17■□□□□ 0.02
SCAMP4-207ENST00000472442 MYL10Q9BUA6 226 aa15.17■□□□□ 0.02
SCAMP4-207ENST00000472442 KRT23Q9C075 422 aa15.17■□□□□ 0.02
SCAMP4-207ENST00000472442 FAM217BQ9NTX9 383 aaPredicted RBP15.17■□□□□ 0.02
SCAMP4-207ENST00000472442 KIAA1468Q9P260 1216 aa15.17■□□□□ 0.02
SCAMP4-207ENST00000472442 FANCGO15287 622 aa15.17■□□□□ 0.02
SCAMP4-207ENST00000472442 LIFRP42702 1097 aa15.17■□□□□ 0.02
SCAMP4-207ENST00000472442 METAP2P50579 478 aaKnown RBP eCLIP15.17■□□□□ 0.02
SCAMP4-207ENST00000472442 CARD6Q9BX69 1037 aa15.17■□□□□ 0.02
SCAMP4-207ENST00000472442 EPC1Q9H2F5 836 aa15.17■□□□□ 0.02
SCAMP4-207ENST00000472442 MYH15Q9Y2K3 1946 aa15.17■□□□□ 0.02
SCAMP4-207ENST00000472442 MINDY4BA8MYZ0 360 aa15.16■□□□□ 0.02
SCAMP4-207ENST00000472442 CPLX1O14810 134 aa15.16■□□□□ 0.02
SCAMP4-207ENST00000472442 TADA3O75528 432 aa15.16■□□□□ 0.02
SCAMP4-207ENST00000472442 ST5P78524 1137 aa15.16■□□□□ 0.02
SCAMP4-207ENST00000472442 MICU3Q86XE3 530 aa15.16■□□□□ 0.02
SCAMP4-207ENST00000472442 GPR101Q96P66 508 aaPredicted RBP15.16■□□□□ 0.02
SCAMP4-207ENST00000472442 ZKSCAN3Q9BRR0 538 aa15.16■□□□□ 0.02
SCAMP4-207ENST00000472442 FEZ2Q9UHY8 353 aaPredicted RBP15.16■□□□□ 0.02
SCAMP4-207ENST00000472442 ANAPC4Q9UJX5 808 aa15.16■□□□□ 0.02
SCAMP4-207ENST00000472442 IFIT3O14879 490 aaKnown RBP15.16■□□□□ 0.02
SCAMP4-207ENST00000472442 TUBB4AP04350 444 aa15.16■□□□□ 0.02
SCAMP4-207ENST00000472442 NTRK3Q16288 839 aa15.16■□□□□ 0.02
SCAMP4-207ENST00000472442 PLCD3Q8N3E9 789 aa15.16■□□□□ 0.02
SCAMP4-207ENST00000472442 SMARCE1Q969G3 411 aa15.16■□□□□ 0.02
SCAMP4-207ENST00000472442 LEMD3Q9Y2U8 911 aa15.16■□□□□ 0.02
SCAMP4-207ENST00000472442 CYP2D7A0A087X1C5 515 aa15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 POLRMTO00411 1230 aaKnown RBP15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 LMOD1P29536 600 aaPredicted RBP15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 ATL3Q6DD88 541 aa15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 FBXO18Q8NFZ0 1043 aa15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 BPIFA3Q9BQP9 254 aa15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 ZCCHC17Q9NP64 241 aaKnown RBP15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 XDHP47989 1333 aa15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 ZBTB43O43298 467 aa15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 SASH3O75995 380 aa15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 GPSM2P81274 684 aa15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 TRIM65Q6PJ69 517 aa15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 RPGRQ92834 1020 aaKnown RBP15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 C8orf76Q96K31 380 aa15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 TOMM22Q9NS69 142 aa15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 AATFQ9NY61 560 aaKnown RBP eCLIP15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 BAZ2AQ9UIF9 1905 aaKnown RBP15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 OAS2P29728 719 aaKnown RBP15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 EVX2Q03828 476 aa15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 NCAPHQ15003 741 aa15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 ADALQ6DHV7 355 aa15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 NFXL1Q6ZNB6 911 aa15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 TXLNBQ8N3L3 684 aa15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 AIFM3Q96NN9 605 aa15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 BRIP1Q9BX63 1249 aa15.15■□□□□ 0.02
SCAMP4-207ENST00000472442 ATP1A3P13637 1013 aa15.14■□□□□ 0.01
SCAMP4-207ENST00000472442 ZNF827Q17R98 1081 aa15.14■□□□□ 0.01
SCAMP4-207ENST00000472442 PHKBQ93100 1093 aa15.14■□□□□ 0.01
SCAMP4-207ENST00000472442 TSPYL1Q9H0U9 437 aa15.14■□□□□ 0.01
SCAMP4-207ENST00000472442 RANBP6O60518 1105 aaKnown RBP15.14■□□□□ 0.01
SCAMP4-207ENST00000472442 FANCCQ00597 558 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms