RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 CFAP65Q6ZU64 1925 aaKnown RBP9.59□□□□□ -0.87
CD47-204ENST00000471694 TFRCP02786 760 aaKnown RBP9.59□□□□□ -0.87
CD47-204ENST00000471694 APOBRQ0VD83 1088 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 KRT26Q7Z3Y9 468 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 LRRC47Q8N1G4 583 aaKnown RBP9.59□□□□□ -0.87
CD47-204ENST00000471694 SBNO1A3KN83 1393 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 PRXQ9BXM0 1461 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 GCNT3O95395 438 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 XKR9Q5GH70 373 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 TMC4Q7Z404 712 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 TIGD1Q96MW7 591 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 LGR6Q9HBX8 967 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 CCDC171Q6TFL3 1326 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 XPOTO43592 962 aaKnown RBP9.58□□□□□ -0.88
CD47-204ENST00000471694 CKAP4Q07065 602 aaKnown RBP9.58□□□□□ -0.88
CD47-204ENST00000471694 C8orf58Q8NAV2 365 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 POLKQ9UBT6 870 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 HSPA1LP34931 641 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 GYG1P46976 350 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 CCDC183Q5T5S1 534 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 ZSCAN16Q9H4T2 348 aaPredicted RBP9.58□□□□□ -0.88
CD47-204ENST00000471694 ANXA13P27216 316 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 TFAP4Q01664 338 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 ZBTB16Q05516 673 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 HSP90AA4PQ58FG1 418 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 CFAP157Q5JU67 520 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 CTAGE1Q96RT6 745 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 PPP1R16BQ96T49 567 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 VWA3AA6NCI4 1184 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 POLA2Q14181 598 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 CALCRLQ16602 461 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 LZTS2Q9BRK4 669 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 TRAF5O00463 557 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 PTGS1P23219 599 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 CCND2P30279 289 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 CYLC1P35663 651 aaPredicted RBP9.58□□□□□ -0.88
CD47-204ENST00000471694 FBXO11Q86XK2 927 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 MRPL44Q9H9J2 332 aaKnown RBP9.58□□□□□ -0.88
CD47-204ENST00000471694 ST7Q9NRC1 585 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 HELLSQ9NRZ9 838 aa9.58□□□□□ -0.88
CD47-204ENST00000471694 SEPT9Q9UHD8 586 aaPredicted RBP9.58□□□□□ -0.88
CD47-204ENST00000471694 ZNF804BA4D1E1 1349 aa9.57□□□□□ -0.88
CD47-204ENST00000471694 PTPREP23469 700 aa9.57□□□□□ -0.88
CD47-204ENST00000471694 SPICE1Q8N0Z3 855 aa9.57□□□□□ -0.88
CD47-204ENST00000471694 SLC7A5P2Q9GIP4 190 aa9.57□□□□□ -0.88
CD47-204ENST00000471694 DNAJC5Q9H3Z4 198 aa9.57□□□□□ -0.88
CD47-204ENST00000471694 ARPP21Q9UBL0 812 aaPredicted RBP9.57□□□□□ -0.88
CD47-204ENST00000471694 TMEM232C9JQI7 657 aa9.57□□□□□ -0.88
CD47-204ENST00000471694 PPP1R7Q15435 360 aa9.57□□□□□ -0.88
CD47-204ENST00000471694 TTC22Q5TAA0 569 aa9.57□□□□□ -0.88
CD47-204ENST00000471694 DAAM2Q86T65 1068 aa9.57□□□□□ -0.88
CD47-204ENST00000471694 THRAP3Q9Y2W1 955 aaKnown RBP9.57□□□□□ -0.88
CD47-204ENST00000471694 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.57□□□□□ -0.88
CD47-204ENST00000471694 IL16Q14005 1332 aa9.57□□□□□ -0.88
CD47-204ENST00000471694 KCNG4Q8TDN1 519 aa9.57□□□□□ -0.88
CD47-204ENST00000471694 CC2D2BQ6DHV5 1058 aa9.57□□□□□ -0.88
CD47-204ENST00000471694 N4BP2L2Q92802 583 aaPredicted RBP9.57□□□□□ -0.88
CD47-204ENST00000471694 TBC1D7Q9P0N9 293 aa9.57□□□□□ -0.88
CD47-204ENST00000471694 USTQ9Y2C2 406 aa9.57□□□□□ -0.88
CD47-204ENST00000471694 LRRIQ4A6NIV6 560 aa9.57□□□□□ -0.88
CD47-204ENST00000471694 VIMP08670 466 aaKnown RBP9.57□□□□□ -0.88
CD47-204ENST00000471694 TNFAIP3P21580 790 aa9.57□□□□□ -0.88
CD47-204ENST00000471694 TPD52P55327 224 aaPredicted RBP9.57□□□□□ -0.88
CD47-204ENST00000471694 UAP1Q16222 522 aaPredicted RBP9.57□□□□□ -0.88
CD47-204ENST00000471694 MUM1L1Q5H9M0 696 aa9.57□□□□□ -0.88
CD47-204ENST00000471694 MIS18BP1Q6P0N0 1132 aa9.57□□□□□ -0.88
CD47-204ENST00000471694 DCUN1D2Q6PH85 259 aa9.57□□□□□ -0.88
CD47-204ENST00000471694 TMCO3Q6UWJ1 677 aa9.57□□□□□ -0.88
CD47-204ENST00000471694 LEO1Q8WVC0 666 aaPredicted RBP9.57□□□□□ -0.88
CD47-204ENST00000471694 USP25Q9UHP3 1055 aa9.57□□□□□ -0.88
CD47-204ENST00000471694 KIAA0232Q92628 1395 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 URI1O94763 535 aaPredicted RBP9.56□□□□□ -0.88
CD47-204ENST00000471694 ANKFY1Q9P2R3 1169 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 SYNJ2BP-COX16A0A087WUM0 186 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 SYCE3A1L190 88 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 ZNF18P17022 549 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 RAD51AP2Q09MP3 1159 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 C6orf163Q5TEZ5 329 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 CCDC77Q9BR77 488 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 COX16Q9P0S2 106 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 HACL1Q9UJ83 578 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 SPDYE2BA6NHP3 402 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 SPDYE6P0CI01 402 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 GNAT1P11488 350 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 TEKT3Q9BXF9 490 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 DENND3A2RUS2 1198 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 SEL1L2Q5TEA6 688 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 SYNE4Q8N205 404 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 IPO4Q8TEX9 1081 aaKnown RBP9.56□□□□□ -0.88
CD47-204ENST00000471694 DDX19AQ9NUU7 478 aaKnown RBP9.56□□□□□ -0.88
CD47-204ENST00000471694 ATP8B3O60423 1300 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 BBOX1O75936 387 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 GDF11O95390 407 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 ECE1P42892 770 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 FMNL3Q8IVF7 1028 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 URGCPQ8TCY9 931 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 SNX29Q8TEQ0 813 aa9.56□□□□□ -0.88
CD47-204ENST00000471694 COL17A1Q9UMD9 1497 aaPredicted RBP9.56□□□□□ -0.88
CD47-204ENST00000471694 PLCD1P51178 756 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 KIF5AQ12840 1032 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms