RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 POTEFA5A3E0 1075 aa18.13■□□□□ 0.49
VPS8-221ENST00000471655 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.13■□□□□ 0.49
VPS8-221ENST00000471655 TAOK2Q9UL54 1235 aa18.13■□□□□ 0.49
VPS8-221ENST00000471655 ZBTB21Q9ULJ3 1066 aa18.13■□□□□ 0.49
VPS8-221ENST00000471655 USP17L10C9JJH3 530 aa18.12■□□□□ 0.49
VPS8-221ENST00000471655 HOXA7P31268 230 aaPredicted RBP18.12■□□□□ 0.49
VPS8-221ENST00000471655 ADD2P35612 726 aa18.12■□□□□ 0.49
VPS8-221ENST00000471655 GCLCP48506 637 aaPredicted RBP18.12■□□□□ 0.49
VPS8-221ENST00000471655 EDC3Q96F86 508 aaKnown RBP18.12■□□□□ 0.49
VPS8-221ENST00000471655 TMEM106CQ9BVX2 250 aa18.12■□□□□ 0.49
VPS8-221ENST00000471655 GDF11O95390 407 aa18.11■□□□□ 0.49
VPS8-221ENST00000471655 MTMR2Q13614 643 aa18.11■□□□□ 0.49
VPS8-221ENST00000471655 UBE3CQ15386 1083 aa18.11■□□□□ 0.49
VPS8-221ENST00000471655 FAM110CQ1W6H9 321 aa18.11■□□□□ 0.49
VPS8-221ENST00000471655 TMOD4Q9NZQ9 345 aa18.11■□□□□ 0.49
VPS8-221ENST00000471655 MYPNQ86TC9 1320 aa18.11■□□□□ 0.49
VPS8-221ENST00000471655 MGAMO43451 1857 aa18.1■□□□□ 0.49
VPS8-221ENST00000471655 DDX60LQ5H9U9 1706 aaKnown RBP18.1■□□□□ 0.49
VPS8-221ENST00000471655 SMARCA5O60264 1052 aaPredicted RBP18.1■□□□□ 0.49
VPS8-221ENST00000471655 PLCD1P51178 756 aa18.1■□□□□ 0.49
VPS8-221ENST00000471655 GABPAQ06546 454 aa18.1■□□□□ 0.49
VPS8-221ENST00000471655 SLC4A8Q2Y0W8 1093 aa18.1■□□□□ 0.49
VPS8-221ENST00000471655 ZSCAN25Q6NSZ9 544 aa18.1■□□□□ 0.49
VPS8-221ENST00000471655 RAET1EQ8TD07 263 aa18.1■□□□□ 0.49
VPS8-221ENST00000471655 SH3TC2Q8TF17 1288 aa18.1■□□□□ 0.49
VPS8-221ENST00000471655 BCL11AQ9H165 835 aa18.1■□□□□ 0.49
VPS8-221ENST00000471655 ASCC2Q9H1I8 757 aaPredicted RBP18.1■□□□□ 0.49
VPS8-221ENST00000471655 ECHDC1Q9NTX5 307 aa18.1■□□□□ 0.49
VPS8-221ENST00000471655 GH2P01242 217 aa18.09■□□□□ 0.49
VPS8-221ENST00000471655 POLR3DP05423 398 aaPredicted RBP18.09■□□□□ 0.49
VPS8-221ENST00000471655 GRK4P32298 578 aa18.09■□□□□ 0.49
VPS8-221ENST00000471655 RRP1P56182 461 aaKnown RBP18.09■□□□□ 0.49
VPS8-221ENST00000471655 SHROOM1Q2M3G4 852 aaPredicted RBP18.09■□□□□ 0.49
VPS8-221ENST00000471655 CERKLQ49MI3 558 aaPredicted RBP18.09■□□□□ 0.49
VPS8-221ENST00000471655 LCORLQ8N3X6 602 aa18.09■□□□□ 0.49
VPS8-221ENST00000471655 ANKRD13CQ8N6S4 541 aa18.09■□□□□ 0.49
VPS8-221ENST00000471655 DCP1AQ9NPI6 582 aaPredicted RBP18.09■□□□□ 0.49
VPS8-221ENST00000471655 ATP8A2Q9NTI2 1148 aa18.09■□□□□ 0.49
VPS8-221ENST00000471655 MCM9Q9NXL9 1143 aa18.09■□□□□ 0.49
VPS8-221ENST00000471655 ECM2O94769 699 aaPredicted RBP18.08■□□□□ 0.48
VPS8-221ENST00000471655 SHMT1P34896 483 aa18.08■□□□□ 0.48
VPS8-221ENST00000471655 PRKCZQ05513 592 aa18.08■□□□□ 0.48
VPS8-221ENST00000471655 IRF5Q13568 498 aa18.08■□□□□ 0.48
VPS8-221ENST00000471655 ABCB5Q2M3G0 1257 aa18.08■□□□□ 0.48
VPS8-221ENST00000471655 USP17L2Q6R6M4 530 aa18.08■□□□□ 0.48
VPS8-221ENST00000471655 C12orf42Q96LP6 360 aa18.08■□□□□ 0.48
VPS8-221ENST00000471655 MORF4L1Q9UBU8 362 aa18.08■□□□□ 0.48
VPS8-221ENST00000471655 PCDHB15Q9Y5E8 787 aa18.08■□□□□ 0.48
VPS8-221ENST00000471655 CENPFP49454 3210 aa18.08■□□□□ 0.48
VPS8-221ENST00000471655 TNPO2O14787 897 aaKnown RBP18.07■□□□□ 0.48
VPS8-221ENST00000471655 EN2P19622 333 aaPredicted RBP18.07■□□□□ 0.48
VPS8-221ENST00000471655 SLAIN1Q8ND83 568 aa18.07■□□□□ 0.48
VPS8-221ENST00000471655 PXYLP1Q8TE99 480 aa18.07■□□□□ 0.48
VPS8-221ENST00000471655 SDR42E1Q8WUS8 393 aa18.07■□□□□ 0.48
VPS8-221ENST00000471655 GPATCH3Q96I76 525 aa18.07■□□□□ 0.48
VPS8-221ENST00000471655 ARMT1Q9H993 441 aa18.07■□□□□ 0.48
VPS8-221ENST00000471655 CABP5Q9NP86 173 aa18.07■□□□□ 0.48
VPS8-221ENST00000471655 EMILIN3Q9NT22 766 aa18.07■□□□□ 0.48
VPS8-221ENST00000471655 GABRQQ9UN88 632 aa18.07■□□□□ 0.48
VPS8-221ENST00000471655 NAV1Q8NEY1 1877 aa18.07■□□□□ 0.48
VPS8-221ENST00000471655 MBD4O95243 580 aa18.06■□□□□ 0.48
VPS8-221ENST00000471655 IRX3P78415 501 aaPredicted RBP18.06■□□□□ 0.48
VPS8-221ENST00000471655 COA7Q96BR5 231 aa18.06■□□□□ 0.48
VPS8-221ENST00000471655 KIAA1683Q9H0B3 1180 aa18.06■□□□□ 0.48
VPS8-221ENST00000471655 SWAP70Q9UH65 585 aa18.06■□□□□ 0.48
VPS8-221ENST00000471655 KIAA0100Q14667 2235 aaKnown RBP18.06■□□□□ 0.48
VPS8-221ENST00000471655 FLT3LGP49771 235 aa18.05■□□□□ 0.48
VPS8-221ENST00000471655 USP14P54578 494 aa18.05■□□□□ 0.48
VPS8-221ENST00000471655 SLFNL1Q499Z3 407 aa18.05■□□□□ 0.48
VPS8-221ENST00000471655 GTF3C2Q8WUA4 911 aaPredicted RBP18.05■□□□□ 0.48
VPS8-221ENST00000471655 P2RX7Q99572 595 aaKnown RBP18.05■□□□□ 0.48
VPS8-221ENST00000471655 MYH7P12883 1935 aa18.05■□□□□ 0.48
VPS8-221ENST00000471655 PDE4DIPQ5VU43 2346 aa18.04■□□□□ 0.48
VPS8-221ENST00000471655 PRKAB2O43741 272 aa18.04■□□□□ 0.48
VPS8-221ENST00000471655 GUCY1A2P33402 732 aa18.04■□□□□ 0.48
VPS8-221ENST00000471655 HERVK_113P62684 666 aa18.04■□□□□ 0.48
VPS8-221ENST00000471655 UBXN2AP68543 259 aa18.04■□□□□ 0.48
VPS8-221ENST00000471655 RAB3GAP1Q15042 981 aa18.04■□□□□ 0.48
VPS8-221ENST00000471655 PRPF38BQ5VTL8 546 aaKnown RBP18.04■□□□□ 0.48
VPS8-221ENST00000471655 KBTBD3Q8NAB2 608 aa18.04■□□□□ 0.48
VPS8-221ENST00000471655 TTC41PQ6P2S7 1318 aa18.03■□□□□ 0.48
VPS8-221ENST00000471655 ADCY3O60266 1144 aa18.03■□□□□ 0.48
VPS8-221ENST00000471655 MTFR1Q15390 333 aa18.03■□□□□ 0.48
VPS8-221ENST00000471655 C12orf60Q5U649 245 aa18.03■□□□□ 0.48
VPS8-221ENST00000471655 NKX2-3Q8TAU0 364 aa18.03■□□□□ 0.48
VPS8-221ENST00000471655 DDRGK1Q96HY6 314 aa18.03■□□□□ 0.48
VPS8-221ENST00000471655 FEZ1Q99689 392 aa18.03■□□□□ 0.48
VPS8-221ENST00000471655 PUS7LQ9H0K6 701 aaKnown RBP18.03■□□□□ 0.48
VPS8-221ENST00000471655 USP17L15C9J2P7 530 aa18.02■□□□□ 0.48
VPS8-221ENST00000471655 USP17L13C9JLJ4 530 aa18.02■□□□□ 0.48
VPS8-221ENST00000471655 USP17L11C9JVI0 530 aa18.02■□□□□ 0.48
VPS8-221ENST00000471655 USP17L18D6R9N7 530 aa18.02■□□□□ 0.48
VPS8-221ENST00000471655 USP17L22D6RA61 530 aa18.02■□□□□ 0.48
VPS8-221ENST00000471655 USP17L17D6RBQ6 530 aa18.02■□□□□ 0.48
VPS8-221ENST00000471655 USP17L19D6RCP7 530 aa18.02■□□□□ 0.48
VPS8-221ENST00000471655 USP17L20D6RJB6 530 aa18.02■□□□□ 0.48
VPS8-221ENST00000471655 CHGBP05060 677 aa18.02■□□□□ 0.48
VPS8-221ENST00000471655 GJB1P08034 283 aa18.02■□□□□ 0.48
VPS8-221ENST00000471655 ZFYP08048 801 aaPredicted RBP18.02■□□□□ 0.48
VPS8-221ENST00000471655 CAPN2P17655 700 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms