RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 RFC4P35249 363 aa7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 TFCP2Q12800 502 aa7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 TXNRD1Q16881 649 aa7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 CCDC152Q4G0S7 254 aa7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 TNNI3KQ59H18 835 aa7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 SLC10A5Q5PT55 438 aa7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 USPL1Q5W0Q7 1092 aa7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 ATG9AQ7Z3C6 839 aa7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 ZNF295-AS1Q8N0V1 137 aa7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 RETREG2Q8NC44 543 aa7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 PI4K2BQ8TCG2 481 aa7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 CLP1Q92989 425 aaKnown RBP7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 RILPL2Q969X0 211 aa7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 AIDAQ96BJ3 306 aa7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 EAF2Q96CJ1 260 aaPredicted RBP7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 IPO9Q96P70 1041 aaKnown RBP7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 SETDB2Q96T68 719 aa7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 LRRC4BQ9NT99 713 aa7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 FPGT-TNNI3KV9GXZ4 949 aa7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 LY75O60449 1722 aa7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 SERTM1A2A2V5 107 aa7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 REC8O95072 547 aa7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 APBA3O96018 575 aa7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 ATP5JP18859 108 aa7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 IGFBP4P22692 258 aa7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 ITGA6P23229 1130 aa7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 SSFA2P28290 1259 aa7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 PLA2G4AP47712 749 aa7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 MFAP1P55081 439 aaKnown RBP7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 PSMA6P60900 246 aaKnown RBP7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 PDE4CQ08493 712 aa7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 TBC1D9BQ66K14 1250 aa7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 TPTE2Q6XPS3 522 aa7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 SYNE4Q8N205 404 aa7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 ZDHHC1Q8WTX9 485 aa7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 EVI5LQ96CN4 794 aa7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 TBC1D32Q96NH3 1257 aa7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 GAS2L1Q99501 681 aaPredicted RBP7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 C22orf23Q9BZE7 217 aa7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 CCDC8Q9H0W5 538 aaPredicted RBP7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 RGS17Q9UGC6 210 aaPredicted RBP7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 ZNF232Q9UNY5 417 aa7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 DYRK1BQ9Y463 629 aa7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 NUP98P52948 1817 aa7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 ANKRD36CQ5JPF3 1778 aa7.38□□□□□ -1.23
SMNDC1-204ENST00000471297 MYH14Q7Z406 1995 aaKnown RBP7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 RTL9Q8NET4 1388 aa7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 FAM177BA6PVY3 158 aa7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 HIP1O00291 1037 aa7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 EPB41L2O43491 1005 aaKnown RBP7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 CHMLP26374 656 aa7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 IGHMBP2P38935 993 aaKnown RBP7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 RBM25P49756 843 aaKnown RBP7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 SF3B3Q15393 1217 aaKnown RBP7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 LRRC24Q50LG9 513 aa7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 LDHAL6AQ6ZMR3 332 aa7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 TICAM2Q86XR7 235 aa7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 CCDC155Q8N6L0 562 aa7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 FLAD1Q8NFF5 587 aa7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 RUFY2Q8WXA3 655 aa7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 MPHOSPH8Q99549 860 aa7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 GREM2Q9H772 168 aa7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 CNNM1Q9NRU3 951 aa7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 HCN4Q9Y3Q4 1203 aa7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 RIPOR2Q9Y4F9 1068 aa7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 C4BP0C0L5 1744 aa7.37□□□□□ -1.23
SMNDC1-204ENST00000471297 BRWD3Q6RI45 1802 aa7.36□□□□□ -1.23
SMNDC1-204ENST00000471297 MROH5Q6ZUA9 1318 aa7.36□□□□□ -1.23
SMNDC1-204ENST00000471297 HCLS1P14317 486 aaPredicted RBP7.36□□□□□ -1.23
SMNDC1-204ENST00000471297 OCLNQ16625 522 aa7.36□□□□□ -1.23
SMNDC1-204ENST00000471297 METTL24Q5JXM2 366 aa7.36□□□□□ -1.23
SMNDC1-204ENST00000471297 SH3PXD2AQ5TCZ1 1133 aa7.36□□□□□ -1.23
SMNDC1-204ENST00000471297 TSHZ3Q63HK5 1081 aa7.36□□□□□ -1.23
SMNDC1-204ENST00000471297 POTEAQ6S8J7 498 aa7.36□□□□□ -1.23
SMNDC1-204ENST00000471297 BICDL1Q6ZP65 573 aa7.36□□□□□ -1.23
SMNDC1-204ENST00000471297 NBPF5PQ86XG9 351 aaPredicted RBP7.36□□□□□ -1.23
SMNDC1-204ENST00000471297 STAG2Q8N3U4 1231 aa7.36□□□□□ -1.23
SMNDC1-204ENST00000471297 NEUROD6Q96NK8 337 aa7.36□□□□□ -1.23
SMNDC1-204ENST00000471297 CDC5LQ99459 802 aaKnown RBP7.36□□□□□ -1.23
SMNDC1-204ENST00000471297 C2orf49Q9BVC5 232 aaPredicted RBP7.36□□□□□ -1.23
SMNDC1-204ENST00000471297 PUS3Q9BZE2 481 aaKnown RBP7.36□□□□□ -1.23
SMNDC1-204ENST00000471297 NXF1Q9UBU9 619 aaKnown RBP7.36□□□□□ -1.23
SMNDC1-204ENST00000471297 SRP68Q9UHB9 627 aaKnown RBP7.36□□□□□ -1.23
SMNDC1-204ENST00000471297 USTQ9Y2C2 406 aa7.36□□□□□ -1.23
SMNDC1-204ENST00000471297 BCORQ6W2J9 1755 aa7.36□□□□□ -1.23
SMNDC1-204ENST00000471297 A0A1B0GTH6 734 aa7.35□□□□□ -1.23
SMNDC1-204ENST00000471297 A0A1B0GUL7 405 aa7.35□□□□□ -1.23
SMNDC1-204ENST00000471297 EML1O00423 815 aa7.35□□□□□ -1.23
SMNDC1-204ENST00000471297 PPFIA3O75145 1194 aa7.35□□□□□ -1.23
SMNDC1-204ENST00000471297 F11P03951 625 aa7.35□□□□□ -1.23
SMNDC1-204ENST00000471297 MSX1P28360 303 aa7.35□□□□□ -1.23
SMNDC1-204ENST00000471297 TXLNAP40222 546 aa7.35□□□□□ -1.23
SMNDC1-204ENST00000471297 TIMM10P62072 90 aa7.35□□□□□ -1.23
SMNDC1-204ENST00000471297 CCDC158Q5M9N0 1113 aa7.35□□□□□ -1.23
SMNDC1-204ENST00000471297 HAUS7Q99871 368 aa7.35□□□□□ -1.23
SMNDC1-204ENST00000471297 DBNDD2Q9BQY9 259 aa7.35□□□□□ -1.23
SMNDC1-204ENST00000471297 USP26Q9BXU7 913 aa7.35□□□□□ -1.23
SMNDC1-204ENST00000471297 BOLA2Q9H3K6 86 aa7.35□□□□□ -1.23
SMNDC1-204ENST00000471297 DBNLQ9UJU6 430 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms