RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 CCDC178Q5BJE1 867 aa30.3■■■□□ 2.44
U2AF1-208ENST00000471250 TCP11L1Q9NUJ3 509 aa30.3■■■□□ 2.44
U2AF1-208ENST00000471250 BCS1LQ9Y276 419 aa30.3■■■□□ 2.44
U2AF1-208ENST00000471250 NMT2O60551 498 aa30.29■■■□□ 2.44
U2AF1-208ENST00000471250 PPFIA3O75145 1194 aa30.29■■■□□ 2.44
U2AF1-208ENST00000471250 PPP2R5BQ15173 497 aa30.29■■■□□ 2.44
U2AF1-208ENST00000471250 SKOR2Q2VWA4 1001 aaPredicted RBP30.29■■■□□ 2.44
U2AF1-208ENST00000471250 NFKBIEO00221 500 aa30.28■■■□□ 2.44
U2AF1-208ENST00000471250 FOXD4L6Q3SYB3 417 aaPredicted RBP30.28■■■□□ 2.44
U2AF1-208ENST00000471250 FOXD4L3Q6VB84 417 aaPredicted RBP30.28■■■□□ 2.44
U2AF1-208ENST00000471250 CATIPQ7Z7H3 387 aa30.28■■■□□ 2.44
U2AF1-208ENST00000471250 FANCBQ8NB91 859 aa30.28■■■□□ 2.44
U2AF1-208ENST00000471250 ANKS1AQ92625 1134 aa30.28■■■□□ 2.44
U2AF1-208ENST00000471250 IDI2Q9BXS1 227 aa30.28■■■□□ 2.44
U2AF1-208ENST00000471250 CCDC196A0A1B0GTZ2 297 aa30.27■■■□□ 2.44
U2AF1-208ENST00000471250 CFAP100Q494V2 611 aa30.27■■■□□ 2.44
U2AF1-208ENST00000471250 DGKHQ86XP1 1220 aa30.27■■■□□ 2.44
U2AF1-208ENST00000471250 RGS22Q8NE09 1264 aa30.27■■■□□ 2.44
U2AF1-208ENST00000471250 NPM3O75607 178 aaKnown RBP30.27■■■□□ 2.44
U2AF1-208ENST00000471250 DDAH1O94760 285 aa30.27■■■□□ 2.44
U2AF1-208ENST00000471250 TSPY3P0CV98 308 aa30.27■■■□□ 2.44
U2AF1-208ENST00000471250 TSPY8P0CW00 308 aa30.27■■■□□ 2.44
U2AF1-208ENST00000471250 CALM1P0DP23 149 aa30.27■■■□□ 2.44
U2AF1-208ENST00000471250 CALM2P0DP24 149 aa30.27■■■□□ 2.44
U2AF1-208ENST00000471250 CALM3P0DP25 149 aa30.27■■■□□ 2.44
U2AF1-208ENST00000471250 IFNAR1P17181 557 aa30.27■■■□□ 2.44
U2AF1-208ENST00000471250 GABPAQ06546 454 aa30.27■■■□□ 2.44
U2AF1-208ENST00000471250 NFIAQ12857 509 aa30.27■■■□□ 2.44
U2AF1-208ENST00000471250 NUP133Q8WUM0 1156 aa30.27■■■□□ 2.44
U2AF1-208ENST00000471250 IL17RBQ9NRM6 502 aa30.27■■■□□ 2.44
U2AF1-208ENST00000471250 TCHHQ07283 1943 aa30.26■■■□□ 2.43
U2AF1-208ENST00000471250 STK36Q9NRP7 1315 aa30.26■■■□□ 2.43
U2AF1-208ENST00000471250 LTBP3Q9NS15 1303 aa30.26■■■□□ 2.43
U2AF1-208ENST00000471250 PRPF40AO75400 957 aaKnown RBP30.26■■■□□ 2.43
U2AF1-208ENST00000471250 RCSD1Q6JBY9 416 aa30.26■■■□□ 2.43
U2AF1-208ENST00000471250 FERMT3Q86UX7 667 aa30.26■■■□□ 2.43
U2AF1-208ENST00000471250 ARFGEF1Q9Y6D6 1849 aa30.25■■■□□ 2.43
U2AF1-208ENST00000471250 RESTQ13127 1097 aa30.25■■■□□ 2.43
U2AF1-208ENST00000471250 ZSCAN16Q9H4T2 348 aaPredicted RBP30.25■■■□□ 2.43
U2AF1-208ENST00000471250 TROAPQ12815 778 aa30.24■■■□□ 2.43
U2AF1-208ENST00000471250 AGBL3Q8NEM8 1001 aa30.24■■■□□ 2.43
U2AF1-208ENST00000471250 SPON1Q9HCB6 807 aa30.24■■■□□ 2.43
U2AF1-208ENST00000471250 HDAC9Q9UKV0 1011 aa30.24■■■□□ 2.43
U2AF1-208ENST00000471250 FOSBP53539 338 aa30.23■■■□□ 2.43
U2AF1-208ENST00000471250 SSRP1Q08945 709 aaKnown RBP30.23■■■□□ 2.43
U2AF1-208ENST00000471250 NLGN2Q8NFZ4 835 aa30.23■■■□□ 2.43
U2AF1-208ENST00000471250 NEDD1Q8NHV4 660 aa30.23■■■□□ 2.43
U2AF1-208ENST00000471250 PHKBQ93100 1093 aa30.23■■■□□ 2.43
U2AF1-208ENST00000471250 C8orf76Q96K31 380 aa30.23■■■□□ 2.43
U2AF1-208ENST00000471250 FMNL1O95466 1100 aaPredicted RBP30.23■■■□□ 2.43
U2AF1-208ENST00000471250 HLA-DOAP06340 250 aa30.23■■■□□ 2.43
U2AF1-208ENST00000471250 CXCL9Q07325 125 aa30.23■■■□□ 2.43
U2AF1-208ENST00000471250 TMEM87AQ8NBN3 555 aa30.23■■■□□ 2.43
U2AF1-208ENST00000471250 JDP2Q8WYK2 163 aa30.23■■■□□ 2.43
U2AF1-208ENST00000471250 RBM28Q9NW13 759 aaKnown RBP30.23■■■□□ 2.43
U2AF1-208ENST00000471250 FAM198AQ9UFP1 575 aa30.23■■■□□ 2.43
U2AF1-208ENST00000471250 SWAP70Q9UH65 585 aa30.23■■■□□ 2.43
U2AF1-208ENST00000471250 CNPY2Q9Y2B0 182 aa30.23■■■□□ 2.43
U2AF1-208ENST00000471250 DNM1Q05193 864 aaKnown RBP30.22■■■□□ 2.43
U2AF1-208ENST00000471250 PRMT6Q96LA8 375 aaPredicted RBP30.22■■■□□ 2.43
U2AF1-208ENST00000471250 SERPINB13Q9UIV8 391 aa30.22■■■□□ 2.43
U2AF1-208ENST00000471250 NBPF11Q86T75 865 aa30.21■■■□□ 2.43
U2AF1-208ENST00000471250 ZFPM1Q8IX07 1006 aa30.21■■■□□ 2.43
U2AF1-208ENST00000471250 EHD4Q9H223 541 aa30.21■■■□□ 2.43
U2AF1-208ENST00000471250 DHX36Q9H2U1 1008 aaKnown RBP30.21■■■□□ 2.43
U2AF1-208ENST00000471250 TDRD3Q9H7E2 651 aaKnown RBP30.21■■■□□ 2.43
U2AF1-208ENST00000471250 ZBTB12Q9Y330 459 aaPredicted RBP30.21■■■□□ 2.43
U2AF1-208ENST00000471250 CACNB3P54284 484 aa30.2■■■□□ 2.43
U2AF1-208ENST00000471250 CIAPIN1Q6FI81 312 aa30.2■■■□□ 2.43
U2AF1-208ENST00000471250 CRACR2BQ8N4Y2 399 aaPredicted RBP30.2■■■□□ 2.43
U2AF1-208ENST00000471250 FBXO18Q8NFZ0 1043 aa30.2■■■□□ 2.43
U2AF1-208ENST00000471250 ALG1Q9BT22 464 aa30.2■■■□□ 2.43
U2AF1-208ENST00000471250 SLC26A6Q9BXS9 759 aa30.2■■■□□ 2.43
U2AF1-208ENST00000471250 KAT14Q9H8E8 782 aa30.2■■■□□ 2.43
U2AF1-208ENST00000471250 MYH8P13535 1937 aa30.19■■■□□ 2.42
U2AF1-208ENST00000471250 GUCY1B3Q02153 619 aa30.19■■■□□ 2.42
U2AF1-208ENST00000471250 USP48Q86UV5 1035 aa30.19■■■□□ 2.42
U2AF1-208ENST00000471250 TRIM22Q8IYM9 498 aa30.19■■■□□ 2.42
U2AF1-208ENST00000471250 OGFOD1Q8N543 542 aa30.19■■■□□ 2.42
U2AF1-208ENST00000471250 WASF1Q92558 559 aa30.19■■■□□ 2.42
U2AF1-208ENST00000471250 PLIN4Q96Q06 1357 aa30.19■■■□□ 2.42
U2AF1-208ENST00000471250 SPDYE2BA6NHP3 402 aa30.18■■■□□ 2.42
U2AF1-208ENST00000471250 ENTPD3O75355 529 aa30.18■■■□□ 2.42
U2AF1-208ENST00000471250 SPDYE6P0CI01 402 aa30.18■■■□□ 2.42
U2AF1-208ENST00000471250 KLHL40Q2TBA0 621 aa30.18■■■□□ 2.42
U2AF1-208ENST00000471250 MAP3K14Q99558 947 aa30.18■■■□□ 2.42
U2AF1-208ENST00000471250 GDPD2Q9HCC8 539 aa30.18■■■□□ 2.42
U2AF1-208ENST00000471250 TAOK2Q9UL54 1235 aa30.18■■■□□ 2.42
U2AF1-208ENST00000471250 DDX49Q9Y6V7 483 aaKnown RBP30.18■■■□□ 2.42
U2AF1-208ENST00000471250 SIPA1L1O43166 1804 aa30.17■■■□□ 2.42
U2AF1-208ENST00000471250 KRT85P78386 507 aa30.17■■■□□ 2.42
U2AF1-208ENST00000471250 DLGAP5Q15398 846 aa30.17■■■□□ 2.42
U2AF1-208ENST00000471250 NCLP19338 710 aaKnown RBP30.17■■■□□ 2.42
U2AF1-208ENST00000471250 NOVP48745 357 aa30.17■■■□□ 2.42
U2AF1-208ENST00000471250 TCP10Q12799 353 aa30.17■■■□□ 2.42
U2AF1-208ENST00000471250 TNIP1Q15025 636 aa30.17■■■□□ 2.42
U2AF1-208ENST00000471250 CSPP1Q1MSJ5 1256 aa30.17■■■□□ 2.42
U2AF1-208ENST00000471250 OTUD7BQ6GQQ9 843 aa30.17■■■□□ 2.42
U2AF1-208ENST00000471250 FAM173BQ6P4H8 233 aa30.17■■■□□ 2.42
U2AF1-208ENST00000471250 MTMR14Q8NCE2 650 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms