RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 SH3BP5LQ7L8J4 393 aa17.75■□□□□ 0.43
COL4A5-203ENST00000470339 CCDC83Q8IWF9 413 aa17.75■□□□□ 0.43
COL4A5-203ENST00000470339 NEDD1Q8NHV4 660 aa17.75■□□□□ 0.43
COL4A5-203ENST00000470339 CHMP5Q9NZZ3 219 aa17.75■□□□□ 0.43
COL4A5-203ENST00000470339 TNKSO95271 1327 aa17.74■□□□□ 0.43
COL4A5-203ENST00000470339 SHTN1A0MZ66 631 aa17.74■□□□□ 0.43
COL4A5-203ENST00000470339 CLRN2A0PK11 232 aa17.74■□□□□ 0.43
COL4A5-203ENST00000470339 DDTLA6NHG4 134 aaPredicted RBP17.74■□□□□ 0.43
COL4A5-203ENST00000470339 CCDC69A6NI79 296 aa17.74■□□□□ 0.43
COL4A5-203ENST00000470339 TSPY3P0CV98 308 aa17.74■□□□□ 0.43
COL4A5-203ENST00000470339 TSPY8P0CW00 308 aa17.74■□□□□ 0.43
COL4A5-203ENST00000470339 PDIA4P13667 645 aaKnown RBP17.74■□□□□ 0.43
COL4A5-203ENST00000470339 TNFAIP1Q13829 316 aa17.74■□□□□ 0.43
COL4A5-203ENST00000470339 PPP2R5BQ15173 497 aa17.74■□□□□ 0.43
COL4A5-203ENST00000470339 FAM47AQ5JRC9 791 aa17.74■□□□□ 0.43
COL4A5-203ENST00000470339 APOA5Q6Q788 366 aa17.74■□□□□ 0.43
COL4A5-203ENST00000470339 NFXL1Q6ZNB6 911 aa17.74■□□□□ 0.43
COL4A5-203ENST00000470339 DGKHQ86XP1 1220 aa17.74■□□□□ 0.43
COL4A5-203ENST00000470339 ZSCAN29Q8IWY8 852 aaPredicted RBP17.74■□□□□ 0.43
COL4A5-203ENST00000470339 ENAHQ8N8S7 591 aaPredicted RBP17.74■□□□□ 0.43
COL4A5-203ENST00000470339 NECAB1Q8N987 351 aa17.74■□□□□ 0.43
COL4A5-203ENST00000470339 CCDC17Q96LX7 622 aa17.74■□□□□ 0.43
COL4A5-203ENST00000470339 CNTNAP1P78357 1384 aa17.74■□□□□ 0.43
COL4A5-203ENST00000470339 NID2Q14112 1375 aa17.74■□□□□ 0.43
COL4A5-203ENST00000470339 GREB1LQ9C091 1923 aaPredicted RBP17.73■□□□□ 0.43
COL4A5-203ENST00000470339 TCP10L2B9ZVM9 353 aa17.73■□□□□ 0.43
COL4A5-203ENST00000470339 ST3GAL1Q11201 340 aa17.73■□□□□ 0.43
COL4A5-203ENST00000470339 KIF4BQ2VIQ3 1234 aa17.73■□□□□ 0.43
COL4A5-203ENST00000470339 IFIT1BQ5T764 474 aaKnown RBP17.73■□□□□ 0.43
COL4A5-203ENST00000470339 DPY19L2Q6NUT2 758 aa17.73■□□□□ 0.43
COL4A5-203ENST00000470339 SLC44A5Q8NCS7 719 aa17.73■□□□□ 0.43
COL4A5-203ENST00000470339 ZKSCAN3Q9BRR0 538 aa17.73■□□□□ 0.43
COL4A5-203ENST00000470339 FOXD4L1Q9NU39 408 aa17.73■□□□□ 0.43
COL4A5-203ENST00000470339 HERC5Q9UII4 1024 aaKnown RBP17.73■□□□□ 0.43
COL4A5-203ENST00000470339 HPS5Q9UPZ3 1129 aa17.73■□□□□ 0.43
COL4A5-203ENST00000470339 SMC3Q9UQE7 1217 aa17.73■□□□□ 0.43
COL4A5-203ENST00000470339 SLC12A7Q9Y666 1083 aa17.73■□□□□ 0.43
COL4A5-203ENST00000470339 PLIN4Q96Q06 1357 aa17.73■□□□□ 0.43
COL4A5-203ENST00000470339 GOLGA8BA8MQT2 603 aa17.72■□□□□ 0.43
COL4A5-203ENST00000470339 ZBTB43O43298 467 aa17.72■□□□□ 0.43
COL4A5-203ENST00000470339 SHMT1P34896 483 aa17.72■□□□□ 0.43
COL4A5-203ENST00000470339 NOVP48745 357 aa17.72■□□□□ 0.43
COL4A5-203ENST00000470339 SCRN1Q12765 414 aa17.72■□□□□ 0.43
COL4A5-203ENST00000470339 STK3Q13188 491 aa17.72■□□□□ 0.43
COL4A5-203ENST00000470339 PPP4R3BQ5MIZ7 849 aa17.72■□□□□ 0.43
COL4A5-203ENST00000470339 TATDN1Q6P1N9 297 aa17.72■□□□□ 0.43
COL4A5-203ENST00000470339 SAMD7Q7Z3H4 446 aa17.72■□□□□ 0.43
COL4A5-203ENST00000470339 CRACR2BQ8N4Y2 399 aaPredicted RBP17.72■□□□□ 0.43
COL4A5-203ENST00000470339 TRIM34Q9BYJ4 488 aa17.72■□□□□ 0.43
COL4A5-203ENST00000470339 VEZTQ9HBM0 779 aa17.72■□□□□ 0.43
COL4A5-203ENST00000470339 IL17RBQ9NRM6 502 aa17.72■□□□□ 0.43
COL4A5-203ENST00000470339 TBC1D12O60347 775 aa17.71■□□□□ 0.43
COL4A5-203ENST00000470339 DDNO94850 711 aaPredicted RBP17.71■□□□□ 0.43
COL4A5-203ENST00000470339 EGFRP00533 1210 aa17.71■□□□□ 0.43
COL4A5-203ENST00000470339 CALM1P0DP23 149 aa17.71■□□□□ 0.43
COL4A5-203ENST00000470339 CALM2P0DP24 149 aa17.71■□□□□ 0.43
COL4A5-203ENST00000470339 CALM3P0DP25 149 aa17.71■□□□□ 0.43
COL4A5-203ENST00000470339 LMOD1P29536 600 aaPredicted RBP17.71■□□□□ 0.43
COL4A5-203ENST00000470339 NUCB2P80303 420 aa17.71■□□□□ 0.43
COL4A5-203ENST00000470339 TBC1D10BQ4KMP7 808 aaPredicted RBP17.71■□□□□ 0.43
COL4A5-203ENST00000470339 RBM26Q5T8P6 1007 aaKnown RBP17.71■□□□□ 0.43
COL4A5-203ENST00000470339 CSRNP1Q96S65 589 aa17.71■□□□□ 0.43
COL4A5-203ENST00000470339 SENP2Q9HC62 589 aa17.71■□□□□ 0.43
COL4A5-203ENST00000470339 PGAP2Q9UHJ9 254 aa17.71■□□□□ 0.43
COL4A5-203ENST00000470339 NAP1L2Q9ULW6 460 aaPredicted RBP17.71■□□□□ 0.43
COL4A5-203ENST00000470339 CCDC196A0A1B0GTZ2 297 aa17.7■□□□□ 0.42
COL4A5-203ENST00000470339 METAP2P50579 478 aaKnown RBP eCLIP17.7■□□□□ 0.42
COL4A5-203ENST00000470339 MAP3K10Q02779 954 aa17.7■□□□□ 0.42
COL4A5-203ENST00000470339 RCSD1Q6JBY9 416 aa17.7■□□□□ 0.42
COL4A5-203ENST00000470339 CATIPQ7Z7H3 387 aa17.7■□□□□ 0.42
COL4A5-203ENST00000470339 APOBEC3FQ8IUX4 373 aaKnown RBP17.7■□□□□ 0.42
COL4A5-203ENST00000470339 ZNF654Q8IZM8 581 aa17.7■□□□□ 0.42
COL4A5-203ENST00000470339 SMARCC2Q8TAQ2 1214 aa17.7■□□□□ 0.42
COL4A5-203ENST00000470339 L3MBTL3Q96JM7 780 aaPredicted RBP17.7■□□□□ 0.42
COL4A5-203ENST00000470339 MAP3K14Q99558 947 aa17.7■□□□□ 0.42
COL4A5-203ENST00000470339 ADARB2Q9NS39 739 aaKnown RBP17.7■□□□□ 0.42
COL4A5-203ENST00000470339 SCN4AP35499 1836 aa17.7■□□□□ 0.42
COL4A5-203ENST00000470339 POLR2AP24928 1970 aaKnown RBP17.7■□□□□ 0.42
COL4A5-203ENST00000470339 IGKV6D-41A0A0C4DH26 115 aa17.69■□□□□ 0.42
COL4A5-203ENST00000470339 DDAH1O94760 285 aa17.69■□□□□ 0.42
COL4A5-203ENST00000470339 CCT2P78371 535 aaKnown RBP17.69■□□□□ 0.42
COL4A5-203ENST00000470339 HMGN5P82970 282 aaKnown RBP17.69■□□□□ 0.42
COL4A5-203ENST00000470339 CPLX2Q6PUV4 134 aaKnown RBP17.69■□□□□ 0.42
COL4A5-203ENST00000470339 DNAJC18Q9H819 358 aa17.69■□□□□ 0.42
COL4A5-203ENST00000470339 HACL1Q9UJ83 578 aa17.69■□□□□ 0.42
COL4A5-203ENST00000470339 NMT2O60551 498 aa17.68■□□□□ 0.42
COL4A5-203ENST00000470339 CDKL5O76039 1030 aa17.68■□□□□ 0.42
COL4A5-203ENST00000470339 PDCP20941 246 aa17.68■□□□□ 0.42
COL4A5-203ENST00000470339 GJB2P29033 226 aa17.68■□□□□ 0.42
COL4A5-203ENST00000470339 EPS15P42566 896 aa17.68■□□□□ 0.42
COL4A5-203ENST00000470339 RASA3Q14644 834 aa17.68■□□□□ 0.42
COL4A5-203ENST00000470339 CERKLQ49MI3 558 aaPredicted RBP17.68■□□□□ 0.42
COL4A5-203ENST00000470339 FANCBQ8NB91 859 aa17.68■□□□□ 0.42
COL4A5-203ENST00000470339 NSUN7Q8NE18 718 aaKnown RBP17.68■□□□□ 0.42
COL4A5-203ENST00000470339 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.68■□□□□ 0.42
COL4A5-203ENST00000470339 KAT14Q9H8E8 782 aa17.68■□□□□ 0.42
COL4A5-203ENST00000470339 KIF3AQ9Y496 699 aa17.68■□□□□ 0.42
COL4A5-203ENST00000470339 MYH4Q9Y623 1939 aa17.68■□□□□ 0.42
COL4A5-203ENST00000470339 PITPNM2Q9BZ72 1349 aa17.68■□□□□ 0.42
COL4A5-203ENST00000470339 DCAF8L1A6NGE4 600 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms