RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 ARMC5Q96C12 935 aa11.21□□□□□ -0.61
SHROOM3-203ENST00000469923 ZNF333Q96JL9 665 aa11.21□□□□□ -0.61
SHROOM3-203ENST00000469923 HAUS7Q99871 368 aa11.21□□□□□ -0.61
SHROOM3-203ENST00000469923 ASCC2Q9H1I8 757 aaPredicted RBP11.21□□□□□ -0.61
SHROOM3-203ENST00000469923 PAG1Q9NWQ8 432 aa11.21□□□□□ -0.61
SHROOM3-203ENST00000469923 ADD2P35612 726 aa11.2□□□□□ -0.62
SHROOM3-203ENST00000469923 MAP3K12Q12852 859 aa11.2□□□□□ -0.62
SHROOM3-203ENST00000469923 SEPT2Q15019 361 aa11.2□□□□□ -0.62
SHROOM3-203ENST00000469923 TATDN1Q6P1N9 297 aa11.2□□□□□ -0.62
SHROOM3-203ENST00000469923 SEC62Q99442 399 aaKnown RBP11.2□□□□□ -0.62
SHROOM3-203ENST00000469923 NOL10Q9BSC4 688 aaKnown RBP11.2□□□□□ -0.62
SHROOM3-203ENST00000469923 RBPJLQ9UBG7 517 aa11.2□□□□□ -0.62
SHROOM3-203ENST00000469923 SRRDQ9UH36 339 aa11.2□□□□□ -0.62
SHROOM3-203ENST00000469923 ZBTB21Q9ULJ3 1066 aa11.2□□□□□ -0.62
SHROOM3-203ENST00000469923 CDK5RAP2Q96SN8 1893 aa11.19□□□□□ -0.62
SHROOM3-203ENST00000469923 HMMRO75330 724 aa11.19□□□□□ -0.62
SHROOM3-203ENST00000469923 IGHDP01880 384 aa11.19□□□□□ -0.62
SHROOM3-203ENST00000469923 GABPAQ06546 454 aa11.19□□□□□ -0.62
SHROOM3-203ENST00000469923 HSP90AB4PQ58FF6 505 aa11.19□□□□□ -0.62
SHROOM3-203ENST00000469923 FASTKD5Q7L8L6 764 aaKnown RBP11.19□□□□□ -0.62
SHROOM3-203ENST00000469923 CRACR2BQ8N4Y2 399 aaPredicted RBP11.19□□□□□ -0.62
SHROOM3-203ENST00000469923 OSBP2Q969R2 916 aa11.19□□□□□ -0.62
SHROOM3-203ENST00000469923 WDR18Q9BV38 432 aa11.19□□□□□ -0.62
SHROOM3-203ENST00000469923 LRRCC1Q9C099 1032 aa11.19□□□□□ -0.62
SHROOM3-203ENST00000469923 DCP1AQ9NPI6 582 aaPredicted RBP11.19□□□□□ -0.62
SHROOM3-203ENST00000469923 INCENPQ9NQS7 918 aa11.19□□□□□ -0.62
SHROOM3-203ENST00000469923 MCM9Q9NXL9 1143 aa11.19□□□□□ -0.62
SHROOM3-203ENST00000469923 AGTPBP1Q9UPW5 1226 aa11.19□□□□□ -0.62
SHROOM3-203ENST00000469923 TACC3Q9Y6A5 838 aa11.19□□□□□ -0.62
SHROOM3-203ENST00000469923 LAMB1P07942 1786 aa11.18□□□□□ -0.62
SHROOM3-203ENST00000469923 CNMDO75829 334 aa11.18□□□□□ -0.62
SHROOM3-203ENST00000469923 AKR1B1P15121 316 aa11.18□□□□□ -0.62
SHROOM3-203ENST00000469923 FLT3LGP49771 235 aa11.18□□□□□ -0.62
SHROOM3-203ENST00000469923 BACE1P56817 501 aa11.18□□□□□ -0.62
SHROOM3-203ENST00000469923 RAB3GAP1Q15042 981 aa11.18□□□□□ -0.62
SHROOM3-203ENST00000469923 SH3D19Q5HYK7 790 aa11.18□□□□□ -0.62
SHROOM3-203ENST00000469923 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.18□□□□□ -0.62
SHROOM3-203ENST00000469923 SHISA4Q96DD7 197 aa11.18□□□□□ -0.62
SHROOM3-203ENST00000469923 UNC93B1Q9H1C4 597 aa11.18□□□□□ -0.62
SHROOM3-203ENST00000469923 HERC5Q9UII4 1024 aaKnown RBP11.18□□□□□ -0.62
SHROOM3-203ENST00000469923 GJD2Q9UKL4 321 aa11.18□□□□□ -0.62
SHROOM3-203ENST00000469923 DOCK2Q92608 1830 aa11.18□□□□□ -0.62
SHROOM3-203ENST00000469923 RANBP2P49792 3224 aaKnown RBP11.17□□□□□ -0.62
SHROOM3-203ENST00000469923 USP17L12C9JPN9 530 aa11.17□□□□□ -0.62
SHROOM3-203ENST00000469923 USP17L21D6R901 530 aa11.17□□□□□ -0.62
SHROOM3-203ENST00000469923 M0R2C6 588 aa11.17□□□□□ -0.62
SHROOM3-203ENST00000469923 POLR3DP05423 398 aaPredicted RBP11.17□□□□□ -0.62
SHROOM3-203ENST00000469923 PLCG2P16885 1265 aa11.17□□□□□ -0.62
SHROOM3-203ENST00000469923 IRX6P78412 446 aaPredicted RBP11.17□□□□□ -0.62
SHROOM3-203ENST00000469923 CERKLQ49MI3 558 aaPredicted RBP11.17□□□□□ -0.62
SHROOM3-203ENST00000469923 SLC9C1Q4G0N8 1177 aa11.17□□□□□ -0.62
SHROOM3-203ENST00000469923 EXOC6Q8TAG9 804 aa11.17□□□□□ -0.62
SHROOM3-203ENST00000469923 NKX2-3Q8TAU0 364 aa11.17□□□□□ -0.62
SHROOM3-203ENST00000469923 CHMP4CQ96CF2 233 aa11.17□□□□□ -0.62
SHROOM3-203ENST00000469923 STRBPQ96SI9 672 aaKnown RBP11.17□□□□□ -0.62
SHROOM3-203ENST00000469923 PARK7Q99497 189 aaKnown RBP11.17□□□□□ -0.62
SHROOM3-203ENST00000469923 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.17□□□□□ -0.62
SHROOM3-203ENST00000469923 PORCNQ9H237 461 aa11.17□□□□□ -0.62
SHROOM3-203ENST00000469923 DHX36Q9H2U1 1008 aaKnown RBP11.17□□□□□ -0.62
SHROOM3-203ENST00000469923 ZCCHC17Q9NP64 241 aaKnown RBP11.17□□□□□ -0.62
SHROOM3-203ENST00000469923 TAOK2Q9UL54 1235 aa11.17□□□□□ -0.62
SHROOM3-203ENST00000469923 MYPNQ86TC9 1320 aa11.16□□□□□ -0.62
SHROOM3-203ENST00000469923 PTPRFP10586 1907 aa11.16□□□□□ -0.62
SHROOM3-203ENST00000469923 GSG1L2A8MUP6 293 aa11.16□□□□□ -0.62
SHROOM3-203ENST00000469923 CTR9Q6PD62 1173 aa11.16□□□□□ -0.62
SHROOM3-203ENST00000469923 CCDC129Q6ZRS4 1044 aa11.16□□□□□ -0.62
SHROOM3-203ENST00000469923 PI4K2BQ8TCG2 481 aa11.16□□□□□ -0.62
SHROOM3-203ENST00000469923 ECHDC1Q9NTX5 307 aa11.16□□□□□ -0.62
SHROOM3-203ENST00000469923 SERPINB13Q9UIV8 391 aa11.16□□□□□ -0.62
SHROOM3-203ENST00000469923 COL2A1P02458 1487 aaPredicted RBP11.15□□□□□ -0.62
SHROOM3-203ENST00000469923 USP17L10C9JJH3 530 aa11.15□□□□□ -0.62
SHROOM3-203ENST00000469923 ADCY3O60266 1144 aa11.15□□□□□ -0.62
SHROOM3-203ENST00000469923 CCL5P13501 91 aa11.15□□□□□ -0.62
SHROOM3-203ENST00000469923 GRK4P32298 578 aa11.15□□□□□ -0.62
SHROOM3-203ENST00000469923 CCL14Q16627 93 aa11.15□□□□□ -0.62
SHROOM3-203ENST00000469923 ABCB5Q2M3G0 1257 aa11.15□□□□□ -0.62
SHROOM3-203ENST00000469923 ANKRD45Q5TZF3 282 aa11.15□□□□□ -0.62
SHROOM3-203ENST00000469923 RAET1EQ8TD07 263 aa11.15□□□□□ -0.62
SHROOM3-203ENST00000469923 EPB41L4AQ9HCS5 686 aaPredicted RBP11.15□□□□□ -0.62
SHROOM3-203ENST00000469923 BTBD7Q9P203 1132 aa11.15□□□□□ -0.62
SHROOM3-203ENST00000469923 SLC4A4Q9Y6R1 1079 aa11.15□□□□□ -0.62
SHROOM3-203ENST00000469923 DOCK1Q14185 1865 aa11.15□□□□□ -0.63
SHROOM3-203ENST00000469923 MYH1P12882 1939 aa11.14□□□□□ -0.63
SHROOM3-203ENST00000469923 MPHOSPH10O00566 681 aaKnown RBP11.14□□□□□ -0.63
SHROOM3-203ENST00000469923 FOXP2O15409 715 aa11.14□□□□□ -0.63
SHROOM3-203ENST00000469923 HLA-DOAP06340 250 aa11.14□□□□□ -0.63
SHROOM3-203ENST00000469923 ASNSP08243 561 aa11.14□□□□□ -0.63
SHROOM3-203ENST00000469923 CYP2B6P20813 491 aa11.14□□□□□ -0.63
SHROOM3-203ENST00000469923 CDK8P49336 464 aa11.14□□□□□ -0.63
SHROOM3-203ENST00000469923 HERVK_113P62684 666 aa11.14□□□□□ -0.63
SHROOM3-203ENST00000469923 KIF22Q14807 665 aa11.14□□□□□ -0.63
SHROOM3-203ENST00000469923 TTF1Q15361 905 aaPredicted RBP11.14□□□□□ -0.63
SHROOM3-203ENST00000469923 C12orf60Q5U649 245 aa11.14□□□□□ -0.63
SHROOM3-203ENST00000469923 B4GALNT3Q6L9W6 998 aa11.14□□□□□ -0.63
SHROOM3-203ENST00000469923 SPICE1Q8N0Z3 855 aa11.14□□□□□ -0.63
SHROOM3-203ENST00000469923 PROCA1Q8NCQ7 364 aaPredicted RBP11.14□□□□□ -0.63
SHROOM3-203ENST00000469923 SMCR8Q8TEV9 937 aaPredicted RBP11.14□□□□□ -0.63
SHROOM3-203ENST00000469923 PAGR1Q9BTK6 254 aa11.14□□□□□ -0.63
SHROOM3-203ENST00000469923 TRIM34Q9BYJ4 488 aa11.14□□□□□ -0.63
SHROOM3-203ENST00000469923 CRNKL1Q9BZJ0 848 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms