RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 PRC1O43663 620 aa12.25□□□□□ -0.45
THBS3-206ENST00000469769 LIFRP42702 1097 aa12.25□□□□□ -0.45
THBS3-206ENST00000469769 AK2P54819 239 aa12.25□□□□□ -0.45
THBS3-206ENST00000469769 ANKRD1Q15327 319 aa12.25□□□□□ -0.45
THBS3-206ENST00000469769 SGMS1Q86VZ5 419 aa12.25□□□□□ -0.45
THBS3-206ENST00000469769 ZSCAN29Q8IWY8 852 aaPredicted RBP12.25□□□□□ -0.45
THBS3-206ENST00000469769 TNS4Q8IZW8 715 aa12.25□□□□□ -0.45
THBS3-206ENST00000469769 ZNF444Q8N0Y2 327 aaPredicted RBP12.25□□□□□ -0.45
THBS3-206ENST00000469769 DCPSQ96C86 337 aaKnown RBP12.25□□□□□ -0.45
THBS3-206ENST00000469769 HOOK2Q96ED9 719 aa12.25□□□□□ -0.45
THBS3-206ENST00000469769 MKNK2Q9HBH9 465 aa12.25□□□□□ -0.45
THBS3-206ENST00000469769 IL17RBQ9NRM6 502 aa12.25□□□□□ -0.45
THBS3-206ENST00000469769 ZNF112Q9UJU3 913 aa12.25□□□□□ -0.45
THBS3-206ENST00000469769 SH2B2O14492 632 aaPredicted RBP12.24□□□□□ -0.45
THBS3-206ENST00000469769 PRDM1O75626 825 aa12.24□□□□□ -0.45
THBS3-206ENST00000469769 SLURP2P0DP57 97 aa12.24□□□□□ -0.45
THBS3-206ENST00000469769 TFAP4Q01664 338 aa12.24□□□□□ -0.45
THBS3-206ENST00000469769 SLC4A8Q2Y0W8 1093 aa12.24□□□□□ -0.45
THBS3-206ENST00000469769 CCDC178Q5BJE1 867 aa12.24□□□□□ -0.45
THBS3-206ENST00000469769 NBPF12Q5TAG4 269 aaPredicted RBP12.24□□□□□ -0.45
THBS3-206ENST00000469769 RCSD1Q6JBY9 416 aa12.24□□□□□ -0.45
THBS3-206ENST00000469769 Q6ZUG5 572 aa12.24□□□□□ -0.45
THBS3-206ENST00000469769 DGKHQ86XP1 1220 aa12.24□□□□□ -0.45
THBS3-206ENST00000469769 TMTC2Q8N394 836 aa12.24□□□□□ -0.45
THBS3-206ENST00000469769 TBC1D2Q9BYX2 928 aa12.24□□□□□ -0.45
THBS3-206ENST00000469769 RRAGCQ9HB90 399 aa12.24□□□□□ -0.45
THBS3-206ENST00000469769 LY9Q9HBG7 655 aa12.24□□□□□ -0.45
THBS3-206ENST00000469769 GINM1Q9NU53 330 aa12.24□□□□□ -0.45
THBS3-206ENST00000469769 ANGEL1Q9UNK9 670 aaKnown RBP12.24□□□□□ -0.45
THBS3-206ENST00000469769 SSC5DA1L4H1 1573 aa12.23□□□□□ -0.45
THBS3-206ENST00000469769 RANBP6O60518 1105 aaKnown RBP12.23□□□□□ -0.45
THBS3-206ENST00000469769 ANP32AP39687 249 aaKnown RBP12.23□□□□□ -0.45
THBS3-206ENST00000469769 RRP1BQ14684 758 aaKnown RBP12.23□□□□□ -0.45
THBS3-206ENST00000469769 SUPT20HL1Q3ZLR7 823 aa12.23□□□□□ -0.45
THBS3-206ENST00000469769 CERKLQ49MI3 558 aaPredicted RBP12.23□□□□□ -0.45
THBS3-206ENST00000469769 RRP12Q5JTH9 1297 aaKnown RBP12.23□□□□□ -0.45
THBS3-206ENST00000469769 CDC37L1Q7L3B6 337 aa12.23□□□□□ -0.45
THBS3-206ENST00000469769 CHST3Q7LGC8 479 aa12.23□□□□□ -0.45
THBS3-206ENST00000469769 LDHDQ86WU2 507 aa12.23□□□□□ -0.45
THBS3-206ENST00000469769 IQCA1Q86XH1 822 aa12.23□□□□□ -0.45
THBS3-206ENST00000469769 SULF1Q8IWU6 871 aa12.23□□□□□ -0.45
THBS3-206ENST00000469769 CRACR2BQ8N4Y2 399 aaPredicted RBP12.23□□□□□ -0.45
THBS3-206ENST00000469769 TCEANC2Q96MN5 208 aa12.23□□□□□ -0.45
THBS3-206ENST00000469769 ZSCAN10Q96SZ4 725 aaPredicted RBP12.23□□□□□ -0.45
THBS3-206ENST00000469769 LIMCH1Q9UPQ0 1083 aa12.23□□□□□ -0.45
THBS3-206ENST00000469769 PAPPA2Q9BXP8 1791 aa12.23□□□□□ -0.45
THBS3-206ENST00000469769 NID2Q14112 1375 aa12.22□□□□□ -0.45
THBS3-206ENST00000469769 TSPY2A6NKD2 308 aa12.22□□□□□ -0.45
THBS3-206ENST00000469769 AKR1B1P15121 316 aa12.22□□□□□ -0.45
THBS3-206ENST00000469769 GUCY1A2P33402 732 aa12.22□□□□□ -0.45
THBS3-206ENST00000469769 CAP2P40123 477 aa12.22□□□□□ -0.45
THBS3-206ENST00000469769 RCAN1P53805 252 aa12.22□□□□□ -0.45
THBS3-206ENST00000469769 FAM47AQ5JRC9 791 aa12.22□□□□□ -0.45
THBS3-206ENST00000469769 DCAF15Q66K64 600 aa12.22□□□□□ -0.45
THBS3-206ENST00000469769 KRT26Q7Z3Y9 468 aa12.22□□□□□ -0.45
THBS3-206ENST00000469769 STK11IPQ8N1F8 1099 aa12.22□□□□□ -0.45
THBS3-206ENST00000469769 ENAHQ8N8S7 591 aaPredicted RBP12.22□□□□□ -0.45
THBS3-206ENST00000469769 ZNF274Q96GC6 653 aaPredicted RBP12.22□□□□□ -0.45
THBS3-206ENST00000469769 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.22□□□□□ -0.45
THBS3-206ENST00000469769 NMRK2Q9NPI5 230 aa12.22□□□□□ -0.45
THBS3-206ENST00000469769 TPCN1Q9ULQ1 816 aa12.22□□□□□ -0.45
THBS3-206ENST00000469769 SCAF8Q9UPN6 1271 aaKnown RBP12.22□□□□□ -0.45
THBS3-206ENST00000469769 TNKSO95271 1327 aa12.21□□□□□ -0.45
THBS3-206ENST00000469769 FAM196BA6NMK8 535 aa12.21□□□□□ -0.45
THBS3-206ENST00000469769 K7ELQ4 463 aaPredicted RBP12.21□□□□□ -0.45
THBS3-206ENST00000469769 IFIT3O14879 490 aaKnown RBP12.21□□□□□ -0.45
THBS3-206ENST00000469769 POTEIP0CG38 1075 aa12.21□□□□□ -0.45
THBS3-206ENST00000469769 POTEJP0CG39 1038 aa12.21□□□□□ -0.45
THBS3-206ENST00000469769 TSPY3P0CV98 308 aa12.21□□□□□ -0.45
THBS3-206ENST00000469769 TSPY8P0CW00 308 aa12.21□□□□□ -0.45
THBS3-206ENST00000469769 JAG1P78504 1218 aa12.21□□□□□ -0.45
THBS3-206ENST00000469769 CUL4AQ13619 759 aa12.21□□□□□ -0.45
THBS3-206ENST00000469769 SART3Q15020 963 aaKnown RBP12.21□□□□□ -0.45
THBS3-206ENST00000469769 MAP3K11Q16584 847 aa12.21□□□□□ -0.45
THBS3-206ENST00000469769 TMEM67Q5HYA8 995 aa12.21□□□□□ -0.45
THBS3-206ENST00000469769 PPP4R3BQ5MIZ7 849 aa12.21□□□□□ -0.45
THBS3-206ENST00000469769 TMEM179Q6ZVK1 233 aa12.21□□□□□ -0.45
THBS3-206ENST00000469769 SIAH1Q8IUQ4 282 aa12.21□□□□□ -0.45
THBS3-206ENST00000469769 BRF1Q92994 677 aa12.21□□□□□ -0.45
THBS3-206ENST00000469769 MKL1Q969V6 931 aa12.21□□□□□ -0.45
THBS3-206ENST00000469769 KLRG1Q96E93 195 aa12.21□□□□□ -0.45
THBS3-206ENST00000469769 ZSCAN31Q96LW9 406 aaPredicted RBP12.21□□□□□ -0.45
THBS3-206ENST00000469769 LRRC2Q9BYS8 371 aa12.21□□□□□ -0.45
THBS3-206ENST00000469769 GPHNQ9NQX3 736 aaPredicted RBP12.21□□□□□ -0.45
THBS3-206ENST00000469769 TOMM22Q9NS69 142 aa12.21□□□□□ -0.45
THBS3-206ENST00000469769 MTMR4Q9NYA4 1195 aa12.21□□□□□ -0.45
THBS3-206ENST00000469769 SYNPO2Q9UMS6 1093 aa12.21□□□□□ -0.45
THBS3-206ENST00000469769 ADM5C9JUS6 153 aa12.2□□□□□ -0.46
THBS3-206ENST00000469769 CTNND1O60716 968 aaKnown RBP12.2□□□□□ -0.46
THBS3-206ENST00000469769 ME3Q16798 604 aa12.2□□□□□ -0.46
THBS3-206ENST00000469769 EAPPQ56P03 285 aaPredicted RBP12.2□□□□□ -0.46
THBS3-206ENST00000469769 MIGA2Q7L4E1 593 aa12.2□□□□□ -0.46
THBS3-206ENST00000469769 CEP95Q96GE4 821 aa12.2□□□□□ -0.46
THBS3-206ENST00000469769 TMX3Q96JJ7 454 aa12.2□□□□□ -0.46
THBS3-206ENST00000469769 MAP3K14Q99558 947 aa12.2□□□□□ -0.46
THBS3-206ENST00000469769 UBAC1Q9BSL1 405 aa12.2□□□□□ -0.46
THBS3-206ENST00000469769 TRIM34Q9BYJ4 488 aa12.2□□□□□ -0.46
THBS3-206ENST00000469769 ZNF341Q9BYN7 854 aa12.2□□□□□ -0.46
THBS3-206ENST00000469769 KANSL2Q9H9L4 492 aa12.2□□□□□ -0.46
THBS3-206ENST00000469769 SENP2Q9HC62 589 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms