RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 USP17L12C9JPN9 530 aa16.89■□□□□ 0.29
CBWD3-205ENST00000469687 USP17L21D6R901 530 aa16.89■□□□□ 0.29
CBWD3-205ENST00000469687 BMP6P22004 513 aa16.89■□□□□ 0.29
CBWD3-205ENST00000469687 PRDX5P30044 214 aa16.89■□□□□ 0.29
CBWD3-205ENST00000469687 PKN1Q16512 942 aa16.89■□□□□ 0.29
CBWD3-205ENST00000469687 TMC6Q7Z403 805 aa16.89■□□□□ 0.29
CBWD3-205ENST00000469687 C8orf37Q96NL8 207 aa16.89■□□□□ 0.29
CBWD3-205ENST00000469687 PCDHA5Q9Y5H7 936 aa16.89■□□□□ 0.29
CBWD3-205ENST00000469687 BTAF1O14981 1849 aa16.89■□□□□ 0.29
CBWD3-205ENST00000469687 GNPATO15228 680 aa16.88■□□□□ 0.29
CBWD3-205ENST00000469687 NMT2O60551 498 aa16.88■□□□□ 0.29
CBWD3-205ENST00000469687 PTPREP23469 700 aa16.88■□□□□ 0.29
CBWD3-205ENST00000469687 RCAN1P53805 252 aa16.88■□□□□ 0.29
CBWD3-205ENST00000469687 FUT2Q10981 343 aa16.88■□□□□ 0.29
CBWD3-205ENST00000469687 IFIT1BQ5T764 474 aaKnown RBP16.88■□□□□ 0.29
CBWD3-205ENST00000469687 USP49Q70CQ1 688 aa16.88■□□□□ 0.29
CBWD3-205ENST00000469687 BRIP1Q9BX63 1249 aa16.88■□□□□ 0.29
CBWD3-205ENST00000469687 OSBPL5Q9H0X9 879 aaPredicted RBP16.88■□□□□ 0.29
CBWD3-205ENST00000469687 COL24A1Q17RW2 1714 aa16.88■□□□□ 0.29
CBWD3-205ENST00000469687 NEMFO60524 1076 aa16.88■□□□□ 0.29
CBWD3-205ENST00000469687 RILPL1Q5EBL4 403 aa16.88■□□□□ 0.29
CBWD3-205ENST00000469687 ARMCX5Q6P1M9 558 aa16.88■□□□□ 0.29
CBWD3-205ENST00000469687 NBPF5PQ86XG9 351 aaPredicted RBP16.88■□□□□ 0.29
CBWD3-205ENST00000469687 DPF2Q92785 391 aa16.88■□□□□ 0.29
CBWD3-205ENST00000469687 SETDB2Q96T68 719 aa16.88■□□□□ 0.29
CBWD3-205ENST00000469687 RNF26Q9BY78 433 aaPredicted RBP16.88■□□□□ 0.29
CBWD3-205ENST00000469687 TRMT1Q9NXH9 659 aaKnown RBP16.88■□□□□ 0.29
CBWD3-205ENST00000469687 NARFQ9UHQ1 456 aa16.88■□□□□ 0.29
CBWD3-205ENST00000469687 SMTNL1A8MU46 457 aa16.87■□□□□ 0.29
CBWD3-205ENST00000469687 IKBKBO14920 756 aa16.87■□□□□ 0.29
CBWD3-205ENST00000469687 POLR2DO15514 142 aaKnown RBP16.87■□□□□ 0.29
CBWD3-205ENST00000469687 PRR29P0C7W0 189 aa16.87■□□□□ 0.29
CBWD3-205ENST00000469687 CYP2D6P10635 497 aa16.87■□□□□ 0.29
CBWD3-205ENST00000469687 FANCCQ00597 558 aa16.87■□□□□ 0.29
CBWD3-205ENST00000469687 MDM2Q00987 491 aaPredicted RBP16.87■□□□□ 0.29
CBWD3-205ENST00000469687 PDE4BQ07343 736 aa16.87■□□□□ 0.29
CBWD3-205ENST00000469687 PTPN21Q16825 1174 aa16.87■□□□□ 0.29
CBWD3-205ENST00000469687 SLC4A8Q2Y0W8 1093 aa16.87■□□□□ 0.29
CBWD3-205ENST00000469687 GRAMD1CQ8IYS0 662 aa16.87■□□□□ 0.29
CBWD3-205ENST00000469687 NLRP3Q96P20 1036 aa16.87■□□□□ 0.29
CBWD3-205ENST00000469687 CCDC88AQ3V6T2 1871 aa16.87■□□□□ 0.29
CBWD3-205ENST00000469687 WNT7AO00755 349 aa16.87■□□□□ 0.29
CBWD3-205ENST00000469687 TROAPQ12815 778 aa16.87■□□□□ 0.29
CBWD3-205ENST00000469687 NOM1Q5C9Z4 860 aaKnown RBP16.87■□□□□ 0.29
CBWD3-205ENST00000469687 PDILTQ8N807 584 aa16.87■□□□□ 0.29
CBWD3-205ENST00000469687 V9GY48 417 aaPredicted RBP16.87■□□□□ 0.29
CBWD3-205ENST00000469687 LAMB1P07942 1786 aa16.86■□□□□ 0.29
CBWD3-205ENST00000469687 FGRP09769 529 aa16.86■□□□□ 0.29
CBWD3-205ENST00000469687 HIBADHP31937 336 aaKnown RBP16.86■□□□□ 0.29
CBWD3-205ENST00000469687 FAM47AQ5JRC9 791 aa16.86■□□□□ 0.29
CBWD3-205ENST00000469687 DCP1AQ9NPI6 582 aaPredicted RBP16.86■□□□□ 0.29
CBWD3-205ENST00000469687 SERTAD1Q9UHV2 236 aa16.86■□□□□ 0.29
CBWD3-205ENST00000469687 TNRC6CQ9HCJ0 1690 aaKnown RBP16.86■□□□□ 0.29
CBWD3-205ENST00000469687 CATIPQ7Z7H3 387 aa16.85■□□□□ 0.29
CBWD3-205ENST00000469687 IQCA1Q86XH1 822 aa16.85■□□□□ 0.29
CBWD3-205ENST00000469687 ZNF592Q92610 1267 aa16.85■□□□□ 0.29
CBWD3-205ENST00000469687 NGLY1Q96IV0 654 aa16.85■□□□□ 0.29
CBWD3-205ENST00000469687 RPS6KA4O75676 772 aa16.85■□□□□ 0.29
CBWD3-205ENST00000469687 GSDMDP57764 484 aa16.85■□□□□ 0.29
CBWD3-205ENST00000469687 TPM4P67936 248 aa16.85■□□□□ 0.29
CBWD3-205ENST00000469687 AKAP17AQ02040 695 aaKnown RBP16.85■□□□□ 0.29
CBWD3-205ENST00000469687 MYL5Q02045 173 aa16.85■□□□□ 0.29
CBWD3-205ENST00000469687 ZNF827Q17R98 1081 aa16.85■□□□□ 0.29
CBWD3-205ENST00000469687 HSP90AA4PQ58FG1 418 aa16.85■□□□□ 0.29
CBWD3-205ENST00000469687 PHF20Q9BVI0 1012 aa16.85■□□□□ 0.29
CBWD3-205ENST00000469687 NYXQ9GZU5 481 aa16.85■□□□□ 0.29
CBWD3-205ENST00000469687 CSRNP2Q9H175 543 aa16.85■□□□□ 0.29
CBWD3-205ENST00000469687 IMPACTQ9P2X3 320 aa16.85■□□□□ 0.29
CBWD3-205ENST00000469687 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.85■□□□□ 0.29
CBWD3-205ENST00000469687 KIAA1551Q9HCM1 1747 aa16.85■□□□□ 0.29
CBWD3-205ENST00000469687 EP400Q96L91 3159 aa16.85■□□□□ 0.29
CBWD3-205ENST00000469687 CTIFO43310 598 aaKnown RBP16.84■□□□□ 0.29
CBWD3-205ENST00000469687 ZPR1O75312 459 aa16.84■□□□□ 0.29
CBWD3-205ENST00000469687 TM4SF1P30408 202 aa16.84■□□□□ 0.29
CBWD3-205ENST00000469687 NYAP1Q6ZVC0 841 aa16.84■□□□□ 0.29
CBWD3-205ENST00000469687 CCAR2Q8N163 923 aaKnown RBP16.84■□□□□ 0.29
CBWD3-205ENST00000469687 MAP7D2Q96T17 732 aa16.84■□□□□ 0.29
CBWD3-205ENST00000469687 BCL11BQ9C0K0 894 aaPredicted RBP16.84■□□□□ 0.29
CBWD3-205ENST00000469687 FANCLQ9NW38 375 aa16.84■□□□□ 0.29
CBWD3-205ENST00000469687 MAN1B1Q9UKM7 699 aa16.84■□□□□ 0.29
CBWD3-205ENST00000469687 SRPRBQ9Y5M8 271 aaKnown RBP16.84■□□□□ 0.29
CBWD3-205ENST00000469687 SBF2Q86WG5 1849 aa16.84■□□□□ 0.29
CBWD3-205ENST00000469687 PRPF3O43395 683 aaKnown RBP16.84■□□□□ 0.29
CBWD3-205ENST00000469687 POSTNQ15063 836 aa16.84■□□□□ 0.29
CBWD3-205ENST00000469687 VPS72Q15906 364 aa16.84■□□□□ 0.29
CBWD3-205ENST00000469687 CEP135Q66GS9 1140 aa16.84■□□□□ 0.29
CBWD3-205ENST00000469687 A0A087X0B3 334 aa16.83■□□□□ 0.28
CBWD3-205ENST00000469687 SEMA3EO15041 775 aa16.83■□□□□ 0.28
CBWD3-205ENST00000469687 VEGFAP15692 232 aaPredicted RBP16.83■□□□□ 0.28
CBWD3-205ENST00000469687 NPY5RQ15761 445 aa16.83■□□□□ 0.28
CBWD3-205ENST00000469687 OLFM4Q6UX06 510 aa16.83■□□□□ 0.28
CBWD3-205ENST00000469687 ARHGEF1Q92888 912 aaKnown RBP16.83■□□□□ 0.28
CBWD3-205ENST00000469687 CCNL1Q9UK58 526 aaPredicted RBP16.83■□□□□ 0.28
CBWD3-205ENST00000469687 CNTNAP5Q8WYK1 1306 aa16.83■□□□□ 0.28
CBWD3-205ENST00000469687 TMEM232C9JQI7 657 aa16.82■□□□□ 0.28
CBWD3-205ENST00000469687 ADAMTS3O15072 1205 aa16.82■□□□□ 0.28
CBWD3-205ENST00000469687 ACTN4O43707 911 aaKnown RBP16.82■□□□□ 0.28
CBWD3-205ENST00000469687 KRT2P35908 639 aa16.82■□□□□ 0.28
CBWD3-205ENST00000469687 UBASH3AP57075 661 aa16.82■□□□□ 0.28
CBWD3-205ENST00000469687 FMR1Q06787 632 aaKnown RBP eCLIP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms