RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 ASB11Q8WXH4 323 aa7.86□□□□□ -1.15
VPS8-219ENST00000469479 EHD4Q9H223 541 aa7.86□□□□□ -1.15
VPS8-219ENST00000469479 TNKS2Q9H2K2 1166 aa7.86□□□□□ -1.15
VPS8-219ENST00000469479 KRT82Q9NSB4 513 aa7.86□□□□□ -1.15
VPS8-219ENST00000469479 CDK11AQ9UQ88 783 aaPredicted RBP7.86□□□□□ -1.15
VPS8-219ENST00000469479 U3KQE9 123 aa7.86□□□□□ -1.15
VPS8-219ENST00000469479 CPS1P31327 1500 aa7.86□□□□□ -1.15
VPS8-219ENST00000469479 MLH3Q9UHC1 1453 aa7.86□□□□□ -1.15
VPS8-219ENST00000469479 PTPRKQ15262 1439 aa7.86□□□□□ -1.15
VPS8-219ENST00000469479 ZNF503-AS2A6NEH8 195 aa7.85□□□□□ -1.15
VPS8-219ENST00000469479 LEFTY1O75610 366 aa7.85□□□□□ -1.15
VPS8-219ENST00000469479 KIF4BQ2VIQ3 1234 aa7.85□□□□□ -1.15
VPS8-219ENST00000469479 LCNL1Q6ZST4 164 aa7.85□□□□□ -1.15
VPS8-219ENST00000469479 CCDC97Q96F63 343 aaPredicted RBP7.85□□□□□ -1.15
VPS8-219ENST00000469479 WDR89Q96FK6 387 aaPredicted RBP7.85□□□□□ -1.15
VPS8-219ENST00000469479 TCOF1Q13428 1488 aaKnown RBP7.85□□□□□ -1.15
VPS8-219ENST00000469479 DIP2CQ9Y2E4 1556 aa7.84□□□□□ -1.15
VPS8-219ENST00000469479 TTLL4Q14679 1199 aa7.84□□□□□ -1.15
VPS8-219ENST00000469479 LRRC56Q8IYG6 542 aaPredicted RBP7.84□□□□□ -1.15
VPS8-219ENST00000469479 MROH2AA6NES4 1674 aa7.83□□□□□ -1.16
VPS8-219ENST00000469479 ZSCAN22P10073 491 aaPredicted RBP7.83□□□□□ -1.16
VPS8-219ENST00000469479 AFMP43652 599 aa7.83□□□□□ -1.16
VPS8-219ENST00000469479 ANKLE2Q86XL3 938 aa7.83□□□□□ -1.16
VPS8-219ENST00000469479 C1QL4Q86Z23 238 aa7.83□□□□□ -1.16
VPS8-219ENST00000469479 SERPINA10Q9UK55 444 aa7.83□□□□□ -1.16
VPS8-219ENST00000469479 ZNF862O60290 1169 aa7.82□□□□□ -1.16
VPS8-219ENST00000469479 HCLS1P14317 486 aaPredicted RBP7.82□□□□□ -1.16
VPS8-219ENST00000469479 TTLL10Q6ZVT0 673 aa7.82□□□□□ -1.16
VPS8-219ENST00000469479 LMCD1Q9NZU5 365 aa7.82□□□□□ -1.16
VPS8-219ENST00000469479 RAPGEFL1Q9UHV5 662 aa7.82□□□□□ -1.16
VPS8-219ENST00000469479 PCDHGC5Q9Y5F6 944 aa7.82□□□□□ -1.16
VPS8-219ENST00000469479 ZNF142P52746 1687 aaPredicted RBP7.82□□□□□ -1.16
VPS8-219ENST00000469479 MYO5CQ9NQX4 1742 aa7.81□□□□□ -1.16
VPS8-219ENST00000469479 CLIP1P30622 1438 aa7.81□□□□□ -1.16
VPS8-219ENST00000469479 GSTP1P09211 210 aaKnown RBP7.81□□□□□ -1.16
VPS8-219ENST00000469479 ITIH2P19823 946 aa7.81□□□□□ -1.16
VPS8-219ENST00000469479 ZP2Q05996 745 aa7.81□□□□□ -1.16
VPS8-219ENST00000469479 USPL1Q5W0Q7 1092 aa7.81□□□□□ -1.16
VPS8-219ENST00000469479 PRPF40BQ6NWY9 871 aaKnown RBP7.81□□□□□ -1.16
VPS8-219ENST00000469479 AFAP1Q8N556 730 aa7.81□□□□□ -1.16
VPS8-219ENST00000469479 ZC3H12CQ9C0D7 883 aaKnown RBP7.81□□□□□ -1.16
VPS8-219ENST00000469479 SSU72Q9NP77 194 aaKnown RBP7.81□□□□□ -1.16
VPS8-219ENST00000469479 GTF2IRD1Q9UHL9 959 aa7.81□□□□□ -1.16
VPS8-219ENST00000469479 CTNND2Q9UQB3 1225 aa7.81□□□□□ -1.16
VPS8-219ENST00000469479 ARHGAP5Q13017 1502 aa7.81□□□□□ -1.16
VPS8-219ENST00000469479 IGF2BP3O00425 579 aaKnown RBP eCLIP7.8□□□□□ -1.16
VPS8-219ENST00000469479 CPNE3O75131 537 aaKnown RBP7.8□□□□□ -1.16
VPS8-219ENST00000469479 IKZF1Q13422 519 aa7.8□□□□□ -1.16
VPS8-219ENST00000469479 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.8□□□□□ -1.16
VPS8-219ENST00000469479 TOP6BLQ8N6T0 577 aa7.8□□□□□ -1.16
VPS8-219ENST00000469479 LIN37Q96GY3 246 aaPredicted RBP7.8□□□□□ -1.16
VPS8-219ENST00000469479 ABCB6Q9NP58 842 aa7.8□□□□□ -1.16
VPS8-219ENST00000469479 PRDM7Q9NQW5 492 aa7.8□□□□□ -1.16
VPS8-219ENST00000469479 KIF14Q15058 1648 aa7.8□□□□□ -1.16
VPS8-219ENST00000469479 ZMYM3Q14202 1370 aa7.8□□□□□ -1.16
VPS8-219ENST00000469479 CEP170BQ9Y4F5 1589 aaPredicted RBP7.8□□□□□ -1.16
VPS8-219ENST00000469479 ABCA6Q8N139 1617 aa7.79□□□□□ -1.16
VPS8-219ENST00000469479 TMEM238LA0A1B0GVL6 79 aa7.79□□□□□ -1.16
VPS8-219ENST00000469479 ABL1P00519 1130 aa7.79□□□□□ -1.16
VPS8-219ENST00000469479 ECM1Q16610 540 aa7.79□□□□□ -1.16
VPS8-219ENST00000469479 SYDE1Q6ZW31 735 aaPredicted RBP7.79□□□□□ -1.16
VPS8-219ENST00000469479 HEXIM2Q96MH2 286 aaKnown RBP7.79□□□□□ -1.16
VPS8-219ENST00000469479 BRPF3Q9ULD4 1205 aa7.79□□□□□ -1.16
VPS8-219ENST00000469479 TRAK1Q9UPV9 953 aa7.79□□□□□ -1.16
VPS8-219ENST00000469479 SHANK2Q9UPX8 1470 aa7.79□□□□□ -1.16
VPS8-219ENST00000469479 MYO3AQ8NEV4 1616 aa7.78□□□□□ -1.16
VPS8-219ENST00000469479 TMEM88BA6NKF7 163 aa7.78□□□□□ -1.16
VPS8-219ENST00000469479 GLI1P08151 1106 aa7.78□□□□□ -1.16
VPS8-219ENST00000469479 PPP2R3AQ06190 1150 aa7.78□□□□□ -1.16
VPS8-219ENST00000469479 ISL2Q96A47 359 aa7.78□□□□□ -1.16
VPS8-219ENST00000469479 NPHS2Q9NP85 383 aa7.78□□□□□ -1.16
VPS8-219ENST00000469479 JAG2Q9Y219 1238 aa7.78□□□□□ -1.16
VPS8-219ENST00000469479 FMN1Q68DA7 1419 aa7.78□□□□□ -1.16
VPS8-219ENST00000469479 A2ML1A8K2U0 1454 aa7.77□□□□□ -1.17
VPS8-219ENST00000469479 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.77□□□□□ -1.17
VPS8-219ENST00000469479 NEFMP07197 916 aa7.77□□□□□ -1.17
VPS8-219ENST00000469479 ZNF157P51786 506 aaPredicted RBP7.77□□□□□ -1.17
VPS8-219ENST00000469479 PDE3BQ13370 1112 aa7.77□□□□□ -1.17
VPS8-219ENST00000469479 MPZL3Q6UWV2 235 aa7.77□□□□□ -1.17
VPS8-219ENST00000469479 FAM214BQ7L5A3 538 aa7.77□□□□□ -1.17
VPS8-219ENST00000469479 RNF214Q8ND24 703 aa7.77□□□□□ -1.17
VPS8-219ENST00000469479 CDK13Q14004 1512 aaKnown RBP7.77□□□□□ -1.17
VPS8-219ENST00000469479 TROQ12816 1431 aaPredicted RBP7.77□□□□□ -1.17
VPS8-219ENST00000469479 ERVK-24P63145 666 aa7.76□□□□□ -1.17
VPS8-219ENST00000469479 FAAP100Q0VG06 881 aa7.76□□□□□ -1.17
VPS8-219ENST00000469479 SPACA3Q8IXA5 215 aa7.76□□□□□ -1.17
VPS8-219ENST00000469479 KCNB2Q92953 911 aa7.76□□□□□ -1.17
VPS8-219ENST00000469479 ANO2Q9NQ90 1003 aa7.76□□□□□ -1.17
VPS8-219ENST00000469479 ABCC1P33527 1531 aa7.76□□□□□ -1.17
VPS8-219ENST00000469479 EEA1Q15075 1411 aa7.76□□□□□ -1.17
VPS8-219ENST00000469479 NFIBO00712 420 aa7.75□□□□□ -1.17
VPS8-219ENST00000469479 GADD45BO75293 160 aaPredicted RBP7.75□□□□□ -1.17
VPS8-219ENST00000469479 CLCN7P51798 805 aa7.75□□□□□ -1.17
VPS8-219ENST00000469479 ZNF211Q13398 564 aaPredicted RBP7.75□□□□□ -1.17
VPS8-219ENST00000469479 ZC3H12AQ5D1E8 599 aaKnown RBP7.75□□□□□ -1.17
VPS8-219ENST00000469479 TMEM67Q5HYA8 995 aa7.75□□□□□ -1.17
VPS8-219ENST00000469479 FYB2Q5VWT5 728 aa7.75□□□□□ -1.17
VPS8-219ENST00000469479 PRR23BQ6ZRT6 265 aa7.75□□□□□ -1.17
VPS8-219ENST00000469479 CYFIP1Q7L576 1253 aa7.75□□□□□ -1.17
VPS8-219ENST00000469479 KIRREL1Q96J84 757 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms