RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 BECN1Q14457 450 aa20.62■□□□□ 0.89
RPL39-202ENST00000468844 ZNF444Q8N0Y2 327 aaPredicted RBP20.62■□□□□ 0.89
RPL39-202ENST00000468844 IGDCC4Q8TDY8 1250 aa20.62■□□□□ 0.89
RPL39-202ENST00000468844 TMEM87BQ96K49 555 aa20.62■□□□□ 0.89
RPL39-202ENST00000468844 SH2B2O14492 632 aaPredicted RBP20.61■□□□□ 0.89
RPL39-202ENST00000468844 TFAP4Q01664 338 aa20.61■□□□□ 0.89
RPL39-202ENST00000468844 ANKRD1Q15327 319 aa20.61■□□□□ 0.89
RPL39-202ENST00000468844 IPO9Q96P70 1041 aaKnown RBP20.61■□□□□ 0.89
RPL39-202ENST00000468844 HERC5Q9UII4 1024 aaKnown RBP20.61■□□□□ 0.89
RPL39-202ENST00000468844 ANGEL1Q9UNK9 670 aaKnown RBP20.61■□□□□ 0.89
RPL39-202ENST00000468844 NMT2O60551 498 aa20.61■□□□□ 0.89
RPL39-202ENST00000468844 TNKSO95271 1327 aa20.61■□□□□ 0.89
RPL39-202ENST00000468844 TATDN1Q6P1N9 297 aa20.61■□□□□ 0.89
RPL39-202ENST00000468844 MTA3Q9BTC8 594 aa20.61■□□□□ 0.89
RPL39-202ENST00000468844 SENP2Q9HC62 589 aa20.61■□□□□ 0.89
RPL39-202ENST00000468844 TAOK2Q9UL54 1235 aa20.61■□□□□ 0.89
RPL39-202ENST00000468844 TPCN1Q9ULQ1 816 aa20.61■□□□□ 0.89
RPL39-202ENST00000468844 OTOFQ9HC10 1997 aa20.6■□□□□ 0.89
RPL39-202ENST00000468844 MYH6P13533 1939 aa20.6■□□□□ 0.89
RPL39-202ENST00000468844 DOCK1Q14185 1865 aa20.6■□□□□ 0.89
RPL39-202ENST00000468844 PLIN4Q96Q06 1357 aa20.6■□□□□ 0.89
RPL39-202ENST00000468844 IFIT3O14879 490 aaKnown RBP20.6■□□□□ 0.89
RPL39-202ENST00000468844 TSPY3P0CV98 308 aa20.6■□□□□ 0.89
RPL39-202ENST00000468844 TSPY8P0CW00 308 aa20.6■□□□□ 0.89
RPL39-202ENST00000468844 SLC4A3P48751 1232 aa20.6■□□□□ 0.89
RPL39-202ENST00000468844 IQCA1Q86XH1 822 aa20.6■□□□□ 0.89
RPL39-202ENST00000468844 TRIM34Q9BYJ4 488 aa20.6■□□□□ 0.89
RPL39-202ENST00000468844 LY9Q9HBG7 655 aa20.6■□□□□ 0.89
RPL39-202ENST00000468844 IL17RBQ9NRM6 502 aa20.6■□□□□ 0.89
RPL39-202ENST00000468844 LIMCH1Q9UPQ0 1083 aa20.6■□□□□ 0.89
RPL39-202ENST00000468844 LARGE1O95461 756 aa20.59■□□□□ 0.89
RPL39-202ENST00000468844 ENAHQ8N8S7 591 aaPredicted RBP20.59■□□□□ 0.89
RPL39-202ENST00000468844 ZC3H15Q8WU90 426 aaKnown RBP20.59■□□□□ 0.89
RPL39-202ENST00000468844 TMX3Q96JJ7 454 aa20.59■□□□□ 0.89
RPL39-202ENST00000468844 ZSCAN10Q96SZ4 725 aaPredicted RBP20.59■□□□□ 0.89
RPL39-202ENST00000468844 UBAC1Q9BSL1 405 aa20.59■□□□□ 0.89
RPL39-202ENST00000468844 BAZ2BQ9UIF8 2168 aaKnown RBP20.59■□□□□ 0.89
RPL39-202ENST00000468844 AKR1B1P15121 316 aa20.59■□□□□ 0.89
RPL39-202ENST00000468844 APOBRQ0VD83 1088 aa20.59■□□□□ 0.89
RPL39-202ENST00000468844 SART3Q15020 963 aaKnown RBP20.59■□□□□ 0.89
RPL39-202ENST00000468844 SEC23AQ15436 765 aa20.59■□□□□ 0.89
RPL39-202ENST00000468844 EAPPQ56P03 285 aaPredicted RBP20.59■□□□□ 0.89
RPL39-202ENST00000468844 TMEM67Q5HYA8 995 aa20.59■□□□□ 0.89
RPL39-202ENST00000468844 NBPF12Q5TAG4 269 aaPredicted RBP20.59■□□□□ 0.89
RPL39-202ENST00000468844 MIGA2Q7L4E1 593 aa20.59■□□□□ 0.89
RPL39-202ENST00000468844 PNMA8AQ86V59 439 aaPredicted RBP20.59■□□□□ 0.89
RPL39-202ENST00000468844 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.59■□□□□ 0.89
RPL39-202ENST00000468844 SSC5DA1L4H1 1573 aa20.58■□□□□ 0.89
RPL39-202ENST00000468844 PAPPA2Q9BXP8 1791 aa20.58■□□□□ 0.89
RPL39-202ENST00000468844 TBC1D12O60347 775 aa20.58■□□□□ 0.88
RPL39-202ENST00000468844 LIFRP42702 1097 aa20.58■□□□□ 0.88
RPL39-202ENST00000468844 MAP3K10Q02779 954 aa20.58■□□□□ 0.88
RPL39-202ENST00000468844 ME3Q16798 604 aa20.58■□□□□ 0.88
RPL39-202ENST00000468844 PRAMEF18Q5VWM3 479 aa20.58■□□□□ 0.88
RPL39-202ENST00000468844 NEDD1Q8NHV4 660 aa20.58■□□□□ 0.88
RPL39-202ENST00000468844 DCPSQ96C86 337 aaKnown RBP20.58■□□□□ 0.88
RPL39-202ENST00000468844 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.58■□□□□ 0.88
RPL39-202ENST00000468844 PPP2R3BQ9Y5P8 575 aa20.58■□□□□ 0.88
RPL39-202ENST00000468844 POTEIP0CG38 1075 aa20.57■□□□□ 0.88
RPL39-202ENST00000468844 POTEJP0CG39 1038 aa20.57■□□□□ 0.88
RPL39-202ENST00000468844 EVCP57679 992 aa20.57■□□□□ 0.88
RPL39-202ENST00000468844 WTAPQ15007 396 aa20.57■□□□□ 0.88
RPL39-202ENST00000468844 SGMS1Q86VZ5 419 aa20.57■□□□□ 0.88
RPL39-202ENST00000468844 RRAGCQ9HB90 399 aa20.57■□□□□ 0.88
RPL39-202ENST00000468844 ERICH2A1L162 156 aa20.57■□□□□ 0.88
RPL39-202ENST00000468844 RRP1BQ14684 758 aaKnown RBP20.57■□□□□ 0.88
RPL39-202ENST00000468844 SHROOM1Q2M3G4 852 aaPredicted RBP20.57■□□□□ 0.88
RPL39-202ENST00000468844 CERKLQ49MI3 558 aaPredicted RBP20.57■□□□□ 0.88
RPL39-202ENST00000468844 RCSD1Q6JBY9 416 aa20.57■□□□□ 0.88
RPL39-202ENST00000468844 TCP11L1Q9NUJ3 509 aa20.57■□□□□ 0.88
RPL39-202ENST00000468844 BRPF3Q9ULD4 1205 aa20.57■□□□□ 0.88
RPL39-202ENST00000468844 ADM5C9JUS6 153 aa20.56■□□□□ 0.88
RPL39-202ENST00000468844 VEGFAP15692 232 aaPredicted RBP20.56■□□□□ 0.88
RPL39-202ENST00000468844 DLK2Q6UY11 383 aa20.56■□□□□ 0.88
RPL39-202ENST00000468844 SULF1Q8IWU6 871 aa20.56■□□□□ 0.88
RPL39-202ENST00000468844 PHIPQ8WWQ0 1821 aa20.55■□□□□ 0.88
RPL39-202ENST00000468844 GDF11O95390 407 aa20.55■□□□□ 0.88
RPL39-202ENST00000468844 CEP95Q96GE4 821 aa20.55■□□□□ 0.88
RPL39-202ENST00000468844 CCDC17Q96LX7 622 aa20.55■□□□□ 0.88
RPL39-202ENST00000468844 KLF18A0A0U1RQI7 1052 aa20.55■□□□□ 0.88
RPL39-202ENST00000468844 KRT26Q7Z3Y9 468 aa20.55■□□□□ 0.88
RPL39-202ENST00000468844 NMRK2Q9NPI5 230 aa20.55■□□□□ 0.88
RPL39-202ENST00000468844 IGKV6D-41A0A0C4DH26 115 aa20.54■□□□□ 0.88
RPL39-202ENST00000468844 MPHOSPH10O00566 681 aaKnown RBP20.54■□□□□ 0.88
RPL39-202ENST00000468844 ST3GAL1Q11201 340 aa20.54■□□□□ 0.88
RPL39-202ENST00000468844 IFIT1BQ5T764 474 aaKnown RBP20.54■□□□□ 0.88
RPL39-202ENST00000468844 ZNF526Q8TF50 670 aaPredicted RBP20.54■□□□□ 0.88
RPL39-202ENST00000468844 ZSCAN31Q96LW9 406 aaPredicted RBP20.54■□□□□ 0.88
RPL39-202ENST00000468844 STX8Q9UNK0 236 aa20.54■□□□□ 0.88
RPL39-202ENST00000468844 JAG1P78504 1218 aa20.53■□□□□ 0.88
RPL39-202ENST00000468844 STK3Q13188 491 aa20.53■□□□□ 0.88
RPL39-202ENST00000468844 APOA5Q6Q788 366 aa20.53■□□□□ 0.88
RPL39-202ENST00000468844 DGKHQ86XP1 1220 aa20.53■□□□□ 0.88
RPL39-202ENST00000468844 CLEC10AQ8IUN9 316 aa20.53■□□□□ 0.88
RPL39-202ENST00000468844 ZNF274Q96GC6 653 aaPredicted RBP20.53■□□□□ 0.88
RPL39-202ENST00000468844 SH2B1Q9NRF2 756 aaPredicted RBP20.53■□□□□ 0.88
RPL39-202ENST00000468844 PHF20L1A8MW92 1017 aa20.53■□□□□ 0.88
RPL39-202ENST00000468844 PDIA3P30101 505 aaKnown RBP20.53■□□□□ 0.88
RPL39-202ENST00000468844 NOVP48745 357 aa20.53■□□□□ 0.88
RPL39-202ENST00000468844 ABCB5Q2M3G0 1257 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms