RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 JAG1P78504 1218 aa26.44■■□□□ 1.82
TTC28-204ENST00000468807 PDE3AQ14432 1141 aa26.44■■□□□ 1.82
TTC28-204ENST00000468807 TMED8Q6PL24 325 aaPredicted RBP26.44■■□□□ 1.82
TTC28-204ENST00000468807 METTL16Q86W50 562 aaKnown RBP26.44■■□□□ 1.82
TTC28-204ENST00000468807 TMOD4Q9NZQ9 345 aa26.44■■□□□ 1.82
TTC28-204ENST00000468807 GABRQQ9UN88 632 aa26.44■■□□□ 1.82
TTC28-204ENST00000468807 PDE6AP16499 860 aa26.43■■□□□ 1.82
TTC28-204ENST00000468807 WDR18Q9BV38 432 aa26.43■■□□□ 1.82
TTC28-204ENST00000468807 ZBTB21Q9ULJ3 1066 aa26.43■■□□□ 1.82
TTC28-204ENST00000468807 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.42■■□□□ 1.82
TTC28-204ENST00000468807 BACE1P56817 501 aa26.41■■□□□ 1.82
TTC28-204ENST00000468807 MTFR1Q15390 333 aa26.41■■□□□ 1.82
TTC28-204ENST00000468807 SH3D19Q5HYK7 790 aa26.41■■□□□ 1.82
TTC28-204ENST00000468807 TTC6Q86TZ1 520 aa26.41■■□□□ 1.82
TTC28-204ENST00000468807 EDC3Q96F86 508 aaKnown RBP26.41■■□□□ 1.82
TTC28-204ENST00000468807 ASCC2Q9H1I8 757 aaPredicted RBP26.41■■□□□ 1.82
TTC28-204ENST00000468807 BOLA2Q9H3K6 86 aa26.41■■□□□ 1.82
TTC28-204ENST00000468807 SERPINB13Q9UIV8 391 aa26.41■■□□□ 1.82
TTC28-204ENST00000468807 TAOK2Q9UL54 1235 aa26.41■■□□□ 1.82
TTC28-204ENST00000468807 ZNF532Q9HCE3 1301 aa26.4■■□□□ 1.82
TTC28-204ENST00000468807 GH2P01242 217 aa26.4■■□□□ 1.82
TTC28-204ENST00000468807 IRX3P78415 501 aaPredicted RBP26.4■■□□□ 1.82
TTC28-204ENST00000468807 FAM110CQ1W6H9 321 aa26.4■■□□□ 1.82
TTC28-204ENST00000468807 RIOK1Q9BRS2 568 aaKnown RBP26.4■■□□□ 1.82
TTC28-204ENST00000468807 GINM1Q9NU53 330 aa26.4■■□□□ 1.82
TTC28-204ENST00000468807 NAV1Q8NEY1 1877 aa26.4■■□□□ 1.82
TTC28-204ENST00000468807 USP17L10C9JJH3 530 aa26.39■■□□□ 1.82
TTC28-204ENST00000468807 POLR3DP05423 398 aaPredicted RBP26.39■■□□□ 1.82
TTC28-204ENST00000468807 GCLCP48506 637 aaPredicted RBP26.39■■□□□ 1.82
TTC28-204ENST00000468807 FLT3LGP49771 235 aa26.39■■□□□ 1.82
TTC28-204ENST00000468807 SLAIN1Q8ND83 568 aa26.39■■□□□ 1.82
TTC28-204ENST00000468807 CRNKL1Q9BZJ0 848 aaKnown RBP26.39■■□□□ 1.82
TTC28-204ENST00000468807 UBXN2AP68543 259 aa26.38■■□□□ 1.81
TTC28-204ENST00000468807 COA7Q96BR5 231 aa26.38■■□□□ 1.81
TTC28-204ENST00000468807 LRRCC1Q9C099 1032 aa26.38■■□□□ 1.81
TTC28-204ENST00000468807 PAG1Q9NWQ8 432 aa26.38■■□□□ 1.81
TTC28-204ENST00000468807 C19orf81C9J6K1 198 aa26.37■■□□□ 1.81
TTC28-204ENST00000468807 SMARCA5O60264 1052 aaPredicted RBP26.37■■□□□ 1.81
TTC28-204ENST00000468807 ADCY3O60266 1144 aa26.37■■□□□ 1.81
TTC28-204ENST00000468807 FEZ1Q99689 392 aa26.37■■□□□ 1.81
TTC28-204ENST00000468807 EHD4Q9H223 541 aa26.37■■□□□ 1.81
TTC28-204ENST00000468807 DOCK3Q8IZD9 2030 aa26.36■■□□□ 1.81
TTC28-204ENST00000468807 CCL5P13501 91 aa26.36■■□□□ 1.81
TTC28-204ENST00000468807 ELNP15502 786 aa26.36■■□□□ 1.81
TTC28-204ENST00000468807 PLCD1P51178 756 aa26.36■■□□□ 1.81
TTC28-204ENST00000468807 RAB3GAP1Q15042 981 aa26.36■■□□□ 1.81
TTC28-204ENST00000468807 ZYXQ15942 572 aaKnown RBP26.36■■□□□ 1.81
TTC28-204ENST00000468807 CERKLQ49MI3 558 aaPredicted RBP26.36■■□□□ 1.81
TTC28-204ENST00000468807 TATDN1Q6P1N9 297 aa26.36■■□□□ 1.81
TTC28-204ENST00000468807 RNF208Q9H0X6 261 aa26.36■■□□□ 1.81
TTC28-204ENST00000468807 MCM9Q9NXL9 1143 aa26.36■■□□□ 1.81
TTC28-204ENST00000468807 ATP5JP18859 108 aa26.35■■□□□ 1.81
TTC28-204ENST00000468807 LCORLQ8N3X6 602 aa26.35■■□□□ 1.81
TTC28-204ENST00000468807 SDR42E1Q8WUS8 393 aa26.35■■□□□ 1.81
TTC28-204ENST00000468807 DDX60LQ5H9U9 1706 aaKnown RBP26.34■■□□□ 1.81
TTC28-204ENST00000468807 TCRBV5S4A2TA0A5A2 114 aa26.34■■□□□ 1.81
TTC28-204ENST00000468807 ABCB5Q2M3G0 1257 aa26.34■■□□□ 1.81
TTC28-204ENST00000468807 SLFNL1Q499Z3 407 aa26.34■■□□□ 1.81
TTC28-204ENST00000468807 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.34■■□□□ 1.81
TTC28-204ENST00000468807 ARMT1Q9H993 441 aa26.34■■□□□ 1.81
TTC28-204ENST00000468807 CABP5Q9NP86 173 aa26.34■■□□□ 1.81
TTC28-204ENST00000468807 USP17L2Q6R6M4 530 aa26.33■■□□□ 1.81
TTC28-204ENST00000468807 P2RX7Q99572 595 aaKnown RBP26.33■■□□□ 1.81
TTC28-204ENST00000468807 HAUS7Q99871 368 aa26.33■■□□□ 1.81
TTC28-204ENST00000468807 INHAP05111 366 aa26.32■■□□□ 1.8
TTC28-204ENST00000468807 HOXA7P31268 230 aaPredicted RBP26.32■■□□□ 1.8
TTC28-204ENST00000468807 ADD2P35612 726 aa26.32■■□□□ 1.8
TTC28-204ENST00000468807 HERVK_113P62684 666 aa26.32■■□□□ 1.8
TTC28-204ENST00000468807 IRF5Q13568 498 aa26.32■■□□□ 1.8
TTC28-204ENST00000468807 NKX2-3Q8TAU0 364 aa26.32■■□□□ 1.8
TTC28-204ENST00000468807 UNC93B1Q9H1C4 597 aa26.32■■□□□ 1.8
TTC28-204ENST00000468807 EMILIN3Q9NT22 766 aa26.32■■□□□ 1.8
TTC28-204ENST00000468807 PEX10O60683 326 aa26.31■■□□□ 1.8
TTC28-204ENST00000468807 MBD4O95243 580 aa26.31■■□□□ 1.8
TTC28-204ENST00000468807 SHMT1P34896 483 aa26.31■■□□□ 1.8
TTC28-204ENST00000468807 PXYLP1Q8TE99 480 aa26.31■■□□□ 1.8
TTC28-204ENST00000468807 MYH7P12883 1935 aa26.3■■□□□ 1.8
TTC28-204ENST00000468807 MPHOSPH10O00566 681 aaKnown RBP26.3■■□□□ 1.8
TTC28-204ENST00000468807 GJB1P08034 283 aa26.3■■□□□ 1.8
TTC28-204ENST00000468807 EVX2Q03828 476 aa26.3■■□□□ 1.8
TTC28-204ENST00000468807 SHISA4Q96DD7 197 aa26.3■■□□□ 1.8
TTC28-204ENST00000468807 DCP1AQ9NPI6 582 aaPredicted RBP26.3■■□□□ 1.8
TTC28-204ENST00000468807 CYP2D6P10635 497 aa26.29■■□□□ 1.8
TTC28-204ENST00000468807 GJA8P48165 433 aa26.29■■□□□ 1.8
TTC28-204ENST00000468807 GPRC5AQ8NFJ5 357 aa26.29■■□□□ 1.8
TTC28-204ENST00000468807 PAGR1Q9BTK6 254 aa26.29■■□□□ 1.8
TTC28-204ENST00000468807 MORF4L1Q9UBU8 362 aa26.29■■□□□ 1.8
TTC28-204ENST00000468807 PRKAB2O43741 272 aa26.28■■□□□ 1.8
TTC28-204ENST00000468807 CHGBP05060 677 aa26.28■■□□□ 1.8
TTC28-204ENST00000468807 CCAR1Q8IX12 1150 aaKnown RBP26.28■■□□□ 1.8
TTC28-204ENST00000468807 ACER1Q8TDN7 264 aa26.28■■□□□ 1.8
TTC28-204ENST00000468807 TXNRD2Q9NNW7 524 aa26.28■■□□□ 1.8
TTC28-204ENST00000468807 BAZ2AQ9UIF9 1905 aaKnown RBP26.27■■□□□ 1.8
TTC28-204ENST00000468807 USP14P54578 494 aa26.27■■□□□ 1.8
TTC28-204ENST00000468807 ECHDC1Q9NTX5 307 aa26.27■■□□□ 1.8
TTC28-204ENST00000468807 MYH8P13535 1937 aa26.26■■□□□ 1.79
TTC28-204ENST00000468807 SLC34A2O95436 690 aa26.26■■□□□ 1.79
TTC28-204ENST00000468807 GABPAQ06546 454 aa26.26■■□□□ 1.79
TTC28-204ENST00000468807 SEPT2Q15019 361 aa26.26■■□□□ 1.79
TTC28-204ENST00000468807 ZSCAN25Q6NSZ9 544 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms