RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 MAST2Q6P0Q8 1798 aa8.68□□□□□ -1.02
SNRPD3-205ENST00000468770 KIAA0100Q14667 2235 aaKnown RBP8.68□□□□□ -1.02
SNRPD3-205ENST00000468770 USP17L10C9JJH3 530 aa8.68□□□□□ -1.02
SNRPD3-205ENST00000468770 GH2P01242 217 aa8.68□□□□□ -1.02
SNRPD3-205ENST00000468770 GCLCP48506 637 aaPredicted RBP8.68□□□□□ -1.02
SNRPD3-205ENST00000468770 PLCD1P51178 756 aa8.68□□□□□ -1.02
SNRPD3-205ENST00000468770 JAG1P78504 1218 aa8.68□□□□□ -1.02
SNRPD3-205ENST00000468770 CERKLQ49MI3 558 aaPredicted RBP8.68□□□□□ -1.02
SNRPD3-205ENST00000468770 TATDN1Q6P1N9 297 aa8.68□□□□□ -1.02
SNRPD3-205ENST00000468770 POTEDQ86YR6 584 aa8.68□□□□□ -1.02
SNRPD3-205ENST00000468770 YTHDC1Q96MU7 727 aaKnown RBP8.68□□□□□ -1.02
SNRPD3-205ENST00000468770 EHD4Q9H223 541 aa8.68□□□□□ -1.02
SNRPD3-205ENST00000468770 CABP5Q9NP86 173 aa8.68□□□□□ -1.02
SNRPD3-205ENST00000468770 ECHDC1Q9NTX5 307 aa8.68□□□□□ -1.02
SNRPD3-205ENST00000468770 BIN2Q9UBW5 565 aaPredicted RBP8.68□□□□□ -1.02
SNRPD3-205ENST00000468770 ZBTB21Q9ULJ3 1066 aa8.68□□□□□ -1.02
SNRPD3-205ENST00000468770 MYPNQ86TC9 1320 aa8.68□□□□□ -1.02
SNRPD3-205ENST00000468770 TCRBV5S4A2TA0A5A2 114 aa8.67□□□□□ -1.02
SNRPD3-205ENST00000468770 TNPO2O14787 897 aaKnown RBP8.67□□□□□ -1.02
SNRPD3-205ENST00000468770 EN2P19622 333 aaPredicted RBP8.67□□□□□ -1.02
SNRPD3-205ENST00000468770 GRK4P32298 578 aa8.67□□□□□ -1.02
SNRPD3-205ENST00000468770 ADD2P35612 726 aa8.67□□□□□ -1.02
SNRPD3-205ENST00000468770 IRX3P78415 501 aaPredicted RBP8.67□□□□□ -1.02
SNRPD3-205ENST00000468770 PRKCZQ05513 592 aa8.67□□□□□ -1.02
SNRPD3-205ENST00000468770 RAB3GAP1Q15042 981 aa8.67□□□□□ -1.02
SNRPD3-205ENST00000468770 ABCB5Q2M3G0 1257 aa8.67□□□□□ -1.02
SNRPD3-205ENST00000468770 SHROOM1Q2M3G4 852 aaPredicted RBP8.67□□□□□ -1.02
SNRPD3-205ENST00000468770 ZSCAN25Q6NSZ9 544 aa8.67□□□□□ -1.02
SNRPD3-205ENST00000468770 LCORLQ8N3X6 602 aa8.67□□□□□ -1.02
SNRPD3-205ENST00000468770 SDR42E1Q8WUS8 393 aa8.67□□□□□ -1.02
SNRPD3-205ENST00000468770 COA7Q96BR5 231 aa8.67□□□□□ -1.02
SNRPD3-205ENST00000468770 GPATCH3Q96I76 525 aa8.67□□□□□ -1.02
SNRPD3-205ENST00000468770 ASCC2Q9H1I8 757 aaPredicted RBP8.67□□□□□ -1.02
SNRPD3-205ENST00000468770 ARMT1Q9H993 441 aa8.67□□□□□ -1.02
SNRPD3-205ENST00000468770 DCP1AQ9NPI6 582 aaPredicted RBP8.67□□□□□ -1.02
SNRPD3-205ENST00000468770 PDE4DIPQ5VU43 2346 aa8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 PHIPQ8WWQ0 1821 aa8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 MBD4O95243 580 aa8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 HOXA7P31268 230 aaPredicted RBP8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 FLT3LGP49771 235 aa8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 RRP1P56182 461 aaKnown RBP8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 UBXN2AP68543 259 aa8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 UBE3CQ15386 1083 aa8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 FAM110CQ1W6H9 321 aa8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 SLFNL1Q499Z3 407 aa8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 USP17L2Q6R6M4 530 aa8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 AMOTL1Q8IY63 956 aa8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 DDRGK1Q96HY6 314 aa8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 P2RX7Q99572 595 aaKnown RBP8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 FEZ1Q99689 392 aa8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 EMILIN3Q9NT22 766 aa8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 ATP8A2Q9NTI2 1148 aa8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 TAOK2Q9UL54 1235 aa8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 GABRQQ9UN88 632 aa8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 PCDHB15Q9Y5E8 787 aa8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 MYH1P12882 1939 aa8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 CDK5RAP2Q96SN8 1893 aa8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 FOCADQ5VW36 1801 aa8.66□□□□□ -1.02
SNRPD3-205ENST00000468770 PTPRFP10586 1907 aa8.65□□□□□ -1.02
SNRPD3-205ENST00000468770 MPHOSPH10O00566 681 aaKnown RBP8.65□□□□□ -1.02
SNRPD3-205ENST00000468770 PRKAB2O43741 272 aa8.65□□□□□ -1.02
SNRPD3-205ENST00000468770 ADCY3O60266 1144 aa8.65□□□□□ -1.02
SNRPD3-205ENST00000468770 SHMT1P34896 483 aa8.65□□□□□ -1.02
SNRPD3-205ENST00000468770 USP14P54578 494 aa8.65□□□□□ -1.02
SNRPD3-205ENST00000468770 GABPAQ06546 454 aa8.65□□□□□ -1.02
SNRPD3-205ENST00000468770 MTFR1Q15390 333 aa8.65□□□□□ -1.02
SNRPD3-205ENST00000468770 ZYXQ15942 572 aaKnown RBP8.65□□□□□ -1.02
SNRPD3-205ENST00000468770 SLAIN1Q8ND83 568 aa8.65□□□□□ -1.02
SNRPD3-205ENST00000468770 GPRC5AQ8NFJ5 357 aa8.65□□□□□ -1.02
SNRPD3-205ENST00000468770 ZBTB47Q9UFB7 747 aaPredicted RBP8.65□□□□□ -1.02
SNRPD3-205ENST00000468770 SLC4A4Q9Y6R1 1079 aa8.65□□□□□ -1.02
SNRPD3-205ENST00000468770 ZSWIM8A7E2V4 1837 aa8.65□□□□□ -1.02
SNRPD3-205ENST00000468770 SIPA1L1O43166 1804 aa8.65□□□□□ -1.02
SNRPD3-205ENST00000468770 ATAD5Q96QE3 1844 aa8.65□□□□□ -1.02
SNRPD3-205ENST00000468770 CENPFP49454 3210 aa8.65□□□□□ -1.03
SNRPD3-205ENST00000468770 HTTP42858 3142 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 USP17L15C9J2P7 530 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 USP17L13C9JLJ4 530 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 USP17L11C9JVI0 530 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 USP17L18D6R9N7 530 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 USP17L22D6RA61 530 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 USP17L17D6RBQ6 530 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 USP17L19D6RCP7 530 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 USP17L20D6RJB6 530 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 ERC2O15083 957 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 CHGBP05060 677 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 CYP2D6P10635 497 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 CCL5P13501 91 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 HERVK_113P62684 666 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 USP17L24Q0WX57 530 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 IRF5Q13568 498 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 SEPT2Q15019 361 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 TSHZ3Q63HK5 1081 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 CCAR1Q8IX12 1150 aaKnown RBP8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 KBTBD3Q8NAB2 608 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 NKX2-3Q8TAU0 364 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 ACER1Q8TDN7 264 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 PXYLP1Q8TE99 480 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 GTF3C2Q8WUA4 911 aaPredicted RBP8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 KIAA1683Q9H0B3 1180 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms