RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 USP5P45974 858 aa17.97■□□□□ 0.47
ATPAF2-204ENST00000467560 BACE1P56817 501 aa17.97■□□□□ 0.47
ATPAF2-204ENST00000467560 CLASRPQ8N2M8 674 aaKnown RBP17.97■□□□□ 0.47
ATPAF2-204ENST00000467560 DNAJC2Q99543 621 aaKnown RBP17.97■□□□□ 0.47
ATPAF2-204ENST00000467560 TBC1D2Q9BYX2 928 aa17.97■□□□□ 0.47
ATPAF2-204ENST00000467560 TCRBV5S4A2TA0A5A2 114 aa17.96■□□□□ 0.47
ATPAF2-204ENST00000467560 TNPO2O14787 897 aaKnown RBP17.96■□□□□ 0.47
ATPAF2-204ENST00000467560 GH2P01242 217 aa17.96■□□□□ 0.47
ATPAF2-204ENST00000467560 CCL5P13501 91 aa17.96■□□□□ 0.47
ATPAF2-204ENST00000467560 PLCD1P51178 756 aa17.96■□□□□ 0.47
ATPAF2-204ENST00000467560 FAM110CQ1W6H9 321 aa17.96■□□□□ 0.47
ATPAF2-204ENST00000467560 SLC9C2Q5TAH2 1124 aa17.96■□□□□ 0.47
ATPAF2-204ENST00000467560 TATDN1Q6P1N9 297 aa17.96■□□□□ 0.47
ATPAF2-204ENST00000467560 POTEEQ6S8J3 1075 aa17.96■□□□□ 0.47
ATPAF2-204ENST00000467560 AS3MTQ9HBK9 375 aa17.96■□□□□ 0.47
ATPAF2-204ENST00000467560 PNMA3Q9UL41 463 aa17.96■□□□□ 0.47
ATPAF2-204ENST00000467560 ADCY3O60266 1144 aa17.95■□□□□ 0.46
ATPAF2-204ENST00000467560 HMMRO75330 724 aa17.95■□□□□ 0.46
ATPAF2-204ENST00000467560 HLA-DOAP06340 250 aa17.95■□□□□ 0.46
ATPAF2-204ENST00000467560 IFIT2P09913 472 aaKnown RBP17.95■□□□□ 0.46
ATPAF2-204ENST00000467560 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.95■□□□□ 0.46
ATPAF2-204ENST00000467560 P2RX7Q99572 595 aaKnown RBP17.95■□□□□ 0.46
ATPAF2-204ENST00000467560 TRIM34Q9BYJ4 488 aa17.95■□□□□ 0.46
ATPAF2-204ENST00000467560 UNC93B1Q9H1C4 597 aa17.95■□□□□ 0.46
ATPAF2-204ENST00000467560 EMILIN3Q9NT22 766 aa17.95■□□□□ 0.46
ATPAF2-204ENST00000467560 ZNF532Q9HCE3 1301 aa17.95■□□□□ 0.46
ATPAF2-204ENST00000467560 DOCK3Q8IZD9 2030 aa17.94■□□□□ 0.46
ATPAF2-204ENST00000467560 MAGEB6P1A0A0J9YX57 407 aa17.94■□□□□ 0.46
ATPAF2-204ENST00000467560 SMARCA5O60264 1052 aaPredicted RBP17.94■□□□□ 0.46
ATPAF2-204ENST00000467560 RAB11FIP3O75154 756 aa17.94■□□□□ 0.46
ATPAF2-204ENST00000467560 SHMT1P34896 483 aa17.94■□□□□ 0.46
ATPAF2-204ENST00000467560 LCORLQ8N3X6 602 aa17.94■□□□□ 0.46
ATPAF2-204ENST00000467560 SLAIN1Q8ND83 568 aa17.94■□□□□ 0.46
ATPAF2-204ENST00000467560 EHD4Q9H223 541 aa17.94■□□□□ 0.46
ATPAF2-204ENST00000467560 BOLA2Q9H3K6 86 aa17.94■□□□□ 0.46
ATPAF2-204ENST00000467560 TXNRD2Q9NNW7 524 aa17.94■□□□□ 0.46
ATPAF2-204ENST00000467560 BIN2Q9UBW5 565 aaPredicted RBP17.94■□□□□ 0.46
ATPAF2-204ENST00000467560 MYH1P12882 1939 aa17.94■□□□□ 0.46
ATPAF2-204ENST00000467560 DDX60LQ5H9U9 1706 aaKnown RBP17.93■□□□□ 0.46
ATPAF2-204ENST00000467560 USP17L10C9JJH3 530 aa17.93■□□□□ 0.46
ATPAF2-204ENST00000467560 GCLCP48506 637 aaPredicted RBP17.93■□□□□ 0.46
ATPAF2-204ENST00000467560 TTF1Q15361 905 aaPredicted RBP17.93■□□□□ 0.46
ATPAF2-204ENST00000467560 RNF208Q9H0X6 261 aa17.93■□□□□ 0.46
ATPAF2-204ENST00000467560 SERPINB13Q9UIV8 391 aa17.93■□□□□ 0.46
ATPAF2-204ENST00000467560 SMIM22K7EJ46 135 aa17.92■□□□□ 0.46
ATPAF2-204ENST00000467560 INHAP05111 366 aa17.92■□□□□ 0.46
ATPAF2-204ENST00000467560 GJB1P08034 283 aa17.92■□□□□ 0.46
ATPAF2-204ENST00000467560 CYP2D6P10635 497 aa17.92■□□□□ 0.46
ATPAF2-204ENST00000467560 HOXA7P31268 230 aaPredicted RBP17.92■□□□□ 0.46
ATPAF2-204ENST00000467560 GUCY1A2P33402 732 aa17.92■□□□□ 0.46
ATPAF2-204ENST00000467560 GJA8P48165 433 aa17.92■□□□□ 0.46
ATPAF2-204ENST00000467560 PABPC4Q13310 644 aaKnown RBP eCLIP17.92■□□□□ 0.46
ATPAF2-204ENST00000467560 IRF5Q13568 498 aa17.92■□□□□ 0.46
ATPAF2-204ENST00000467560 PDE3AQ14432 1141 aa17.92■□□□□ 0.46
ATPAF2-204ENST00000467560 UBE2Q1Q7Z7E8 422 aa17.92■□□□□ 0.46
ATPAF2-204ENST00000467560 ACER1Q8TDN7 264 aa17.92■□□□□ 0.46
ATPAF2-204ENST00000467560 SDR42E1Q8WUS8 393 aa17.92■□□□□ 0.46
ATPAF2-204ENST00000467560 GINM1Q9NU53 330 aa17.92■□□□□ 0.46
ATPAF2-204ENST00000467560 TMOD4Q9NZQ9 345 aa17.92■□□□□ 0.46
ATPAF2-204ENST00000467560 MORF4L1Q9UBU8 362 aa17.92■□□□□ 0.46
ATPAF2-204ENST00000467560 GJD2Q9UKL4 321 aa17.92■□□□□ 0.46
ATPAF2-204ENST00000467560 TAOK2Q9UL54 1235 aa17.92■□□□□ 0.46
ATPAF2-204ENST00000467560 RANBP2P49792 3224 aaKnown RBP17.92■□□□□ 0.46
ATPAF2-204ENST00000467560 C19orf81C9J6K1 198 aa17.91■□□□□ 0.46
ATPAF2-204ENST00000467560 PRKAB2O43741 272 aa17.91■□□□□ 0.46
ATPAF2-204ENST00000467560 ATP5JP18859 108 aa17.91■□□□□ 0.46
ATPAF2-204ENST00000467560 IRX3P78415 501 aaPredicted RBP17.91■□□□□ 0.46
ATPAF2-204ENST00000467560 GABPAQ06546 454 aa17.91■□□□□ 0.46
ATPAF2-204ENST00000467560 ZYXQ15942 572 aaKnown RBP17.91■□□□□ 0.46
ATPAF2-204ENST00000467560 TMED8Q6PL24 325 aaPredicted RBP17.91■□□□□ 0.46
ATPAF2-204ENST00000467560 CERS3Q8IU89 383 aa17.91■□□□□ 0.46
ATPAF2-204ENST00000467560 PXYLP1Q8TE99 480 aa17.91■□□□□ 0.46
ATPAF2-204ENST00000467560 ARMT1Q9H993 441 aa17.91■□□□□ 0.46
ATPAF2-204ENST00000467560 PAG1Q9NWQ8 432 aa17.91■□□□□ 0.46
ATPAF2-204ENST00000467560 RBPJLQ9UBG7 517 aa17.91■□□□□ 0.46
ATPAF2-204ENST00000467560 HERVK_113P62684 666 aa17.9■□□□□ 0.46
ATPAF2-204ENST00000467560 UBXN2AP68543 259 aa17.9■□□□□ 0.46
ATPAF2-204ENST00000467560 TRIM32Q13049 653 aa17.9■□□□□ 0.46
ATPAF2-204ENST00000467560 RAB3GAP1Q15042 981 aa17.9■□□□□ 0.46
ATPAF2-204ENST00000467560 Q3C1V9 767 aa17.9■□□□□ 0.46
ATPAF2-204ENST00000467560 CERKLQ49MI3 558 aaPredicted RBP17.9■□□□□ 0.46
ATPAF2-204ENST00000467560 TTC6Q86TZ1 520 aa17.9■□□□□ 0.46
ATPAF2-204ENST00000467560 COA7Q96BR5 231 aa17.9■□□□□ 0.46
ATPAF2-204ENST00000467560 HAUS7Q99871 368 aa17.9■□□□□ 0.46
ATPAF2-204ENST00000467560 DCP1AQ9NPI6 582 aaPredicted RBP17.9■□□□□ 0.46
ATPAF2-204ENST00000467560 MCM9Q9NXL9 1143 aa17.9■□□□□ 0.46
ATPAF2-204ENST00000467560 POLR3DP05423 398 aaPredicted RBP17.89■□□□□ 0.45
ATPAF2-204ENST00000467560 ADD2P35612 726 aa17.89■□□□□ 0.45
ATPAF2-204ENST00000467560 ABCB5Q2M3G0 1257 aa17.89■□□□□ 0.45
ATPAF2-204ENST00000467560 SLC44A5Q8NCS7 719 aa17.89■□□□□ 0.45
ATPAF2-204ENST00000467560 U2AF1L4Q8WU68 220 aaKnown RBP17.89■□□□□ 0.45
ATPAF2-204ENST00000467560 CRNKL1Q9BZJ0 848 aaKnown RBP17.89■□□□□ 0.45
ATPAF2-204ENST00000467560 MBD4O95243 580 aa17.88■□□□□ 0.45
ATPAF2-204ENST00000467560 USP17L2Q6R6M4 530 aa17.88■□□□□ 0.45
ATPAF2-204ENST00000467560 C12orf42Q96LP6 360 aa17.88■□□□□ 0.45
ATPAF2-204ENST00000467560 LRRCC1Q9C099 1032 aa17.88■□□□□ 0.45
ATPAF2-204ENST00000467560 PORCNQ9H237 461 aa17.88■□□□□ 0.45
ATPAF2-204ENST00000467560 CHMP4BQ9H444 224 aaKnown RBP17.88■□□□□ 0.45
ATPAF2-204ENST00000467560 PLXNB2O15031 1838 aa17.88■□□□□ 0.45
ATPAF2-204ENST00000467560 NAV1Q8NEY1 1877 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms