RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 SLURP2P0DP57 97 aa17.99■□□□□ 0.47
NPHP4-205ENST00000466897 CAP2P40123 477 aa17.99■□□□□ 0.47
NPHP4-205ENST00000466897 ANAPC15P60006 121 aa17.99■□□□□ 0.47
NPHP4-205ENST00000466897 MAP3K9P80192 1104 aa17.99■□□□□ 0.47
NPHP4-205ENST00000466897 KRT23Q9C075 422 aa17.99■□□□□ 0.47
NPHP4-205ENST00000466897 TACC3Q9Y6A5 838 aa17.99■□□□□ 0.47
NPHP4-205ENST00000466897 TMEM88BA6NKF7 163 aa17.98■□□□□ 0.47
NPHP4-205ENST00000466897 E7EWF7 191 aa17.98■□□□□ 0.47
NPHP4-205ENST00000466897 ASNSP08243 561 aa17.98■□□□□ 0.47
NPHP4-205ENST00000466897 TTLL12Q14166 644 aaPredicted RBP17.98■□□□□ 0.47
NPHP4-205ENST00000466897 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.98■□□□□ 0.47
NPHP4-205ENST00000466897 SCYL3Q8IZE3 742 aa17.98■□□□□ 0.47
NPHP4-205ENST00000466897 HHIPL1Q96JK4 782 aa17.98■□□□□ 0.47
NPHP4-205ENST00000466897 UPF2Q9HAU5 1272 aaKnown RBP17.98■□□□□ 0.47
NPHP4-205ENST00000466897 NEDD4P46934 1319 aa17.98■□□□□ 0.47
NPHP4-205ENST00000466897 INPP5BP32019 993 aa17.97■□□□□ 0.47
NPHP4-205ENST00000466897 APLP1P51693 650 aa17.97■□□□□ 0.47
NPHP4-205ENST00000466897 TRDNQ13061 729 aa17.97■□□□□ 0.47
NPHP4-205ENST00000466897 RRP1BQ14684 758 aaKnown RBP17.97■□□□□ 0.47
NPHP4-205ENST00000466897 TMEM179Q6ZVK1 233 aa17.97■□□□□ 0.47
NPHP4-205ENST00000466897 ZNF444Q8N0Y2 327 aaPredicted RBP17.97■□□□□ 0.47
NPHP4-205ENST00000466897 ESR2Q92731 530 aa17.97■□□□□ 0.47
NPHP4-205ENST00000466897 TBC1D2Q9BYX2 928 aa17.97■□□□□ 0.47
NPHP4-205ENST00000466897 CSADQ9Y600 493 aa17.97■□□□□ 0.47
NPHP4-205ENST00000466897 TAF6LQ9Y6J9 622 aa17.97■□□□□ 0.47
NPHP4-205ENST00000466897 TLL2Q9Y6L7 1015 aa17.97■□□□□ 0.47
NPHP4-205ENST00000466897 PRDM1O75626 825 aa17.96■□□□□ 0.47
NPHP4-205ENST00000466897 RBM25P49756 843 aaKnown RBP17.96■□□□□ 0.47
NPHP4-205ENST00000466897 PRKG1Q13976 671 aa17.96■□□□□ 0.47
NPHP4-205ENST00000466897 VGLL4Q14135 290 aa17.96■□□□□ 0.47
NPHP4-205ENST00000466897 ABCB5Q2M3G0 1257 aa17.96■□□□□ 0.47
NPHP4-205ENST00000466897 STOX1Q6ZVD7 989 aa17.96■□□□□ 0.47
NPHP4-205ENST00000466897 SAPCD2Q86UD0 394 aa17.96■□□□□ 0.47
NPHP4-205ENST00000466897 RASEFQ8IZ41 740 aa17.96■□□□□ 0.47
NPHP4-205ENST00000466897 NEDD1Q8NHV4 660 aa17.96■□□□□ 0.47
NPHP4-205ENST00000466897 NCOA7Q8NI08 942 aa17.96■□□□□ 0.47
NPHP4-205ENST00000466897 CABP5Q9NP86 173 aa17.96■□□□□ 0.47
NPHP4-205ENST00000466897 CREBZFQ9NS37 354 aa17.96■□□□□ 0.47
NPHP4-205ENST00000466897 ZBTB21Q9ULJ3 1066 aa17.96■□□□□ 0.47
NPHP4-205ENST00000466897 FZD1Q9UP38 647 aa17.96■□□□□ 0.47
NPHP4-205ENST00000466897 SNX14Q9Y5W7 946 aa17.96■□□□□ 0.47
NPHP4-205ENST00000466897 SNCAIPQ9Y6H5 919 aa17.96■□□□□ 0.47
NPHP4-205ENST00000466897 HMGB1P09429 215 aaKnown RBP17.95■□□□□ 0.46
NPHP4-205ENST00000466897 AKR1B1P15121 316 aa17.95■□□□□ 0.46
NPHP4-205ENST00000466897 PPP4R3BQ5MIZ7 849 aa17.95■□□□□ 0.46
NPHP4-205ENST00000466897 MOB2Q70IA6 237 aa17.95■□□□□ 0.46
NPHP4-205ENST00000466897 RALYLQ86SE5 291 aaKnown RBP17.95■□□□□ 0.46
NPHP4-205ENST00000466897 STK11IPQ8N1F8 1099 aa17.95■□□□□ 0.46
NPHP4-205ENST00000466897 MTA3Q9BTC8 594 aa17.95■□□□□ 0.46
NPHP4-205ENST00000466897 TCP11L1Q9NUJ3 509 aa17.95■□□□□ 0.46
NPHP4-205ENST00000466897 WDR19Q8NEZ3 1342 aa17.95■□□□□ 0.46
NPHP4-205ENST00000466897 IGKV6D-41A0A0C4DH26 115 aa17.94■□□□□ 0.46
NPHP4-205ENST00000466897 TSPY2A6NKD2 308 aa17.94■□□□□ 0.46
NPHP4-205ENST00000466897 UBE2Q2LH0YL09 131 aa17.94■□□□□ 0.46
NPHP4-205ENST00000466897 GH2P01242 217 aa17.94■□□□□ 0.46
NPHP4-205ENST00000466897 TSPY3P0CV98 308 aa17.94■□□□□ 0.46
NPHP4-205ENST00000466897 TSPY8P0CW00 308 aa17.94■□□□□ 0.46
NPHP4-205ENST00000466897 NOVP48745 357 aa17.94■□□□□ 0.46
NPHP4-205ENST00000466897 TFAP4Q01664 338 aa17.94■□□□□ 0.46
NPHP4-205ENST00000466897 MB21D2Q8IYB1 491 aaPredicted RBP17.94■□□□□ 0.46
NPHP4-205ENST00000466897 ZKSCAN4Q969J2 545 aaPredicted RBP17.94■□□□□ 0.46
NPHP4-205ENST00000466897 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.94■□□□□ 0.46
NPHP4-205ENST00000466897 TM6SF1Q9BZW5 370 aa17.94■□□□□ 0.46
NPHP4-205ENST00000466897 INCENPQ9NQS7 918 aa17.94■□□□□ 0.46
NPHP4-205ENST00000466897 PICK1Q9NRD5 415 aa17.94■□□□□ 0.46
NPHP4-205ENST00000466897 LOC285556D6RIA3 1793 aa17.94■□□□□ 0.46
NPHP4-205ENST00000466897 SPDYE5A6NIY4 337 aa17.93■□□□□ 0.46
NPHP4-205ENST00000466897 B4E1Z4 1266 aa17.93■□□□□ 0.46
NPHP4-205ENST00000466897 RANBP6O60518 1105 aaKnown RBP17.93■□□□□ 0.46
NPHP4-205ENST00000466897 GDF11O95390 407 aa17.93■□□□□ 0.46
NPHP4-205ENST00000466897 PTPRAP18433 802 aa17.93■□□□□ 0.46
NPHP4-205ENST00000466897 GUCY1A2P33402 732 aa17.93■□□□□ 0.46
NPHP4-205ENST00000466897 HUNKP57058 714 aa17.93■□□□□ 0.46
NPHP4-205ENST00000466897 JAG1P78504 1218 aa17.93■□□□□ 0.46
NPHP4-205ENST00000466897 RRP12Q5JTH9 1297 aaKnown RBP17.93■□□□□ 0.46
NPHP4-205ENST00000466897 ERO1BQ86YB8 467 aa17.93■□□□□ 0.46
NPHP4-205ENST00000466897 NEK1Q96PY6 1258 aa17.93■□□□□ 0.46
NPHP4-205ENST00000466897 C22orf23Q9BZE7 217 aa17.93■□□□□ 0.46
NPHP4-205ENST00000466897 KANSL2Q9H9L4 492 aa17.93■□□□□ 0.46
NPHP4-205ENST00000466897 TOMM22Q9NS69 142 aa17.93■□□□□ 0.46
NPHP4-205ENST00000466897 ZSWIM5Q9P217 1185 aa17.93■□□□□ 0.46
NPHP4-205ENST00000466897 SYNPO2Q9UMS6 1093 aa17.93■□□□□ 0.46
NPHP4-205ENST00000466897 USP17L5A8MUK1 530 aa17.92■□□□□ 0.46
NPHP4-205ENST00000466897 KDM4AO75164 1064 aa17.92■□□□□ 0.46
NPHP4-205ENST00000466897 PSMA5P28066 241 aa17.92■□□□□ 0.46
NPHP4-205ENST00000466897 PPATQ06203 517 aa17.92■□□□□ 0.46
NPHP4-205ENST00000466897 ADCK5Q3MIX3 580 aa17.92■□□□□ 0.46
NPHP4-205ENST00000466897 CCDC178Q5BJE1 867 aa17.92■□□□□ 0.46
NPHP4-205ENST00000466897 IQCA1Q86XH1 822 aa17.92■□□□□ 0.46
NPHP4-205ENST00000466897 CLMNQ96JQ2 1002 aa17.92■□□□□ 0.46
NPHP4-205ENST00000466897 TBC1D32Q96NH3 1257 aa17.92■□□□□ 0.46
NPHP4-205ENST00000466897 WDR18Q9BV38 432 aa17.92■□□□□ 0.46
NPHP4-205ENST00000466897 MPHOSPH10O00566 681 aaKnown RBP17.91■□□□□ 0.46
NPHP4-205ENST00000466897 MCM5P33992 734 aa17.91■□□□□ 0.46
NPHP4-205ENST00000466897 FAM47AQ5JRC9 791 aa17.91■□□□□ 0.46
NPHP4-205ENST00000466897 DNAJC5GQ8N7S2 189 aa17.91■□□□□ 0.46
NPHP4-205ENST00000466897 IL27Q8NEV9 243 aa17.91■□□□□ 0.46
NPHP4-205ENST00000466897 SLC10A4Q96EP9 437 aa17.91■□□□□ 0.46
NPHP4-205ENST00000466897 AS3MTQ9HBK9 375 aa17.91■□□□□ 0.46
NPHP4-205ENST00000466897 THSD7BQ9C0I4 1608 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms