RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.76□□□□□ -1.49
GTF3C3-209ENST00000466862 BIN1O00499 593 aa5.76□□□□□ -1.49
GTF3C3-209ENST00000466862 CST3P01034 146 aaPredicted RBP5.76□□□□□ -1.49
GTF3C3-209ENST00000466862 GRK4P32298 578 aa5.76□□□□□ -1.49
GTF3C3-209ENST00000466862 DAB2P98082 770 aa5.76□□□□□ -1.49
GTF3C3-209ENST00000466862 CDC37L1Q7L3B6 337 aa5.76□□□□□ -1.49
GTF3C3-209ENST00000466862 MFSD4AQ8N468 514 aa5.76□□□□□ -1.49
GTF3C3-209ENST00000466862 FAM168AQ92567 244 aa5.76□□□□□ -1.49
GTF3C3-209ENST00000466862 C19orf73Q9NVV2 129 aa5.76□□□□□ -1.49
GTF3C3-209ENST00000466862 ST14Q9Y5Y6 855 aa5.76□□□□□ -1.49
GTF3C3-209ENST00000466862 GNAT3A8MTJ3 354 aa5.75□□□□□ -1.49
GTF3C3-209ENST00000466862 ST13P50502 369 aaKnown RBP5.75□□□□□ -1.49
GTF3C3-209ENST00000466862 ETF1P62495 437 aaKnown RBP5.75□□□□□ -1.49
GTF3C3-209ENST00000466862 IKZF1Q13422 519 aa5.75□□□□□ -1.49
GTF3C3-209ENST00000466862 EAPPQ56P03 285 aaPredicted RBP5.75□□□□□ -1.49
GTF3C3-209ENST00000466862 LETMD1Q6P1Q0 360 aa5.75□□□□□ -1.49
GTF3C3-209ENST00000466862 HID1Q8IV36 788 aa5.75□□□□□ -1.49
GTF3C3-209ENST00000466862 MRPL41Q8IXM3 137 aaKnown RBP5.75□□□□□ -1.49
GTF3C3-209ENST00000466862 MFSD2AQ8NA29 543 aa5.75□□□□□ -1.49
GTF3C3-209ENST00000466862 RIN3Q8TB24 985 aa5.75□□□□□ -1.49
GTF3C3-209ENST00000466862 KRTAP4-2Q9BYR5 136 aa5.75□□□□□ -1.49
GTF3C3-209ENST00000466862 TJP2Q9UDY2 1190 aa5.75□□□□□ -1.49
GTF3C3-209ENST00000466862 PARP2Q9UGN5 583 aa5.75□□□□□ -1.49
GTF3C3-209ENST00000466862 CTNND2Q9UQB3 1225 aa5.75□□□□□ -1.49
GTF3C3-209ENST00000466862 FGD1P98174 961 aa5.74□□□□□ -1.49
GTF3C3-209ENST00000466862 ZP2Q05996 745 aa5.74□□□□□ -1.49
GTF3C3-209ENST00000466862 SFRP5Q5T4F7 317 aa5.74□□□□□ -1.49
GTF3C3-209ENST00000466862 HSPA12BQ96MM6 686 aa5.74□□□□□ -1.49
GTF3C3-209ENST00000466862 NOC4LQ9BVI4 516 aaKnown RBP5.74□□□□□ -1.49
GTF3C3-209ENST00000466862 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.74□□□□□ -1.49
GTF3C3-209ENST00000466862 MAP3K11Q16584 847 aa5.73□□□□□ -1.49
GTF3C3-209ENST00000466862 ZNF648Q5T619 568 aaPredicted RBP5.73□□□□□ -1.49
GTF3C3-209ENST00000466862 TMC4Q7Z404 712 aa5.73□□□□□ -1.49
GTF3C3-209ENST00000466862 PHC3Q8NDX5 983 aa5.73□□□□□ -1.49
GTF3C3-209ENST00000466862 DNAJB8Q8NHS0 232 aa5.73□□□□□ -1.49
GTF3C3-209ENST00000466862 TMEM40Q8WWA1 233 aa5.73□□□□□ -1.49
GTF3C3-209ENST00000466862 RHOVQ96L33 236 aa5.73□□□□□ -1.49
GTF3C3-209ENST00000466862 DPH2Q9BQC3 489 aaPredicted RBP5.73□□□□□ -1.49
GTF3C3-209ENST00000466862 ATP13A1Q9HD20 1204 aa5.73□□□□□ -1.49
GTF3C3-209ENST00000466862 LMCD1Q9NZU5 365 aa5.73□□□□□ -1.49
GTF3C3-209ENST00000466862 TLR6Q9Y2C9 796 aa5.73□□□□□ -1.49
GTF3C3-209ENST00000466862 USP31Q70CQ4 1352 aa5.72□□□□□ -1.49
GTF3C3-209ENST00000466862 ZNF503-AS2A6NEH8 195 aa5.72□□□□□ -1.49
GTF3C3-209ENST00000466862 RPL6Q02878 288 aaKnown RBP5.72□□□□□ -1.49
GTF3C3-209ENST00000466862 MESP2Q0VG99 397 aa5.72□□□□□ -1.49
GTF3C3-209ENST00000466862 THAP5Q7Z6K1 395 aa5.72□□□□□ -1.49
GTF3C3-209ENST00000466862 ZSWIM9Q86XI8 627 aa5.72□□□□□ -1.49
GTF3C3-209ENST00000466862 ACSF2Q96CM8 615 aaPredicted RBP5.72□□□□□ -1.49
GTF3C3-209ENST00000466862 CRELD1Q96HD1 420 aa5.72□□□□□ -1.49
GTF3C3-209ENST00000466862 TMEM87BQ96K49 555 aa5.72□□□□□ -1.49
GTF3C3-209ENST00000466862 MIR1-1HGQ9H1L0 117 aa5.72□□□□□ -1.49
GTF3C3-209ENST00000466862 CARS2Q9HA77 564 aaKnown RBP5.72□□□□□ -1.49
GTF3C3-209ENST00000466862 TPX2Q9ULW0 747 aaKnown RBP5.72□□□□□ -1.49
GTF3C3-209ENST00000466862 H3BS24 57 aa5.71□□□□□ -1.5
GTF3C3-209ENST00000466862 PGRP06401 933 aa5.71□□□□□ -1.5
GTF3C3-209ENST00000466862 TNK2Q07912 1038 aa5.71□□□□□ -1.5
GTF3C3-209ENST00000466862 ZNF746Q6NUN9 644 aaPredicted RBP5.71□□□□□ -1.5
GTF3C3-209ENST00000466862 XAGE3Q8WTP9 111 aa5.71□□□□□ -1.5
GTF3C3-209ENST00000466862 PPP1R13LQ8WUF5 828 aa5.71□□□□□ -1.5
GTF3C3-209ENST00000466862 COX4I2Q96KJ9 171 aa5.71□□□□□ -1.5
GTF3C3-209ENST00000466862 Q96M66 194 aa5.71□□□□□ -1.5
GTF3C3-209ENST00000466862 FAM161BQ96MY7 647 aa5.71□□□□□ -1.5
GTF3C3-209ENST00000466862 ADAM30Q9UKF2 790 aa5.71□□□□□ -1.5
GTF3C3-209ENST00000466862 FAM221AA4D161 298 aa5.7□□□□□ -1.5
GTF3C3-209ENST00000466862 KIR3DL1P43629 444 aa5.7□□□□□ -1.5
GTF3C3-209ENST00000466862 TAF1CQ15572 869 aaPredicted RBP5.7□□□□□ -1.5
GTF3C3-209ENST00000466862 ZNF124Q15973 351 aa5.7□□□□□ -1.5
GTF3C3-209ENST00000466862 TSNAXIP1Q2TAA8 658 aa5.7□□□□□ -1.5
GTF3C3-209ENST00000466862 FYB2Q5VWT5 728 aa5.7□□□□□ -1.5
GTF3C3-209ENST00000466862 CCDC84Q86UT8 332 aaPredicted RBP5.7□□□□□ -1.5
GTF3C3-209ENST00000466862 MCATQ8IVS2 390 aaKnown RBP5.7□□□□□ -1.5
GTF3C3-209ENST00000466862 FAM155AB1AL88 458 aaPredicted RBP5.69□□□□□ -1.5
GTF3C3-209ENST00000466862 CILPO75339 1184 aa5.69□□□□□ -1.5
GTF3C3-209ENST00000466862 RLBP1P12271 317 aa5.69□□□□□ -1.5
GTF3C3-209ENST00000466862 TAGLNQ01995 201 aaKnown RBP5.69□□□□□ -1.5
GTF3C3-209ENST00000466862 PSMD2Q13200 908 aa5.69□□□□□ -1.5
GTF3C3-209ENST00000466862 CDKAL1Q5VV42 579 aa5.69□□□□□ -1.5
GTF3C3-209ENST00000466862 SLC6A19Q695T7 634 aa5.69□□□□□ -1.5
GTF3C3-209ENST00000466862 BNC2Q6ZN30 1099 aaPredicted RBP5.69□□□□□ -1.5
GTF3C3-209ENST00000466862 CILP2Q8IUL8 1156 aa5.69□□□□□ -1.5
GTF3C3-209ENST00000466862 CORINQ9Y5Q5 1042 aa5.69□□□□□ -1.5
GTF3C3-209ENST00000466862 PRR36Q9H6K5 1346 aa5.69□□□□□ -1.5
GTF3C3-209ENST00000466862 ESR1P03372 595 aa5.68□□□□□ -1.5
GTF3C3-209ENST00000466862 LMNB2Q03252 620 aa5.68□□□□□ -1.5
GTF3C3-209ENST00000466862 GAB4Q2WGN9 574 aa5.68□□□□□ -1.5
GTF3C3-209ENST00000466862 TMEM201Q5SNT2 666 aa5.68□□□□□ -1.5
GTF3C3-209ENST00000466862 CDH24Q86UP0 819 aa5.68□□□□□ -1.5
GTF3C3-209ENST00000466862 PIWIL2Q8TC59 973 aaKnown RBP5.68□□□□□ -1.5
GTF3C3-209ENST00000466862 CYB5D2Q8WUJ1 264 aa5.68□□□□□ -1.5
GTF3C3-209ENST00000466862 F6X3S4 739 aa5.67□□□□□ -1.5
GTF3C3-209ENST00000466862 FARP2O94887 1054 aaPredicted RBP5.67□□□□□ -1.5
GTF3C3-209ENST00000466862 CBX7O95931 251 aa5.67□□□□□ -1.5
GTF3C3-209ENST00000466862 SRFP11831 508 aa5.67□□□□□ -1.5
GTF3C3-209ENST00000466862 LMNB1P20700 586 aa5.67□□□□□ -1.5
GTF3C3-209ENST00000466862 GARTP22102 1010 aa5.67□□□□□ -1.5
GTF3C3-209ENST00000466862 GDNFP39905 211 aa5.67□□□□□ -1.5
GTF3C3-209ENST00000466862 PDE4BQ07343 736 aa5.67□□□□□ -1.5
GTF3C3-209ENST00000466862 KCNMB1Q16558 191 aa5.67□□□□□ -1.5
GTF3C3-209ENST00000466862 AEBP1Q8IUX7 1158 aa5.67□□□□□ -1.5
GTF3C3-209ENST00000466862 GATAD2BQ8WXI9 593 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms