RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 MAP2K5Q13163 448 aa18.39■□□□□ 0.53
HMGXB4-206ENST00000466438 SNX17Q15036 470 aa18.39■□□□□ 0.53
HMGXB4-206ENST00000466438 SRCIN1Q9C0H9 1055 aa18.39■□□□□ 0.53
HMGXB4-206ENST00000466438 ZNF576Q9H609 170 aa18.39■□□□□ 0.53
HMGXB4-206ENST00000466438 CCER2I3L3R5 266 aa18.38■□□□□ 0.53
HMGXB4-206ENST00000466438 NBPF7P0C2Y1 421 aaPredicted RBP18.38■□□□□ 0.53
HMGXB4-206ENST00000466438 CNGA1P29973 690 aa18.38■□□□□ 0.53
HMGXB4-206ENST00000466438 CAP2P40123 477 aa18.38■□□□□ 0.53
HMGXB4-206ENST00000466438 Q3C1V9 767 aa18.38■□□□□ 0.53
HMGXB4-206ENST00000466438 TRIM60Q495X7 471 aa18.38■□□□□ 0.53
HMGXB4-206ENST00000466438 AKNAD1Q5T1N1 836 aa18.38■□□□□ 0.53
HMGXB4-206ENST00000466438 IL27Q8NEV9 243 aa18.38■□□□□ 0.53
HMGXB4-206ENST00000466438 GTF3C2Q8WUA4 911 aaPredicted RBP18.38■□□□□ 0.53
HMGXB4-206ENST00000466438 TMOD4Q9NZQ9 345 aa18.38■□□□□ 0.53
HMGXB4-206ENST00000466438 HCN4Q9Y3Q4 1203 aa18.38■□□□□ 0.53
HMGXB4-206ENST00000466438 TRIM43BA6NCK2 446 aa18.37■□□□□ 0.53
HMGXB4-206ENST00000466438 VAMP4O75379 141 aa18.37■□□□□ 0.53
HMGXB4-206ENST00000466438 MTMR2Q13614 643 aa18.37■□□□□ 0.53
HMGXB4-206ENST00000466438 GJC2Q5T442 439 aaPredicted RBP18.37■□□□□ 0.53
HMGXB4-206ENST00000466438 SH3RF1Q7Z6J0 888 aa18.37■□□□□ 0.53
HMGXB4-206ENST00000466438 ANKRD44Q8N8A2 993 aa18.37■□□□□ 0.53
HMGXB4-206ENST00000466438 ARRDC4Q8NCT1 418 aa18.37■□□□□ 0.53
HMGXB4-206ENST00000466438 KLHDC4Q8TBB5 520 aa18.37■□□□□ 0.53
HMGXB4-206ENST00000466438 PPM1EQ8WY54 764 aa18.37■□□□□ 0.53
HMGXB4-206ENST00000466438 TRIM43Q96BQ3 446 aaPredicted RBP18.37■□□□□ 0.53
HMGXB4-206ENST00000466438 EDC3Q96F86 508 aaKnown RBP18.37■□□□□ 0.53
HMGXB4-206ENST00000466438 GAS2L1Q99501 681 aaPredicted RBP18.37■□□□□ 0.53
HMGXB4-206ENST00000466438 WDR18Q9BV38 432 aa18.37■□□□□ 0.53
HMGXB4-206ENST00000466438 PRKRIP1Q9H875 184 aaPredicted RBP18.37■□□□□ 0.53
HMGXB4-206ENST00000466438 GNL3LQ9NVN8 582 aaKnown RBP18.37■□□□□ 0.53
HMGXB4-206ENST00000466438 FLRT1Q9NZU1 646 aa18.37■□□□□ 0.53
HMGXB4-206ENST00000466438 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.36■□□□□ 0.53
HMGXB4-206ENST00000466438 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.36■□□□□ 0.53
HMGXB4-206ENST00000466438 KBTBD13C9JR72 458 aa18.36■□□□□ 0.53
HMGXB4-206ENST00000466438 BACE1P56817 501 aa18.36■□□□□ 0.53
HMGXB4-206ENST00000466438 SLF2Q8IX21 1173 aa18.36■□□□□ 0.53
HMGXB4-206ENST00000466438 ZGPATQ8N5A5 531 aaKnown RBP18.36■□□□□ 0.53
HMGXB4-206ENST00000466438 FAM163AQ96GL9 167 aaPredicted RBP18.36■□□□□ 0.53
HMGXB4-206ENST00000466438 CWC22Q9HCG8 908 aaKnown RBP18.36■□□□□ 0.53
HMGXB4-206ENST00000466438 DENND2AQ9ULE3 1009 aa18.36■□□□□ 0.53
HMGXB4-206ENST00000466438 IL16Q14005 1332 aa18.35■□□□□ 0.53
HMGXB4-206ENST00000466438 SEMA3EO15041 775 aa18.35■□□□□ 0.53
HMGXB4-206ENST00000466438 GLRX3O76003 335 aaKnown RBP18.35■□□□□ 0.53
HMGXB4-206ENST00000466438 BTDP43251 543 aa18.35■□□□□ 0.53
HMGXB4-206ENST00000466438 EPHB4P54760 987 aa18.35■□□□□ 0.53
HMGXB4-206ENST00000466438 RRP1BQ14684 758 aaKnown RBP18.35■□□□□ 0.53
HMGXB4-206ENST00000466438 CCDC27Q2M243 656 aa18.35■□□□□ 0.53
HMGXB4-206ENST00000466438 C1orf53Q5VUE5 145 aa18.35■□□□□ 0.53
HMGXB4-206ENST00000466438 POTEEQ6S8J3 1075 aa18.35■□□□□ 0.53
HMGXB4-206ENST00000466438 SLC4A10Q6U841 1118 aa18.35■□□□□ 0.53
HMGXB4-206ENST00000466438 DZIP1Q86YF9 867 aaKnown RBP18.35■□□□□ 0.53
HMGXB4-206ENST00000466438 TIFAQ96CG3 184 aa18.35■□□□□ 0.53
HMGXB4-206ENST00000466438 PAGR1Q9BTK6 254 aa18.35■□□□□ 0.53
HMGXB4-206ENST00000466438 FANCIQ9NVI1 1328 aa18.34■□□□□ 0.53
HMGXB4-206ENST00000466438 WWC1Q8IX03 1113 aa18.34■□□□□ 0.53
HMGXB4-206ENST00000466438 PIEZO1Q92508 2521 aa18.33■□□□□ 0.53
HMGXB4-206ENST00000466438 C19orf81C9J6K1 198 aa18.33■□□□□ 0.52
HMGXB4-206ENST00000466438 HOXC6P09630 235 aa18.33■□□□□ 0.52
HMGXB4-206ENST00000466438 ATP2B2Q01814 1243 aa18.33■□□□□ 0.52
HMGXB4-206ENST00000466438 TRPV1Q8NER1 839 aa18.33■□□□□ 0.52
HMGXB4-206ENST00000466438 TACC3Q9Y6A5 838 aa18.33■□□□□ 0.52
HMGXB4-206ENST00000466438 MROH7-TTC4A0A0A0MT08 1334 aa18.32■□□□□ 0.52
HMGXB4-206ENST00000466438 SLC15A5A6NIM6 579 aa18.32■□□□□ 0.52
HMGXB4-206ENST00000466438 EYA2O00167 538 aa18.32■□□□□ 0.52
HMGXB4-206ENST00000466438 CYBAP13498 195 aa18.32■□□□□ 0.52
HMGXB4-206ENST00000466438 ITGB8P26012 769 aa18.32■□□□□ 0.52
HMGXB4-206ENST00000466438 CYP2C19P33261 490 aa18.32■□□□□ 0.52
HMGXB4-206ENST00000466438 RHBDL3P58872 404 aa18.32■□□□□ 0.52
HMGXB4-206ENST00000466438 ASNSP08243 561 aa18.31■□□□□ 0.52
HMGXB4-206ENST00000466438 PTPREP23469 700 aa18.31■□□□□ 0.52
HMGXB4-206ENST00000466438 CCNA1P78396 465 aa18.31■□□□□ 0.52
HMGXB4-206ENST00000466438 TLE2Q04725 743 aa18.31■□□□□ 0.52
HMGXB4-206ENST00000466438 HERC5Q9UII4 1024 aaKnown RBP18.31■□□□□ 0.52
HMGXB4-206ENST00000466438 GPR75-ASB3A0A0A6YYF3 556 aa18.3■□□□□ 0.52
HMGXB4-206ENST00000466438 USP17L10C9JJH3 530 aa18.3■□□□□ 0.52
HMGXB4-206ENST00000466438 IGHA2P01877 340 aa18.3■□□□□ 0.52
HMGXB4-206ENST00000466438 CLTBP09497 229 aa18.3■□□□□ 0.52
HMGXB4-206ENST00000466438 ADCYAP1R1P41586 468 aa18.3■□□□□ 0.52
HMGXB4-206ENST00000466438 PHKA1P46020 1223 aa18.3■□□□□ 0.52
HMGXB4-206ENST00000466438 FPGSQ05932 587 aa18.3■□□□□ 0.52
HMGXB4-206ENST00000466438 ATP2B3Q16720 1220 aa18.3■□□□□ 0.52
HMGXB4-206ENST00000466438 NECAB3Q96P71 396 aaPredicted RBP18.3■□□□□ 0.52
HMGXB4-206ENST00000466438 LRFN3Q9BTN0 628 aa18.3■□□□□ 0.52
HMGXB4-206ENST00000466438 PRDM12Q9H4Q4 367 aa18.3■□□□□ 0.52
HMGXB4-206ENST00000466438 RABGAP1Q9Y3P9 1069 aa18.3■□□□□ 0.52
HMGXB4-206ENST00000466438 NDUFB9Q9Y6M9 179 aa18.3■□□□□ 0.52
HMGXB4-206ENST00000466438 KIAA0355O15063 1070 aa18.29■□□□□ 0.52
HMGXB4-206ENST00000466438 RAG1P15918 1043 aa18.29■□□□□ 0.52
HMGXB4-206ENST00000466438 GRB14Q14449 540 aa18.29■□□□□ 0.52
HMGXB4-206ENST00000466438 WDR78Q5VTH9 848 aa18.29■□□□□ 0.52
HMGXB4-206ENST00000466438 NPLOC4Q8TAT6 608 aa18.29■□□□□ 0.52
HMGXB4-206ENST00000466438 ABCF2Q9UG63 623 aa18.29■□□□□ 0.52
HMGXB4-206ENST00000466438 IVNS1ABPQ9Y6Y0 642 aa18.29■□□□□ 0.52
HMGXB4-206ENST00000466438 MAP4K4O95819 1239 aaPredicted RBP18.28■□□□□ 0.52
HMGXB4-206ENST00000466438 MYCNP04198 464 aaPredicted RBP18.28■□□□□ 0.52
HMGXB4-206ENST00000466438 CCDC85BQ15834 202 aaPredicted RBP18.28■□□□□ 0.52
HMGXB4-206ENST00000466438 SPTY2D1Q68D10 685 aaPredicted RBP18.28■□□□□ 0.52
HMGXB4-206ENST00000466438 FERMT2Q96AC1 680 aa18.28■□□□□ 0.52
HMGXB4-206ENST00000466438 CHD9Q3L8U1 2897 aa18.28■□□□□ 0.52
HMGXB4-206ENST00000466438 PDS5AQ29RF7 1337 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms