RNA–Protein interactions for RNA: ENST00000465187.1

EDEM1-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 4

Gene EDEM1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-205ENST00000465187 TAOK2Q9UL54 1235 aa26.34■■□□□ 1.81
EDEM1-205ENST00000465187 USP5P45974 858 aa26.33■■□□□ 1.81
EDEM1-205ENST00000465187 RIOK1Q9BRS2 568 aaKnown RBP26.33■■□□□ 1.81
EDEM1-205ENST00000465187 PNMA3Q9UL41 463 aa26.33■■□□□ 1.81
EDEM1-205ENST00000465187 ASNSP08243 561 aa26.32■■□□□ 1.8
EDEM1-205ENST00000465187 BACE1P56817 501 aa26.32■■□□□ 1.8
EDEM1-205ENST00000465187 POTEEQ6S8J3 1075 aa26.32■■□□□ 1.8
EDEM1-205ENST00000465187 SLAIN1Q8ND83 568 aa26.32■■□□□ 1.8
EDEM1-205ENST00000465187 TRIM34Q9BYJ4 488 aa26.32■■□□□ 1.8
EDEM1-205ENST00000465187 AS3MTQ9HBK9 375 aa26.32■■□□□ 1.8
EDEM1-205ENST00000465187 GH2P01242 217 aa26.31■■□□□ 1.8
EDEM1-205ENST00000465187 CHGBP05060 677 aa26.31■■□□□ 1.8
EDEM1-205ENST00000465187 INHAP05111 366 aa26.31■■□□□ 1.8
EDEM1-205ENST00000465187 HLA-DOAP06340 250 aa26.31■■□□□ 1.8
EDEM1-205ENST00000465187 MAP3K12Q12852 859 aa26.31■■□□□ 1.8
EDEM1-205ENST00000465187 DNAJC2Q99543 621 aaKnown RBP26.31■■□□□ 1.8
EDEM1-205ENST00000465187 P2RX7Q99572 595 aaKnown RBP26.31■■□□□ 1.8
EDEM1-205ENST00000465187 TBC1D2Q9BYX2 928 aa26.31■■□□□ 1.8
EDEM1-205ENST00000465187 TXNRD2Q9NNW7 524 aa26.31■■□□□ 1.8
EDEM1-205ENST00000465187 GOLIM4O00461 696 aa26.3■■□□□ 1.8
EDEM1-205ENST00000465187 GJB1P08034 283 aa26.3■■□□□ 1.8
EDEM1-205ENST00000465187 PDE6AP16499 860 aa26.3■■□□□ 1.8
EDEM1-205ENST00000465187 GJA8P48165 433 aa26.3■■□□□ 1.8
EDEM1-205ENST00000465187 PLCD1P51178 756 aa26.3■■□□□ 1.8
EDEM1-205ENST00000465187 RPAP2Q8IXW5 612 aaPredicted RBP26.3■■□□□ 1.8
EDEM1-205ENST00000465187 DDX19BQ9UMR2 479 aa26.3■■□□□ 1.8
EDEM1-205ENST00000465187 ZYXQ15942 572 aaKnown RBP26.29■■□□□ 1.8
EDEM1-205ENST00000465187 HSP90AB4PQ58FF6 505 aa26.29■■□□□ 1.8
EDEM1-205ENST00000465187 UBE2Q1Q7Z7E8 422 aa26.29■■□□□ 1.8
EDEM1-205ENST00000465187 KIF1BPQ96EK5 621 aa26.29■■□□□ 1.8
EDEM1-205ENST00000465187 EMILIN3Q9NT22 766 aa26.29■■□□□ 1.8
EDEM1-205ENST00000465187 BAZ2AQ9UIF9 1905 aaKnown RBP26.29■■□□□ 1.8
EDEM1-205ENST00000465187 TCRBV5S4A2TA0A5A2 114 aa26.28■■□□□ 1.8
EDEM1-205ENST00000465187 USP17L10C9JJH3 530 aa26.28■■□□□ 1.8
EDEM1-205ENST00000465187 UBXN2AP68543 259 aa26.28■■□□□ 1.8
EDEM1-205ENST00000465187 TRIM32Q13049 653 aa26.28■■□□□ 1.8
EDEM1-205ENST00000465187 IRF5Q13568 498 aa26.28■■□□□ 1.8
EDEM1-205ENST00000465187 HABP4Q5JVS0 413 aaKnown RBP26.28■■□□□ 1.8
EDEM1-205ENST00000465187 SLC9C2Q5TAH2 1124 aa26.28■■□□□ 1.8
EDEM1-205ENST00000465187 TATDN1Q6P1N9 297 aa26.28■■□□□ 1.8
EDEM1-205ENST00000465187 CLASRPQ8N2M8 674 aaKnown RBP26.28■■□□□ 1.8
EDEM1-205ENST00000465187 U2AF1L4Q8WU68 220 aaKnown RBP26.28■■□□□ 1.8
EDEM1-205ENST00000465187 MYH7P12883 1935 aa26.27■■□□□ 1.8
EDEM1-205ENST00000465187 H0YGN5 161 aa26.27■■□□□ 1.8
EDEM1-205ENST00000465187 IGSF3O75054 1194 aa26.27■■□□□ 1.8
EDEM1-205ENST00000465187 MS4A1P11836 297 aa26.27■■□□□ 1.8
EDEM1-205ENST00000465187 GCLCP48506 637 aaPredicted RBP26.27■■□□□ 1.8
EDEM1-205ENST00000465187 COA7Q96BR5 231 aa26.27■■□□□ 1.8
EDEM1-205ENST00000465187 TMOD4Q9NZQ9 345 aa26.27■■□□□ 1.8
EDEM1-205ENST00000465187 GJD2Q9UKL4 321 aa26.27■■□□□ 1.8
EDEM1-205ENST00000465187 ZNF532Q9HCE3 1301 aa26.27■■□□□ 1.8
EDEM1-205ENST00000465187 ALPK3Q96L96 1907 aa26.26■■□□□ 1.79
EDEM1-205ENST00000465187 MAGEB6P1A0A0J9YX57 407 aa26.26■■□□□ 1.79
EDEM1-205ENST00000465187 IFIT2P09913 472 aaKnown RBP26.26■■□□□ 1.79
EDEM1-205ENST00000465187 CYP2D6P10635 497 aa26.26■■□□□ 1.79
EDEM1-205ENST00000465187 SHMT1P34896 483 aa26.26■■□□□ 1.79
EDEM1-205ENST00000465187 HERVK_113P62684 666 aa26.26■■□□□ 1.79
EDEM1-205ENST00000465187 IRX3P78415 501 aaPredicted RBP26.26■■□□□ 1.79
EDEM1-205ENST00000465187 PABPC4Q13310 644 aaKnown RBP eCLIP26.26■■□□□ 1.79
EDEM1-205ENST00000465187 LCORLQ8N3X6 602 aa26.26■■□□□ 1.79
EDEM1-205ENST00000465187 ACER1Q8TDN7 264 aa26.26■■□□□ 1.79
EDEM1-205ENST00000465187 PXYLP1Q8TE99 480 aa26.26■■□□□ 1.79
EDEM1-205ENST00000465187 MORF4L1Q9UBU8 362 aa26.26■■□□□ 1.79
EDEM1-205ENST00000465187 SERPINB13Q9UIV8 391 aa26.26■■□□□ 1.79
EDEM1-205ENST00000465187 CEP290O15078 2479 aa26.25■■□□□ 1.79
EDEM1-205ENST00000465187 SMIM22K7EJ46 135 aa26.25■■□□□ 1.79
EDEM1-205ENST00000465187 SMARCA5O60264 1052 aaPredicted RBP26.25■■□□□ 1.79
EDEM1-205ENST00000465187 HOXA7P31268 230 aaPredicted RBP26.25■■□□□ 1.79
EDEM1-205ENST00000465187 Q3C1V9 767 aa26.25■■□□□ 1.79
EDEM1-205ENST00000465187 SDR42E1Q8WUS8 393 aa26.25■■□□□ 1.79
EDEM1-205ENST00000465187 BOLA2Q9H3K6 86 aa26.25■■□□□ 1.79
EDEM1-205ENST00000465187 RBPJLQ9UBG7 517 aa26.25■■□□□ 1.79
EDEM1-205ENST00000465187 MYH8P13535 1937 aa26.24■■□□□ 1.79
EDEM1-205ENST00000465187 C19orf81C9J6K1 198 aa26.24■■□□□ 1.79
EDEM1-205ENST00000465187 GUCY1A2P33402 732 aa26.24■■□□□ 1.79
EDEM1-205ENST00000465187 DEFB118Q96PH6 123 aa26.24■■□□□ 1.79
EDEM1-205ENST00000465187 EHD4Q9H223 541 aa26.24■■□□□ 1.79
EDEM1-205ENST00000465187 COLQQ9Y215 455 aaPredicted RBP26.24■■□□□ 1.79
EDEM1-205ENST00000465187 HMMRO75330 724 aa26.23■■□□□ 1.79
EDEM1-205ENST00000465187 SGPL1O95470 568 aa26.23■■□□□ 1.79
EDEM1-205ENST00000465187 RAB3GAP1Q15042 981 aa26.23■■□□□ 1.79
EDEM1-205ENST00000465187 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.23■■□□□ 1.79
EDEM1-205ENST00000465187 PRKAB2O43741 272 aa26.22■■□□□ 1.79
EDEM1-205ENST00000465187 TTF1Q15361 905 aaPredicted RBP26.22■■□□□ 1.79
EDEM1-205ENST00000465187 CERKLQ49MI3 558 aaPredicted RBP26.22■■□□□ 1.79
EDEM1-205ENST00000465187 SLC44A5Q8NCS7 719 aa26.22■■□□□ 1.79
EDEM1-205ENST00000465187 NKX2-3Q8TAU0 364 aa26.22■■□□□ 1.79
EDEM1-205ENST00000465187 PAGR1Q9BTK6 254 aa26.22■■□□□ 1.79
EDEM1-205ENST00000465187 PORCNQ9H237 461 aa26.22■■□□□ 1.79
EDEM1-205ENST00000465187 ARMT1Q9H993 441 aa26.22■■□□□ 1.79
EDEM1-205ENST00000465187 FARP2O94887 1054 aaPredicted RBP26.21■■□□□ 1.79
EDEM1-205ENST00000465187 GABPAQ06546 454 aa26.21■■□□□ 1.79
EDEM1-205ENST00000465187 ABCB5Q2M3G0 1257 aa26.21■■□□□ 1.79
EDEM1-205ENST00000465187 USP17L2Q6R6M4 530 aa26.21■■□□□ 1.79
EDEM1-205ENST00000465187 TTC6Q86TZ1 520 aa26.21■■□□□ 1.79
EDEM1-205ENST00000465187 PAK6Q9NQU5 681 aaPredicted RBP26.21■■□□□ 1.79
EDEM1-205ENST00000465187 GINM1Q9NU53 330 aa26.21■■□□□ 1.79
EDEM1-205ENST00000465187 RAB11FIP3O75154 756 aa26.2■■□□□ 1.78
EDEM1-205ENST00000465187 CNMDO75829 334 aa26.2■■□□□ 1.78
EDEM1-205ENST00000465187 POLR3DP05423 398 aaPredicted RBP26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms