RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 IRX3P78415 501 aaPredicted RBP18.78■□□□□ 0.6
HOXB3-204ENST00000465120 TTF1Q15361 905 aaPredicted RBP18.78■□□□□ 0.6
HOXB3-204ENST00000465120 FAM110CQ1W6H9 321 aa18.78■□□□□ 0.6
HOXB3-204ENST00000465120 SH3D19Q5HYK7 790 aa18.78■□□□□ 0.6
HOXB3-204ENST00000465120 KIF1BPQ96EK5 621 aa18.78■□□□□ 0.6
HOXB3-204ENST00000465120 DNAJC2Q99543 621 aaKnown RBP18.78■□□□□ 0.6
HOXB3-204ENST00000465120 WDR18Q9BV38 432 aa18.78■□□□□ 0.6
HOXB3-204ENST00000465120 DNAJC18Q9H819 358 aa18.78■□□□□ 0.6
HOXB3-204ENST00000465120 RCAN3Q9UKA8 241 aa18.78■□□□□ 0.6
HOXB3-204ENST00000465120 USP17L10C9JJH3 530 aa18.77■□□□□ 0.6
HOXB3-204ENST00000465120 ELNP15502 786 aa18.77■□□□□ 0.6
HOXB3-204ENST00000465120 JAG1P78504 1218 aa18.77■□□□□ 0.6
HOXB3-204ENST00000465120 SHROOM1Q2M3G4 852 aaPredicted RBP18.77■□□□□ 0.6
HOXB3-204ENST00000465120 GINM1Q9NU53 330 aa18.77■□□□□ 0.6
HOXB3-204ENST00000465120 ZBTB21Q9ULJ3 1066 aa18.77■□□□□ 0.6
HOXB3-204ENST00000465120 MAGEB6P1A0A0J9YX57 407 aa18.76■□□□□ 0.59
HOXB3-204ENST00000465120 C19orf81C9J6K1 198 aa18.76■□□□□ 0.59
HOXB3-204ENST00000465120 GJB1P08034 283 aa18.76■□□□□ 0.59
HOXB3-204ENST00000465120 SLC9C2Q5TAH2 1124 aa18.76■□□□□ 0.59
HOXB3-204ENST00000465120 TTC6Q86TZ1 520 aa18.76■□□□□ 0.59
HOXB3-204ENST00000465120 METTL16Q86W50 562 aaKnown RBP18.76■□□□□ 0.59
HOXB3-204ENST00000465120 ZBTB40Q9NUA8 1239 aa18.76■□□□□ 0.59
HOXB3-204ENST00000465120 SIPA1L1O43166 1804 aa18.76■□□□□ 0.59
HOXB3-204ENST00000465120 FOCADQ5VW36 1801 aa18.76■□□□□ 0.59
HOXB3-204ENST00000465120 MYH1P12882 1939 aa18.75■□□□□ 0.59
HOXB3-204ENST00000465120 GOLIM4O00461 696 aa18.75■□□□□ 0.59
HOXB3-204ENST00000465120 RAB11FIP3O75154 756 aa18.75■□□□□ 0.59
HOXB3-204ENST00000465120 GH2P01242 217 aa18.75■□□□□ 0.59
HOXB3-204ENST00000465120 TMED8Q6PL24 325 aaPredicted RBP18.75■□□□□ 0.59
HOXB3-204ENST00000465120 UNC93B1Q9H1C4 597 aa18.75■□□□□ 0.59
HOXB3-204ENST00000465120 SERPINB13Q9UIV8 391 aa18.75■□□□□ 0.59
HOXB3-204ENST00000465120 LOC285556D6RIA3 1793 aa18.75■□□□□ 0.59
HOXB3-204ENST00000465120 INHAP05111 366 aa18.74■□□□□ 0.59
HOXB3-204ENST00000465120 POLR3DP05423 398 aaPredicted RBP18.74■□□□□ 0.59
HOXB3-204ENST00000465120 GJA8P48165 433 aa18.74■□□□□ 0.59
HOXB3-204ENST00000465120 IRF5Q13568 498 aa18.74■□□□□ 0.59
HOXB3-204ENST00000465120 RAB3GAP1Q15042 981 aa18.74■□□□□ 0.59
HOXB3-204ENST00000465120 PXYLP1Q8TE99 480 aa18.74■□□□□ 0.59
HOXB3-204ENST00000465120 DPF3Q92784 378 aa18.74■□□□□ 0.59
HOXB3-204ENST00000465120 SHISA4Q96DD7 197 aa18.74■□□□□ 0.59
HOXB3-204ENST00000465120 P2RX7Q99572 595 aaKnown RBP18.74■□□□□ 0.59
HOXB3-204ENST00000465120 FEZ1Q99689 392 aa18.74■□□□□ 0.59
HOXB3-204ENST00000465120 PDE6AP16499 860 aa18.73■□□□□ 0.59
HOXB3-204ENST00000465120 ZYXQ15942 572 aaKnown RBP18.73■□□□□ 0.59
HOXB3-204ENST00000465120 CERKLQ49MI3 558 aaPredicted RBP18.73■□□□□ 0.59
HOXB3-204ENST00000465120 USP17L2Q6R6M4 530 aa18.73■□□□□ 0.59
HOXB3-204ENST00000465120 CCAR1Q8IX12 1150 aaKnown RBP18.73■□□□□ 0.59
HOXB3-204ENST00000465120 SIRT2Q8IXJ6 389 aa18.73■□□□□ 0.59
HOXB3-204ENST00000465120 U2AF1L4Q8WU68 220 aaKnown RBP18.73■□□□□ 0.59
HOXB3-204ENST00000465120 CRNKL1Q9BZJ0 848 aaKnown RBP18.73■□□□□ 0.59
HOXB3-204ENST00000465120 CABP5Q9NP86 173 aa18.73■□□□□ 0.59
HOXB3-204ENST00000465120 ZNF532Q9HCE3 1301 aa18.73■□□□□ 0.59
HOXB3-204ENST00000465120 TFRCP02786 760 aaKnown RBP18.72■□□□□ 0.59
HOXB3-204ENST00000465120 HOXA7P31268 230 aaPredicted RBP18.72■□□□□ 0.59
HOXB3-204ENST00000465120 HERVK_113P62684 666 aa18.72■□□□□ 0.59
HOXB3-204ENST00000465120 ABCB5Q2M3G0 1257 aa18.72■□□□□ 0.59
HOXB3-204ENST00000465120 RIOK1Q9BRS2 568 aaKnown RBP18.72■□□□□ 0.59
HOXB3-204ENST00000465120 SGPL1O95470 568 aa18.71■□□□□ 0.59
HOXB3-204ENST00000465120 TATDN1Q6P1N9 297 aa18.71■□□□□ 0.59
HOXB3-204ENST00000465120 GPRC5AQ8NFJ5 357 aa18.71■□□□□ 0.59
HOXB3-204ENST00000465120 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.71■□□□□ 0.59
HOXB3-204ENST00000465120 PAGR1Q9BTK6 254 aa18.71■□□□□ 0.59
HOXB3-204ENST00000465120 EHD4Q9H223 541 aa18.71■□□□□ 0.59
HOXB3-204ENST00000465120 BOLA2Q9H3K6 86 aa18.71■□□□□ 0.59
HOXB3-204ENST00000465120 CWC22Q9HCG8 908 aaKnown RBP18.71■□□□□ 0.59
HOXB3-204ENST00000465120 MCM9Q9NXL9 1143 aa18.71■□□□□ 0.59
HOXB3-204ENST00000465120 PEX10O60683 326 aa18.7■□□□□ 0.58
HOXB3-204ENST00000465120 PLCD1P51178 756 aa18.7■□□□□ 0.58
HOXB3-204ENST00000465120 HABP4Q5JVS0 413 aaKnown RBP18.7■□□□□ 0.58
HOXB3-204ENST00000465120 DOCK3Q8IZD9 2030 aa18.7■□□□□ 0.58
HOXB3-204ENST00000465120 EDC3Q96F86 508 aaKnown RBP18.7■□□□□ 0.58
HOXB3-204ENST00000465120 DEFB118Q96PH6 123 aa18.7■□□□□ 0.58
HOXB3-204ENST00000465120 HTATIP2Q9BUP3 242 aa18.7■□□□□ 0.58
HOXB3-204ENST00000465120 EMILIN3Q9NT22 766 aa18.7■□□□□ 0.58
HOXB3-204ENST00000465120 PAG1Q9NWQ8 432 aa18.7■□□□□ 0.58
HOXB3-204ENST00000465120 MORF4L1Q9UBU8 362 aa18.7■□□□□ 0.58
HOXB3-204ENST00000465120 MPHOSPH10O00566 681 aaKnown RBP18.69■□□□□ 0.58
HOXB3-204ENST00000465120 FARP2O94887 1054 aaPredicted RBP18.69■□□□□ 0.58
HOXB3-204ENST00000465120 C20orf194Q5TEA3 1177 aa18.69■□□□□ 0.58
HOXB3-204ENST00000465120 H0YGN5 161 aa18.68■□□□□ 0.58
HOXB3-204ENST00000465120 CYP2B6P20813 491 aa18.68■□□□□ 0.58
HOXB3-204ENST00000465120 USP14P54578 494 aa18.68■□□□□ 0.58
HOXB3-204ENST00000465120 PDE3AQ14432 1141 aa18.68■□□□□ 0.58
HOXB3-204ENST00000465120 LCORLQ8N3X6 602 aa18.68■□□□□ 0.58
HOXB3-204ENST00000465120 SDR42E1Q8WUS8 393 aa18.68■□□□□ 0.58
HOXB3-204ENST00000465120 LRRCC1Q9C099 1032 aa18.68■□□□□ 0.58
HOXB3-204ENST00000465120 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.68■□□□□ 0.583e-8■■□□□ 14.5
HOXB3-204ENST00000465120 ARMT1Q9H993 441 aa18.68■□□□□ 0.58
HOXB3-204ENST00000465120 TXNRD2Q9NNW7 524 aa18.68■□□□□ 0.58
HOXB3-204ENST00000465120 GJD2Q9UKL4 321 aa18.68■□□□□ 0.58
HOXB3-204ENST00000465120 USP17L15C9J2P7 530 aa18.67■□□□□ 0.58
HOXB3-204ENST00000465120 USP17L13C9JLJ4 530 aa18.67■□□□□ 0.58
HOXB3-204ENST00000465120 USP17L11C9JVI0 530 aa18.67■□□□□ 0.58
HOXB3-204ENST00000465120 USP17L18D6R9N7 530 aa18.67■□□□□ 0.58
HOXB3-204ENST00000465120 USP17L22D6RA61 530 aa18.67■□□□□ 0.58
HOXB3-204ENST00000465120 USP17L17D6RBQ6 530 aa18.67■□□□□ 0.58
HOXB3-204ENST00000465120 USP17L19D6RCP7 530 aa18.67■□□□□ 0.58
HOXB3-204ENST00000465120 USP17L20D6RJB6 530 aa18.67■□□□□ 0.58
HOXB3-204ENST00000465120 HMGCRP04035 888 aa18.67■□□□□ 0.58
HOXB3-204ENST00000465120 ATP5JP18859 108 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms