RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 USP27XA6NNY8 438 aa21.53■■□□□ 1.04
TSPAN4-210ENST00000464987 RIOK3O14730 519 aaKnown RBP21.53■■□□□ 1.04
TSPAN4-210ENST00000464987 RPS6KA4O75676 772 aa21.53■■□□□ 1.04
TSPAN4-210ENST00000464987 PLEKHA8P1O95397 391 aa21.53■■□□□ 1.04
TSPAN4-210ENST00000464987 PKN1Q16512 942 aa21.53■■□□□ 1.04
TSPAN4-210ENST00000464987 KRI1Q8N9T8 703 aaKnown RBP21.53■■□□□ 1.04
TSPAN4-210ENST00000464987 BRIP1Q9BX63 1249 aa21.53■■□□□ 1.04
TSPAN4-210ENST00000464987 FOXP1Q9H334 677 aaPredicted RBP21.53■■□□□ 1.04
TSPAN4-210ENST00000464987 VPS54Q9P1Q0 977 aa21.53■■□□□ 1.04
TSPAN4-210ENST00000464987 NMT2O60551 498 aa21.52■■□□□ 1.04
TSPAN4-210ENST00000464987 LMOD1P29536 600 aaPredicted RBP21.52■■□□□ 1.04
TSPAN4-210ENST00000464987 HSPA1LP34931 641 aa21.52■■□□□ 1.04
TSPAN4-210ENST00000464987 CCZ1BP86790 482 aa21.52■■□□□ 1.04
TSPAN4-210ENST00000464987 CCZ1P86791 482 aaPredicted RBP21.52■■□□□ 1.04
TSPAN4-210ENST00000464987 VPS72Q15906 364 aa21.52■■□□□ 1.04
TSPAN4-210ENST00000464987 KRBA2Q6ZNG9 492 aa21.52■■□□□ 1.04
TSPAN4-210ENST00000464987 FBXO2Q9UK22 296 aaPredicted RBP21.52■■□□□ 1.04
TSPAN4-210ENST00000464987 SMC2O95347 1197 aa21.52■■□□□ 1.04
TSPAN4-210ENST00000464987 ATP1A3P13637 1013 aa21.52■■□□□ 1.04
TSPAN4-210ENST00000464987 GTF2F1P35269 517 aaKnown RBP eCLIP21.52■■□□□ 1.046e-7■■■■■ 38.6
TSPAN4-210ENST00000464987 EARS2Q5JPH6 523 aaKnown RBP21.52■■□□□ 1.04
TSPAN4-210ENST00000464987 CABP5Q9NP86 173 aa21.52■■□□□ 1.04
TSPAN4-210ENST00000464987 TNRC6CQ9HCJ0 1690 aaKnown RBP21.52■■□□□ 1.04
TSPAN4-210ENST00000464987 LAMB1P07942 1786 aa21.52■■□□□ 1.03
TSPAN4-210ENST00000464987 HIBADHP31937 336 aaKnown RBP21.51■■□□□ 1.03
TSPAN4-210ENST00000464987 RCAN1P53805 252 aa21.51■■□□□ 1.03
TSPAN4-210ENST00000464987 FUT2Q10981 343 aa21.51■■□□□ 1.03
TSPAN4-210ENST00000464987 SLC4A8Q2Y0W8 1093 aa21.51■■□□□ 1.03
TSPAN4-210ENST00000464987 IFIT1BQ5T764 474 aaKnown RBP21.51■■□□□ 1.03
TSPAN4-210ENST00000464987 CNNM3Q8NE01 707 aa21.51■■□□□ 1.03
TSPAN4-210ENST00000464987 ZPR1O75312 459 aa21.51■■□□□ 1.03
TSPAN4-210ENST00000464987 CYP2D6P10635 497 aa21.51■■□□□ 1.03
TSPAN4-210ENST00000464987 SKILP12757 684 aa21.51■■□□□ 1.03
TSPAN4-210ENST00000464987 TM4SF1P30408 202 aa21.51■■□□□ 1.03
TSPAN4-210ENST00000464987 RNF26Q9BY78 433 aaPredicted RBP21.51■■□□□ 1.03
TSPAN4-210ENST00000464987 NYXQ9GZU5 481 aa21.51■■□□□ 1.03
TSPAN4-210ENST00000464987 PCDHA5Q9Y5H7 936 aa21.51■■□□□ 1.03
TSPAN4-210ENST00000464987 TAF1LQ8IZX4 1826 aa21.5■■□□□ 1.03
TSPAN4-210ENST00000464987 RILPL1Q5EBL4 403 aa21.5■■□□□ 1.03
TSPAN4-210ENST00000464987 USP49Q70CQ1 688 aa21.5■■□□□ 1.03
TSPAN4-210ENST00000464987 ARHGEF1Q92888 912 aaKnown RBP21.5■■□□□ 1.03
TSPAN4-210ENST00000464987 PDCL3Q9H2J4 239 aa21.5■■□□□ 1.03
TSPAN4-210ENST00000464987 DCP1AQ9NPI6 582 aaPredicted RBP21.5■■□□□ 1.03
TSPAN4-210ENST00000464987 SBF2Q86WG5 1849 aa21.5■■□□□ 1.03
TSPAN4-210ENST00000464987 FGRP09769 529 aa21.49■■□□□ 1.03
TSPAN4-210ENST00000464987 BMP6P22004 513 aa21.49■■□□□ 1.03
TSPAN4-210ENST00000464987 PTPREP23469 700 aa21.49■■□□□ 1.03
TSPAN4-210ENST00000464987 TROAPQ12815 778 aa21.49■■□□□ 1.03
TSPAN4-210ENST00000464987 FAM47AQ5JRC9 791 aa21.49■■□□□ 1.03
TSPAN4-210ENST00000464987 ZNF710Q8N1W2 664 aa21.49■■□□□ 1.03
TSPAN4-210ENST00000464987 EP400Q96L91 3159 aa21.49■■□□□ 1.03
TSPAN4-210ENST00000464987 KIAA1551Q9HCM1 1747 aa21.49■■□□□ 1.03
TSPAN4-210ENST00000464987 WNT7AO00755 349 aa21.49■■□□□ 1.03
TSPAN4-210ENST00000464987 TNNT1P13805 278 aa21.49■■□□□ 1.03
TSPAN4-210ENST00000464987 MDM2Q00987 491 aaPredicted RBP21.49■■□□□ 1.03
TSPAN4-210ENST00000464987 TPD52L1Q16890 204 aaPredicted RBP21.49■■□□□ 1.03
TSPAN4-210ENST00000464987 NOM1Q5C9Z4 860 aaKnown RBP21.49■■□□□ 1.03
TSPAN4-210ENST00000464987 RC3H1Q5TC82 1133 aaKnown RBP21.49■■□□□ 1.03
TSPAN4-210ENST00000464987 CCNL1Q9UK58 526 aaPredicted RBP21.49■■□□□ 1.03
TSPAN4-210ENST00000464987 V9GY48 417 aaPredicted RBP21.49■■□□□ 1.03
TSPAN4-210ENST00000464987 PRR29P0C7W0 189 aa21.48■■□□□ 1.03
TSPAN4-210ENST00000464987 TMC6Q7Z403 805 aa21.48■■□□□ 1.03
TSPAN4-210ENST00000464987 POLR2DO15514 142 aaKnown RBP21.48■■□□□ 1.03
TSPAN4-210ENST00000464987 PDE4BQ07343 736 aa21.48■■□□□ 1.03
TSPAN4-210ENST00000464987 TPTE2Q6XPS3 522 aa21.48■■□□□ 1.03
TSPAN4-210ENST00000464987 CATIPQ7Z7H3 387 aa21.48■■□□□ 1.03
TSPAN4-210ENST00000464987 IQCA1Q86XH1 822 aa21.48■■□□□ 1.03
TSPAN4-210ENST00000464987 GRAMD1CQ8IYS0 662 aa21.48■■□□□ 1.03
TSPAN4-210ENST00000464987 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.48■■□□□ 1.03
TSPAN4-210ENST00000464987 SMTNL1A8MU46 457 aa21.47■■□□□ 1.03
TSPAN4-210ENST00000464987 SEMA3EO15041 775 aa21.47■■□□□ 1.03
TSPAN4-210ENST00000464987 PDILTQ8N807 584 aa21.47■■□□□ 1.03
TSPAN4-210ENST00000464987 DPF2Q92785 391 aa21.47■■□□□ 1.03
TSPAN4-210ENST00000464987 SERTAD1Q9UHV2 236 aa21.47■■□□□ 1.03
TSPAN4-210ENST00000464987 RTCBQ9Y3I0 505 aaKnown RBP21.47■■□□□ 1.03
TSPAN4-210ENST00000464987 IKBKBO14920 756 aa21.47■■□□□ 1.03
TSPAN4-210ENST00000464987 FANCCQ00597 558 aa21.47■■□□□ 1.03
TSPAN4-210ENST00000464987 AKAP17AQ02040 695 aaKnown RBP21.47■■□□□ 1.03
TSPAN4-210ENST00000464987 PTPN21Q16825 1174 aa21.47■■□□□ 1.03
TSPAN4-210ENST00000464987 PHF20Q9BVI0 1012 aa21.47■■□□□ 1.03
TSPAN4-210ENST00000464987 OSBPL5Q9H0X9 879 aaPredicted RBP21.47■■□□□ 1.03
TSPAN4-210ENST00000464987 IRS2Q9Y4H2 1338 aa21.46■■□□□ 1.03
TSPAN4-210ENST00000464987 NEMFO60524 1076 aa21.46■■□□□ 1.03
TSPAN4-210ENST00000464987 ARMCX5Q6P1M9 558 aa21.46■■□□□ 1.03
TSPAN4-210ENST00000464987 ARID3AQ99856 593 aa21.46■■□□□ 1.03
TSPAN4-210ENST00000464987 CSRNP2Q9H175 543 aa21.46■■□□□ 1.03
TSPAN4-210ENST00000464987 TRMT1Q9NXH9 659 aaKnown RBP21.46■■□□□ 1.03
TSPAN4-210ENST00000464987 MAST2Q6P0Q8 1798 aa21.46■■□□□ 1.03
TSPAN4-210ENST00000464987 PRPF3O43395 683 aaKnown RBP21.45■■□□□ 1.03
TSPAN4-210ENST00000464987 ANKRD2Q9GZV1 360 aa21.45■■□□□ 1.03
TSPAN4-210ENST00000464987 NHSQ6T4R5 1651 aa21.45■■□□□ 1.02
TSPAN4-210ENST00000464987 SRPRBQ9Y5M8 271 aaKnown RBP21.45■■□□□ 1.02
TSPAN4-210ENST00000464987 RGL2O15211 777 aa21.44■■□□□ 1.02
TSPAN4-210ENST00000464987 VEGFAP15692 232 aaPredicted RBP21.44■■□□□ 1.02
TSPAN4-210ENST00000464987 PPP2R5BQ15173 497 aa21.44■■□□□ 1.02
TSPAN4-210ENST00000464987 NPY5RQ15761 445 aa21.44■■□□□ 1.02
TSPAN4-210ENST00000464987 SRBD1Q8N5C6 995 aaKnown RBP21.44■■□□□ 1.02
TSPAN4-210ENST00000464987 CRNKL1Q9BZJ0 848 aaKnown RBP21.44■■□□□ 1.02
TSPAN4-210ENST00000464987 USP17L8P0C7I0 530 aa21.44■■□□□ 1.02
TSPAN4-210ENST00000464987 TPM4P67936 248 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms