RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 KSR2Q6VAB6 950 aa13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 GBP6Q6ZN66 633 aa13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 SPATS2Q86XZ4 545 aaKnown RBP13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 CCDC148Q8NFR7 591 aa13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 NAPGQ99747 312 aaPredicted RBP13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 HELLSQ9NRZ9 838 aa13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 RAI14Q9P0K7 980 aa13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 CHPF2Q9P2E5 772 aa13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 COL15A1P39059 1388 aa13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 LRRIQ3A6PVS8 624 aaPredicted RBP13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 NPM3O75607 178 aaKnown RBP13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 MNAT1P51948 309 aa13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 ADKP55263 362 aaKnown RBP13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 GOLGA8FQ08AF8 430 aa13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 GOLGA8DPQ0D2H9 430 aa13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 E2F4Q16254 413 aa13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 ZNF569Q5MCW4 686 aa13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 STOX1Q6ZVD7 989 aa13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 TRIML1Q8N9V2 468 aa13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 SMARCC1Q92922 1105 aaPredicted RBP13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 RPGRIP1Q96KN7 1286 aa13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 ZSWIM4Q9H7M6 989 aa13.08□□□□□ -0.32
TNRC6A-205ENST00000464539 TARSL2A2RTX5 802 aaKnown RBP13.07□□□□□ -0.32
TNRC6A-205ENST00000464539 FECHP22830 423 aa13.07□□□□□ -0.32
TNRC6A-205ENST00000464539 CNPY4Q8N129 248 aa13.07□□□□□ -0.32
TNRC6A-205ENST00000464539 LINS1Q8NG48 757 aa13.07□□□□□ -0.32
TNRC6A-205ENST00000464539 LTV1Q96GA3 475 aaPredicted RBP13.07□□□□□ -0.32
TNRC6A-205ENST00000464539 LRRC2Q9BYS8 371 aa13.07□□□□□ -0.32
TNRC6A-205ENST00000464539 CDHR2Q9BYE9 1310 aa13.07□□□□□ -0.32
TNRC6A-205ENST00000464539 PALLDQ8WX93 1383 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 GRM8O00222 908 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 POLR3DP05423 398 aaPredicted RBP13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 HTRA3P83110 453 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 RESP18Q5W5W9 173 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 ISM2Q6H9L7 571 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 PPFIBP1Q86W92 1011 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 SEC62Q99442 399 aaKnown RBP13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 TLR7Q9NYK1 1049 aaKnown RBP13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 FAM169AQ9Y6X4 670 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 ZNF609O15014 1411 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 A0A1B0GTH6 734 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 RHOXF2BP0C7M4 288 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 USP14P54578 494 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 PPFIA1Q13136 1202 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 NT5DC1Q5TFE4 455 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 CEP120Q8N960 986 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 FAM76AQ8TAV0 307 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 HAUS7Q99871 368 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 RHOXF2Q9BQY4 288 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 DESI2Q9BSY9 194 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 SUGCTQ9HAC7 445 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 HPCAL4Q9UM19 191 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 SUFUQ9UMX1 484 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 MAP3K2Q9Y2U5 619 aa13.06□□□□□ -0.32
TNRC6A-205ENST00000464539 MEGF6O75095 1541 aa13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 C4BP0C0L5 1744 aa13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 SHTN1A0MZ66 631 aa13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 E7EWF7 191 aa13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 C21orf2O43822 256 aa13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 PHACTR2O75167 634 aa13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 SLC34A2O95436 690 aa13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 ERCC5P28715 1186 aaPredicted RBP13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 INPP5BP32019 993 aa13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 KIF23Q02241 960 aaPredicted RBP13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 STIM1Q13586 685 aa13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 B4GALNT4Q76KP1 1039 aa13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 TMTC1Q8IUR5 882 aa13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 IGSF22Q8N9C0 903 aa13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 PRPF38AQ8NAV1 312 aaKnown RBP13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 COG1Q8WTW3 980 aa13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 SUCLG2Q96I99 432 aa13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 NCOA5Q9HCD5 579 aaKnown RBP13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 LZTFL1Q9NQ48 299 aa13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 MYO6Q9UM54 1294 aa13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 PCDHA5Q9Y5H7 936 aa13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 TAF1LQ8IZX4 1826 aa13.05□□□□□ -0.32
TNRC6A-205ENST00000464539 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 BRD2P25440 801 aaKnown RBP13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 IRAK1P51617 712 aa13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 PNOCQ13519 176 aa13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 WWC2Q6AWC2 1192 aa13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 CNGA4Q8IV77 575 aa13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 SLC35F6Q8N357 371 aa13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 CTAGE1Q96RT6 745 aa13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 NFE2L3Q9Y4A8 694 aa13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 KDM6AO15550 1401 aaPredicted RBP13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 SOWAHDA6NJG2 315 aa13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 SEMA3EO15041 775 aa13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 MDM2Q00987 491 aaPredicted RBP13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 KANK3Q6NY19 840 aa13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 SHC4Q6S5L8 630 aa13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 RAD9BQ6WBX8 426 aa13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 METTL16Q86W50 562 aaKnown RBP13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 KBTBD3Q8NAB2 608 aa13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 RUBCNQ92622 972 aa13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 KAT2BQ92831 832 aa13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 IRX2Q9BZI1 471 aaPredicted RBP13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 COPRSQ9NQ92 184 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms