RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 ZBTB21Q9ULJ3 1066 aa22.89■■□□□ 1.25
SF3A1-205ENST00000463818 C19orf81C9J6K1 198 aa22.88■■□□□ 1.25
SF3A1-205ENST00000463818 USP17L10C9JJH3 530 aa22.88■■□□□ 1.25
SF3A1-205ENST00000463818 TNPO2O14787 897 aaKnown RBP22.88■■□□□ 1.25
SF3A1-205ENST00000463818 GCLCP48506 637 aaPredicted RBP22.88■■□□□ 1.25
SF3A1-205ENST00000463818 FLT3LGP49771 235 aa22.88■■□□□ 1.25
SF3A1-205ENST00000463818 FAM110CQ1W6H9 321 aa22.88■■□□□ 1.25
SF3A1-205ENST00000463818 PHIPQ8WWQ0 1821 aa22.87■■□□□ 1.25
SF3A1-205ENST00000463818 TATDN1Q6P1N9 297 aa22.87■■□□□ 1.25
SF3A1-205ENST00000463818 EDC3Q96F86 508 aaKnown RBP22.87■■□□□ 1.25
SF3A1-205ENST00000463818 BOLA2Q9H3K6 86 aa22.87■■□□□ 1.25
SF3A1-205ENST00000463818 SERPINB13Q9UIV8 391 aa22.87■■□□□ 1.25
SF3A1-205ENST00000463818 MAST2Q6P0Q8 1798 aa22.86■■□□□ 1.25
SF3A1-205ENST00000463818 ZNF532Q9HCE3 1301 aa22.86■■□□□ 1.25
SF3A1-205ENST00000463818 MYO5AQ9Y4I1 1855 aaKnown RBP22.86■■□□□ 1.25
SF3A1-205ENST00000463818 ADCY3O60266 1144 aa22.86■■□□□ 1.25
SF3A1-205ENST00000463818 GH2P01242 217 aa22.86■■□□□ 1.25
SF3A1-205ENST00000463818 HOXA7P31268 230 aaPredicted RBP22.86■■□□□ 1.25
SF3A1-205ENST00000463818 PLCD1P51178 756 aa22.86■■□□□ 1.25
SF3A1-205ENST00000463818 UBXN2AP68543 259 aa22.86■■□□□ 1.25
SF3A1-205ENST00000463818 SLAIN1Q8ND83 568 aa22.86■■□□□ 1.25
SF3A1-205ENST00000463818 COA7Q96BR5 231 aa22.86■■□□□ 1.25
SF3A1-205ENST00000463818 P2RX7Q99572 595 aaKnown RBP22.86■■□□□ 1.25
SF3A1-205ENST00000463818 EHD4Q9H223 541 aa22.86■■□□□ 1.25
SF3A1-205ENST00000463818 CENPFP49454 3210 aa22.85■■□□□ 1.25
SF3A1-205ENST00000463818 CCL5P13501 91 aa22.85■■□□□ 1.25
SF3A1-205ENST00000463818 ATP5JP18859 108 aa22.85■■□□□ 1.25
SF3A1-205ENST00000463818 CRNKL1Q9BZJ0 848 aaKnown RBP22.85■■□□□ 1.25
SF3A1-205ENST00000463818 TCRBV5S4A2TA0A5A2 114 aa22.84■■□□□ 1.25
SF3A1-205ENST00000463818 POLR3DP05423 398 aaPredicted RBP22.84■■□□□ 1.25
SF3A1-205ENST00000463818 IRX3P78415 501 aaPredicted RBP22.84■■□□□ 1.25
SF3A1-205ENST00000463818 CERKLQ49MI3 558 aaPredicted RBP22.84■■□□□ 1.25
SF3A1-205ENST00000463818 RNF208Q9H0X6 261 aa22.84■■□□□ 1.25
SF3A1-205ENST00000463818 EMILIN3Q9NT22 766 aa22.84■■□□□ 1.25
SF3A1-205ENST00000463818 PAG1Q9NWQ8 432 aa22.84■■□□□ 1.25
SF3A1-205ENST00000463818 SMARCA5O60264 1052 aaPredicted RBP22.83■■□□□ 1.25
SF3A1-205ENST00000463818 GJB1P08034 283 aa22.83■■□□□ 1.25
SF3A1-205ENST00000463818 ELNP15502 786 aa22.83■■□□□ 1.25
SF3A1-205ENST00000463818 IRF5Q13568 498 aa22.83■■□□□ 1.25
SF3A1-205ENST00000463818 PXYLP1Q8TE99 480 aa22.83■■□□□ 1.25
SF3A1-205ENST00000463818 LRRCC1Q9C099 1032 aa22.83■■□□□ 1.25
SF3A1-205ENST00000463818 SIPA1L1O43166 1804 aa22.82■■□□□ 1.24
SF3A1-205ENST00000463818 PTPRFP10586 1907 aa22.82■■□□□ 1.24
SF3A1-205ENST00000463818 SLC34A2O95436 690 aa22.82■■□□□ 1.24
SF3A1-205ENST00000463818 USP17L2Q6R6M4 530 aa22.82■■□□□ 1.24
SF3A1-205ENST00000463818 LCORLQ8N3X6 602 aa22.82■■□□□ 1.24
SF3A1-205ENST00000463818 NKX2-3Q8TAU0 364 aa22.82■■□□□ 1.24
SF3A1-205ENST00000463818 HAUS7Q99871 368 aa22.82■■□□□ 1.24
SF3A1-205ENST00000463818 MCM9Q9NXL9 1143 aa22.82■■□□□ 1.24
SF3A1-205ENST00000463818 MORF4L1Q9UBU8 362 aa22.82■■□□□ 1.24
SF3A1-205ENST00000463818 TAOK2Q9UL54 1235 aa22.82■■□□□ 1.24
SF3A1-205ENST00000463818 SHMT1P34896 483 aa22.81■■□□□ 1.24
SF3A1-205ENST00000463818 RAB3GAP1Q15042 981 aa22.81■■□□□ 1.24
SF3A1-205ENST00000463818 ABCB5Q2M3G0 1257 aa22.81■■□□□ 1.24
SF3A1-205ENST00000463818 SLFNL1Q499Z3 407 aa22.81■■□□□ 1.24
SF3A1-205ENST00000463818 SHISA4Q96DD7 197 aa22.81■■□□□ 1.24
SF3A1-205ENST00000463818 UNC93B1Q9H1C4 597 aa22.81■■□□□ 1.24
SF3A1-205ENST00000463818 CABP5Q9NP86 173 aa22.81■■□□□ 1.24
SF3A1-205ENST00000463818 PEX10O60683 326 aa22.8■■□□□ 1.24
SF3A1-205ENST00000463818 ADD2P35612 726 aa22.8■■□□□ 1.24
SF3A1-205ENST00000463818 GJA8P48165 433 aa22.8■■□□□ 1.24
SF3A1-205ENST00000463818 HERVK_113P62684 666 aa22.8■■□□□ 1.24
SF3A1-205ENST00000463818 GABPAQ06546 454 aa22.8■■□□□ 1.24
SF3A1-205ENST00000463818 SDR42E1Q8WUS8 393 aa22.8■■□□□ 1.24
SF3A1-205ENST00000463818 ARMT1Q9H993 441 aa22.8■■□□□ 1.24
SF3A1-205ENST00000463818 DCP1AQ9NPI6 582 aaPredicted RBP22.8■■□□□ 1.24
SF3A1-205ENST00000463818 GJD2Q9UKL4 321 aa22.8■■□□□ 1.24
SF3A1-205ENST00000463818 INHAP05111 366 aa22.79■■□□□ 1.24
SF3A1-205ENST00000463818 EVX2Q03828 476 aa22.79■■□□□ 1.24
SF3A1-205ENST00000463818 ZYXQ15942 572 aaKnown RBP22.79■■□□□ 1.24
SF3A1-205ENST00000463818 GPRC5AQ8NFJ5 357 aa22.79■■□□□ 1.24
SF3A1-205ENST00000463818 FEZ1Q99689 392 aa22.79■■□□□ 1.24
SF3A1-205ENST00000463818 TXNRD2Q9NNW7 524 aa22.79■■□□□ 1.24
SF3A1-205ENST00000463818 RBPJLQ9UBG7 517 aa22.79■■□□□ 1.24
SF3A1-205ENST00000463818 RBBP6Q7Z6E9 1792 aaKnown RBP22.78■■□□□ 1.24
SF3A1-205ENST00000463818 PRKAB2O43741 272 aa22.78■■□□□ 1.24
SF3A1-205ENST00000463818 ACER1Q8TDN7 264 aa22.78■■□□□ 1.24
SF3A1-205ENST00000463818 CDK5RAP2Q96SN8 1893 aa22.78■■□□□ 1.24
SF3A1-205ENST00000463818 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.78■■□□□ 1.24
SF3A1-205ENST00000463818 DCTPP1Q9H773 170 aa22.78■■□□□ 1.24
SF3A1-205ENST00000463818 MBD4O95243 580 aa22.77■■□□□ 1.24
SF3A1-205ENST00000463818 CHGBP05060 677 aa22.77■■□□□ 1.24
SF3A1-205ENST00000463818 CYP2D6P10635 497 aa22.77■■□□□ 1.24
SF3A1-205ENST00000463818 GUCY1A2P33402 732 aa22.77■■□□□ 1.24
SF3A1-205ENST00000463818 USP14P54578 494 aa22.77■■□□□ 1.24
SF3A1-205ENST00000463818 Q3C1V9 767 aa22.77■■□□□ 1.24
SF3A1-205ENST00000463818 U2AF1L4Q8WU68 220 aaKnown RBP22.77■■□□□ 1.24
SF3A1-205ENST00000463818 C12orf42Q96LP6 360 aa22.77■■□□□ 1.24
SF3A1-205ENST00000463818 FOCADQ5VW36 1801 aa22.77■■□□□ 1.24
SF3A1-205ENST00000463818 ATAD5Q96QE3 1844 aa22.76■■□□□ 1.23
SF3A1-205ENST00000463818 USP17L15C9J2P7 530 aa22.76■■□□□ 1.23
SF3A1-205ENST00000463818 USP17L13C9JLJ4 530 aa22.76■■□□□ 1.23
SF3A1-205ENST00000463818 USP17L11C9JVI0 530 aa22.76■■□□□ 1.23
SF3A1-205ENST00000463818 USP17L18D6R9N7 530 aa22.76■■□□□ 1.23
SF3A1-205ENST00000463818 USP17L22D6RA61 530 aa22.76■■□□□ 1.23
SF3A1-205ENST00000463818 USP17L17D6RBQ6 530 aa22.76■■□□□ 1.23
SF3A1-205ENST00000463818 USP17L19D6RCP7 530 aa22.76■■□□□ 1.23
SF3A1-205ENST00000463818 USP17L20D6RJB6 530 aa22.76■■□□□ 1.23
SF3A1-205ENST00000463818 SGPL1O95470 568 aa22.76■■□□□ 1.23
SF3A1-205ENST00000463818 USP17L24Q0WX57 530 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms