RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 GRK4P32298 578 aa24.94■■□□□ 1.58
PDLIM4-205ENST00000463615 SLC9C2Q5TAH2 1124 aa24.94■■□□□ 1.58
PDLIM4-205ENST00000463615 TTC6Q86TZ1 520 aa24.94■■□□□ 1.58
PDLIM4-205ENST00000463615 RAET1EQ8TD07 263 aa24.94■■□□□ 1.58
PDLIM4-205ENST00000463615 SERPINB13Q9UIV8 391 aa24.94■■□□□ 1.58
PDLIM4-205ENST00000463615 BRCA2P51587 3418 aa24.93■■□□□ 1.58
PDLIM4-205ENST00000463615 DDX60LQ5H9U9 1706 aaKnown RBP24.93■■□□□ 1.58
PDLIM4-205ENST00000463615 TCRBV5S4A2TA0A5A2 114 aa24.93■■□□□ 1.58
PDLIM4-205ENST00000463615 PRKCZQ05513 592 aa24.93■■□□□ 1.58
PDLIM4-205ENST00000463615 MAGEB6P1A0A0J9YX57 407 aa24.92■■□□□ 1.58
PDLIM4-205ENST00000463615 GOLIM4O00461 696 aa24.92■■□□□ 1.58
PDLIM4-205ENST00000463615 IRF5Q13568 498 aa24.92■■□□□ 1.58
PDLIM4-205ENST00000463615 SLC4A8Q2Y0W8 1093 aa24.92■■□□□ 1.58
PDLIM4-205ENST00000463615 ASCC2Q9H1I8 757 aaPredicted RBP24.92■■□□□ 1.58
PDLIM4-205ENST00000463615 ZNF532Q9HCE3 1301 aa24.91■■□□□ 1.58
PDLIM4-205ENST00000463615 USP17L10C9JJH3 530 aa24.91■■□□□ 1.58
PDLIM4-205ENST00000463615 MTMR2Q13614 643 aa24.91■■□□□ 1.58
PDLIM4-205ENST00000463615 ANKRD13CQ8N6S4 541 aa24.91■■□□□ 1.58
PDLIM4-205ENST00000463615 SLAIN1Q8ND83 568 aa24.91■■□□□ 1.58
PDLIM4-205ENST00000463615 DNAJC2Q99543 621 aaKnown RBP24.91■■□□□ 1.58
PDLIM4-205ENST00000463615 LRRCC1Q9C099 1032 aa24.91■■□□□ 1.58
PDLIM4-205ENST00000463615 TAOK2Q9UL54 1235 aa24.91■■□□□ 1.58
PDLIM4-205ENST00000463615 ECM2O94769 699 aaPredicted RBP24.9■■□□□ 1.58
PDLIM4-205ENST00000463615 GDF11O95390 407 aa24.9■■□□□ 1.58
PDLIM4-205ENST00000463615 SHROOM1Q2M3G4 852 aaPredicted RBP24.9■■□□□ 1.58
PDLIM4-205ENST00000463615 PXYLP1Q8TE99 480 aa24.9■■□□□ 1.58
PDLIM4-205ENST00000463615 HAUS7Q99871 368 aa24.9■■□□□ 1.58
PDLIM4-205ENST00000463615 CRNKL1Q9BZJ0 848 aaKnown RBP24.9■■□□□ 1.58
PDLIM4-205ENST00000463615 PAG1Q9NWQ8 432 aa24.9■■□□□ 1.58
PDLIM4-205ENST00000463615 TMOD4Q9NZQ9 345 aa24.9■■□□□ 1.58
PDLIM4-205ENST00000463615 MORF4L1Q9UBU8 362 aa24.9■■□□□ 1.58
PDLIM4-205ENST00000463615 GABRQQ9UN88 632 aa24.9■■□□□ 1.58
PDLIM4-205ENST00000463615 TNPO2O14787 897 aaKnown RBP24.89■■□□□ 1.58
PDLIM4-205ENST00000463615 GABPAQ06546 454 aa24.89■■□□□ 1.58
PDLIM4-205ENST00000463615 GH2P01242 217 aa24.88■■□□□ 1.57
PDLIM4-205ENST00000463615 FLT3LGP49771 235 aa24.88■■□□□ 1.57
PDLIM4-205ENST00000463615 MTFR1Q15390 333 aa24.88■■□□□ 1.57
PDLIM4-205ENST00000463615 C12orf42Q96LP6 360 aa24.88■■□□□ 1.57
PDLIM4-205ENST00000463615 SHMT1P34896 483 aa24.87■■□□□ 1.57
PDLIM4-205ENST00000463615 ADD2P35612 726 aa24.87■■□□□ 1.57
PDLIM4-205ENST00000463615 PLCD1P51178 756 aa24.87■■□□□ 1.57
PDLIM4-205ENST00000463615 COA7Q96BR5 231 aa24.87■■□□□ 1.57
PDLIM4-205ENST00000463615 EDC3Q96F86 508 aaKnown RBP24.87■■□□□ 1.57
PDLIM4-205ENST00000463615 BOLA2Q9H3K6 86 aa24.87■■□□□ 1.57
PDLIM4-205ENST00000463615 DCTPP1Q9H773 170 aa24.87■■□□□ 1.57
PDLIM4-205ENST00000463615 MKI67P46013 3256 aaKnown RBP24.87■■□□□ 1.57
PDLIM4-205ENST00000463615 GJB1P08034 283 aa24.86■■□□□ 1.57
PDLIM4-205ENST00000463615 UBXN2AP68543 259 aa24.86■■□□□ 1.57
PDLIM4-205ENST00000463615 USP17L2Q6R6M4 530 aa24.86■■□□□ 1.57
PDLIM4-205ENST00000463615 NKX2-3Q8TAU0 364 aa24.86■■□□□ 1.57
PDLIM4-205ENST00000463615 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.86■■□□□ 1.57
PDLIM4-205ENST00000463615 DCP1AQ9NPI6 582 aaPredicted RBP24.86■■□□□ 1.57
PDLIM4-205ENST00000463615 EMILIN3Q9NT22 766 aa24.86■■□□□ 1.57
PDLIM4-205ENST00000463615 NAV1Q8NEY1 1877 aa24.85■■□□□ 1.57
PDLIM4-205ENST00000463615 ADCY3O60266 1144 aa24.85■■□□□ 1.57
PDLIM4-205ENST00000463615 IRX3P78415 501 aaPredicted RBP24.85■■□□□ 1.57
PDLIM4-205ENST00000463615 UBE3CQ15386 1083 aa24.85■■□□□ 1.57
PDLIM4-205ENST00000463615 CERKLQ49MI3 558 aaPredicted RBP24.85■■□□□ 1.57
PDLIM4-205ENST00000463615 LCORLQ8N3X6 602 aa24.85■■□□□ 1.57
PDLIM4-205ENST00000463615 POLR3DP05423 398 aaPredicted RBP24.84■■□□□ 1.57
PDLIM4-205ENST00000463615 CCL5P13501 91 aa24.84■■□□□ 1.57
PDLIM4-205ENST00000463615 CAPN2P17655 700 aa24.84■■□□□ 1.57
PDLIM4-205ENST00000463615 GJA8P48165 433 aa24.84■■□□□ 1.57
PDLIM4-205ENST00000463615 ABCB5Q2M3G0 1257 aa24.84■■□□□ 1.57
PDLIM4-205ENST00000463615 GTF3C2Q8WUA4 911 aaPredicted RBP24.84■■□□□ 1.57
PDLIM4-205ENST00000463615 SHISA4Q96DD7 197 aa24.84■■□□□ 1.57
PDLIM4-205ENST00000463615 P2RX7Q99572 595 aaKnown RBP24.84■■□□□ 1.57
PDLIM4-205ENST00000463615 KIAA1683Q9H0B3 1180 aa24.84■■□□□ 1.57
PDLIM4-205ENST00000463615 MCM9Q9NXL9 1143 aa24.84■■□□□ 1.57
PDLIM4-205ENST00000463615 DOCK3Q8IZD9 2030 aa24.83■■□□□ 1.57
PDLIM4-205ENST00000463615 SLC34A2O95436 690 aa24.83■■□□□ 1.57
PDLIM4-205ENST00000463615 MYCP01106 439 aaPredicted RBP24.83■■□□□ 1.57
PDLIM4-205ENST00000463615 HERVK_113P62684 666 aa24.83■■□□□ 1.57
PDLIM4-205ENST00000463615 CABP5Q9NP86 173 aa24.83■■□□□ 1.57
PDLIM4-205ENST00000463615 ATP8A2Q9NTI2 1148 aa24.83■■□□□ 1.57
PDLIM4-205ENST00000463615 GJD2Q9UKL4 321 aa24.83■■□□□ 1.57
PDLIM4-205ENST00000463615 USP14P54578 494 aa24.82■■□□□ 1.56
PDLIM4-205ENST00000463615 SDR42E1Q8WUS8 393 aa24.82■■□□□ 1.56
PDLIM4-205ENST00000463615 SMARCA5O60264 1052 aaPredicted RBP24.81■■□□□ 1.56
PDLIM4-205ENST00000463615 GUCY1A2P33402 732 aa24.81■■□□□ 1.56
PDLIM4-205ENST00000463615 ZSCAN25Q6NSZ9 544 aa24.81■■□□□ 1.56
PDLIM4-205ENST00000463615 UBE2Q1Q7Z7E8 422 aa24.81■■□□□ 1.56
PDLIM4-205ENST00000463615 RNF208Q9H0X6 261 aa24.81■■□□□ 1.56
PDLIM4-205ENST00000463615 ARMT1Q9H993 441 aa24.81■■□□□ 1.56
PDLIM4-205ENST00000463615 ECHDC1Q9NTX5 307 aa24.81■■□□□ 1.56
PDLIM4-205ENST00000463615 BIN2Q9UBW5 565 aaPredicted RBP24.81■■□□□ 1.56
PDLIM4-205ENST00000463615 GPRC5AQ8NFJ5 357 aa24.8■■□□□ 1.56
PDLIM4-205ENST00000463615 TXNRD2Q9NNW7 524 aa24.8■■□□□ 1.56
PDLIM4-205ENST00000463615 RBPJLQ9UBG7 517 aa24.8■■□□□ 1.56
PDLIM4-205ENST00000463615 SWAP70Q9UH65 585 aa24.8■■□□□ 1.56
PDLIM4-205ENST00000463615 MBD4O95243 580 aa24.79■■□□□ 1.56
PDLIM4-205ENST00000463615 INHAP05111 366 aa24.79■■□□□ 1.56
PDLIM4-205ENST00000463615 ELNP15502 786 aa24.79■■□□□ 1.56
PDLIM4-205ENST00000463615 RAB3GAP1Q15042 981 aa24.79■■□□□ 1.56
PDLIM4-205ENST00000463615 MYH7P12883 1935 aa24.78■■□□□ 1.56
PDLIM4-205ENST00000463615 USP17L15C9J2P7 530 aa24.78■■□□□ 1.56
PDLIM4-205ENST00000463615 USP17L13C9JLJ4 530 aa24.78■■□□□ 1.56
PDLIM4-205ENST00000463615 USP17L11C9JVI0 530 aa24.78■■□□□ 1.56
PDLIM4-205ENST00000463615 USP17L18D6R9N7 530 aa24.78■■□□□ 1.56
PDLIM4-205ENST00000463615 USP17L22D6RA61 530 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms