RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 SF3B2Q13435 895 aaKnown RBP5.06□□□□□ -1.6
NDUFA4-202ENST00000463308 RALGPS1Q5JS13 557 aa5.06□□□□□ -1.6
NDUFA4-202ENST00000463308 INTS4Q96HW7 963 aaKnown RBP5.06□□□□□ -1.6
NDUFA4-202ENST00000463308 SGPP1Q9BX95 441 aa5.06□□□□□ -1.6
NDUFA4-202ENST00000463308 ST14Q9Y5Y6 855 aa5.06□□□□□ -1.6
NDUFA4-202ENST00000463308 PPP1R15AO75807 674 aaPredicted RBP5.05□□□□□ -1.6
NDUFA4-202ENST00000463308 GSTP1P09211 210 aaKnown RBP5.05□□□□□ -1.6
NDUFA4-202ENST00000463308 MPSTP25325 297 aa5.05□□□□□ -1.6
NDUFA4-202ENST00000463308 MAGEA10P43363 369 aaPredicted RBP5.05□□□□□ -1.6
NDUFA4-202ENST00000463308 TMPRSS7Q7RTY8 843 aa5.05□□□□□ -1.6
NDUFA4-202ENST00000463308 PDZD8Q8NEN9 1154 aa5.05□□□□□ -1.6
NDUFA4-202ENST00000463308 PANK1Q8TE04 598 aa5.05□□□□□ -1.6
NDUFA4-202ENST00000463308 GTF3C2Q8WUA4 911 aaPredicted RBP5.05□□□□□ -1.6
NDUFA4-202ENST00000463308 MRIQ9BWK5 157 aa5.05□□□□□ -1.6
NDUFA4-202ENST00000463308 ZC3H12CQ9C0D7 883 aaKnown RBP5.05□□□□□ -1.6
NDUFA4-202ENST00000463308 FOXD3Q9UJU5 478 aaPredicted RBP5.05□□□□□ -1.6
NDUFA4-202ENST00000463308 GTF3C3Q9Y5Q9 886 aa5.05□□□□□ -1.6
NDUFA4-202ENST00000463308 GDF5P43026 501 aa5.04□□□□□ -1.6
NDUFA4-202ENST00000463308 RTP5Q14D33 572 aa5.04□□□□□ -1.6
NDUFA4-202ENST00000463308 ZC3H12AQ5D1E8 599 aaKnown RBP5.04□□□□□ -1.6
NDUFA4-202ENST00000463308 ZFYVE27Q5T4F4 411 aa5.04□□□□□ -1.6
NDUFA4-202ENST00000463308 SFRP5Q5T4F7 317 aa5.04□□□□□ -1.6
NDUFA4-202ENST00000463308 OXR1Q8N573 874 aa5.04□□□□□ -1.6
NDUFA4-202ENST00000463308 SYT8Q8NBV8 401 aa5.04□□□□□ -1.6
NDUFA4-202ENST00000463308 ZFYVE28Q9HCC9 887 aa5.04□□□□□ -1.6
NDUFA4-202ENST00000463308 POLIQ9UNA4 740 aa5.04□□□□□ -1.6
NDUFA4-202ENST00000463308 YBX2Q9Y2T7 364 aaKnown RBP5.04□□□□□ -1.6
NDUFA4-202ENST00000463308 TRHRP34981 398 aaPredicted RBP5.03□□□□□ -1.6
NDUFA4-202ENST00000463308 RPS26P11Q5JNZ5 115 aaPredicted RBP5.03□□□□□ -1.6
NDUFA4-202ENST00000463308 UBE2FQ969M7 185 aa5.03□□□□□ -1.6
NDUFA4-202ENST00000463308 CAPN6Q9Y6Q1 641 aa5.03□□□□□ -1.6
NDUFA4-202ENST00000463308 FITM1A5D6W6 292 aa5.02□□□□□ -1.61
NDUFA4-202ENST00000463308 PRR33A8MZF0 331 aa5.02□□□□□ -1.61
NDUFA4-202ENST00000463308 CYR61O00622 381 aa5.02□□□□□ -1.61
NDUFA4-202ENST00000463308 ABL1P00519 1130 aa5.02□□□□□ -1.61
NDUFA4-202ENST00000463308 PDE6BP35913 854 aa5.02□□□□□ -1.61
NDUFA4-202ENST00000463308 NR0B2Q15466 257 aa5.02□□□□□ -1.61
NDUFA4-202ENST00000463308 CRB2Q5IJ48 1285 aa5.02□□□□□ -1.61
NDUFA4-202ENST00000463308 SP110Q9HB58 689 aa5.02□□□□□ -1.61
NDUFA4-202ENST00000463308 C1QTNF3-AMACRE9PGA6 284 aa5.01□□□□□ -1.61
NDUFA4-202ENST00000463308 HRKO00198 91 aa5.01□□□□□ -1.61
NDUFA4-202ENST00000463308 ADAM17P78536 824 aa5.01□□□□□ -1.61
NDUFA4-202ENST00000463308 FKBP4Q02790 459 aaKnown RBP eCLIP5.01□□□□□ -1.61
NDUFA4-202ENST00000463308 SNX17Q15036 470 aa5.01□□□□□ -1.61
NDUFA4-202ENST00000463308 GALNT12Q8IXK2 581 aa5.01□□□□□ -1.61
NDUFA4-202ENST00000463308 LINC01356Q8N9X3 169 aa5.01□□□□□ -1.61
NDUFA4-202ENST00000463308 ADAMTS10Q9H324 1103 aa5.01□□□□□ -1.61
NDUFA4-202ENST00000463308 ARID3CA6NKF2 412 aa5□□□□□ -1.61
NDUFA4-202ENST00000463308 NDUFB5O43674 189 aa5□□□□□ -1.61
NDUFA4-202ENST00000463308 FGD1P98174 961 aa5□□□□□ -1.61
NDUFA4-202ENST00000463308 PDE3BQ13370 1112 aa5□□□□□ -1.61
NDUFA4-202ENST00000463308 KCT2Q8NC54 265 aa5□□□□□ -1.61
NDUFA4-202ENST00000463308 C19orf44Q9H6X5 657 aa5□□□□□ -1.61
NDUFA4-202ENST00000463308 ZSWIM5Q9P217 1185 aa5□□□□□ -1.61
NDUFA4-202ENST00000463308 MBD1Q9UIS9 605 aaPredicted RBP5□□□□□ -1.61
NDUFA4-202ENST00000463308 BRPF3Q9ULD4 1205 aa5□□□□□ -1.61
NDUFA4-202ENST00000463308 TPX2Q9ULW0 747 aaKnown RBP5□□□□□ -1.61
NDUFA4-202ENST00000463308 N4BP3O15049 544 aa4.99□□□□□ -1.61
NDUFA4-202ENST00000463308 PRICKLE3O43900 615 aaPredicted RBP4.99□□□□□ -1.61
NDUFA4-202ENST00000463308 LRIG2O94898 1065 aa4.99□□□□□ -1.61
NDUFA4-202ENST00000463308 ESR1P03372 595 aa4.99□□□□□ -1.61
NDUFA4-202ENST00000463308 VMACQ2NL98 169 aa4.99□□□□□ -1.61
NDUFA4-202ENST00000463308 KIAA0319Q5VV43 1072 aa4.99□□□□□ -1.61
NDUFA4-202ENST00000463308 ZNF746Q6NUN9 644 aaPredicted RBP4.99□□□□□ -1.61
NDUFA4-202ENST00000463308 COX4I2Q96KJ9 171 aa4.99□□□□□ -1.61
NDUFA4-202ENST00000463308 SCAND2PQ9GZW5 306 aaPredicted RBP4.99□□□□□ -1.61
NDUFA4-202ENST00000463308 POLR3DP05423 398 aaPredicted RBP4.98□□□□□ -1.61
NDUFA4-202ENST00000463308 SSFA2P28290 1259 aa4.98□□□□□ -1.61
NDUFA4-202ENST00000463308 GLYCTKQ8IVS8 523 aa4.98□□□□□ -1.61
NDUFA4-202ENST00000463308 KCNB2Q92953 911 aa4.98□□□□□ -1.61
NDUFA4-202ENST00000463308 NECAB3Q96P71 396 aaPredicted RBP4.98□□□□□ -1.61
NDUFA4-202ENST00000463308 EPB41L4AQ9HCS5 686 aaPredicted RBP4.98□□□□□ -1.61
NDUFA4-202ENST00000463308 SIRT5Q9NXA8 310 aa4.98□□□□□ -1.61
NDUFA4-202ENST00000463308 OR14I1A6ND48 311 aa4.97□□□□□ -1.61
NDUFA4-202ENST00000463308 IRS4O14654 1257 aaPredicted RBP4.97□□□□□ -1.61
NDUFA4-202ENST00000463308 SLPIP03973 132 aa4.97□□□□□ -1.61
NDUFA4-202ENST00000463308 C6P13671 934 aa4.97□□□□□ -1.61
NDUFA4-202ENST00000463308 NPR3P17342 541 aa4.97□□□□□ -1.61
NDUFA4-202ENST00000463308 NTF4P34130 210 aa4.97□□□□□ -1.61
NDUFA4-202ENST00000463308 MTMR3Q13615 1198 aa4.97□□□□□ -1.61
NDUFA4-202ENST00000463308 UBXN11Q5T124 520 aa4.97□□□□□ -1.61
NDUFA4-202ENST00000463308 CNKSR3Q6P9H4 555 aa4.97□□□□□ -1.61
NDUFA4-202ENST00000463308 CDC37L1Q7L3B6 337 aa4.97□□□□□ -1.61
NDUFA4-202ENST00000463308 ARMCX6Q7L4S7 300 aa4.97□□□□□ -1.61
NDUFA4-202ENST00000463308 PDZD3Q86UT5 571 aa4.97□□□□□ -1.61
NDUFA4-202ENST00000463308 GJD3Q8N144 294 aa4.97□□□□□ -1.61
NDUFA4-202ENST00000463308 EHD4Q9H223 541 aa4.97□□□□□ -1.61
NDUFA4-202ENST00000463308 PPP4R2Q9NY27 417 aa4.97□□□□□ -1.61
NDUFA4-202ENST00000463308 TRAK1Q9UPV9 953 aa4.97□□□□□ -1.61
NDUFA4-202ENST00000463308 FANCGO15287 622 aa4.96□□□□□ -1.62
NDUFA4-202ENST00000463308 SLITRK5O94991 958 aa4.96□□□□□ -1.62
NDUFA4-202ENST00000463308 ZGLP1P0C6A0 271 aa4.96□□□□□ -1.62
NDUFA4-202ENST00000463308 KIR3DL1P43629 444 aa4.96□□□□□ -1.62
NDUFA4-202ENST00000463308 SRSF3P84103 164 aaKnown RBP4.96□□□□□ -1.62
NDUFA4-202ENST00000463308 PDE4CQ08493 712 aa4.96□□□□□ -1.62
NDUFA4-202ENST00000463308 SPPL2CQ8IUH8 684 aa4.96□□□□□ -1.62
NDUFA4-202ENST00000463308 TMC1Q8TDI8 760 aa4.96□□□□□ -1.62
NDUFA4-202ENST00000463308 PPP1R13LQ8WUF5 828 aa4.96□□□□□ -1.62
NDUFA4-202ENST00000463308 DHX38Q92620 1227 aaKnown RBP4.96□□□□□ -1.62
NDUFA4-202ENST00000463308 SMPD4Q9NXE4 827 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms