RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 PRDM1O75626 825 aa14.01□□□□□ -0.17
CPNE1-221ENST00000462352 GH2P01242 217 aa14.01□□□□□ -0.17
CPNE1-221ENST00000462352 PTPRAP18433 802 aa14.01□□□□□ -0.17
CPNE1-221ENST00000462352 RASA1P20936 1047 aa14.01□□□□□ -0.17
CPNE1-221ENST00000462352 PDE4BQ07343 736 aa14.01□□□□□ -0.17
CPNE1-221ENST00000462352 IMMTQ16891 758 aaKnown RBP14.01□□□□□ -0.17
CPNE1-221ENST00000462352 ABCB5Q2M3G0 1257 aa14.01□□□□□ -0.17
CPNE1-221ENST00000462352 ERO1BQ86YB8 467 aa14.01□□□□□ -0.17
CPNE1-221ENST00000462352 CCDC102AQ96A19 550 aa14.01□□□□□ -0.17
CPNE1-221ENST00000462352 OPTNQ96CV9 577 aa14.01□□□□□ -0.17
CPNE1-221ENST00000462352 OTUD5Q96G74 571 aa14.01□□□□□ -0.17
CPNE1-221ENST00000462352 WNK4Q96J92 1243 aa14.01□□□□□ -0.17
CPNE1-221ENST00000462352 CAPNS2Q96L46 248 aa14.01□□□□□ -0.17
CPNE1-221ENST00000462352 MKNK2Q9HBH9 465 aa14.01□□□□□ -0.17
CPNE1-221ENST00000462352 ZNF287Q9HBT7 754 aa14.01□□□□□ -0.17
CPNE1-221ENST00000462352 PICK1Q9NRD5 415 aa14.01□□□□□ -0.17
CPNE1-221ENST00000462352 GINM1Q9NU53 330 aa14.01□□□□□ -0.17
CPNE1-221ENST00000462352 ZBTB21Q9ULJ3 1066 aa14.01□□□□□ -0.17
CPNE1-221ENST00000462352 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.01□□□□□ -0.17
CPNE1-221ENST00000462352 RBM8AQ9Y5S9 174 aaKnown RBP14.01□□□□□ -0.17
CPNE1-221ENST00000462352 TACC3Q9Y6A5 838 aa14.01□□□□□ -0.17
CPNE1-221ENST00000462352 DOCK1Q14185 1865 aa14.01□□□□□ -0.17
CPNE1-221ENST00000462352 MPHOSPH10O00566 681 aaKnown RBP14□□□□□ -0.17
CPNE1-221ENST00000462352 ASNSP08243 561 aa14□□□□□ -0.17
CPNE1-221ENST00000462352 CYP21A2P08686 494 aa14□□□□□ -0.17
CPNE1-221ENST00000462352 FGRP09769 529 aa14□□□□□ -0.17
CPNE1-221ENST00000462352 AKR1B1P15121 316 aa14□□□□□ -0.17
CPNE1-221ENST00000462352 GJA5P36382 358 aa14□□□□□ -0.17
CPNE1-221ENST00000462352 ECE1P42892 770 aa14□□□□□ -0.17
CPNE1-221ENST00000462352 VEGFBP49765 207 aa14□□□□□ -0.17
CPNE1-221ENST00000462352 PPATQ06203 517 aa14□□□□□ -0.17
CPNE1-221ENST00000462352 SPRYD7Q5W111 196 aa14□□□□□ -0.17
CPNE1-221ENST00000462352 CCDC84Q86UT8 332 aaPredicted RBP14□□□□□ -0.17
CPNE1-221ENST00000462352 TBC1D10CQ8IV04 446 aa14□□□□□ -0.17
CPNE1-221ENST00000462352 CCDC17Q96LX7 622 aa14□□□□□ -0.17
CPNE1-221ENST00000462352 CABP5Q9NP86 173 aa14□□□□□ -0.17
CPNE1-221ENST00000462352 INCENPQ9NQS7 918 aa14□□□□□ -0.17
CPNE1-221ENST00000462352 LAMA4Q16363 1823 aa13.99□□□□□ -0.17
CPNE1-221ENST00000462352 WDR33Q9C0J8 1336 aaKnown RBP13.99□□□□□ -0.17
CPNE1-221ENST00000462352 ORC4O43929 436 aa13.99□□□□□ -0.17
CPNE1-221ENST00000462352 ZBTB48P10074 688 aaPredicted RBP13.99□□□□□ -0.17
CPNE1-221ENST00000462352 GUCY1A2P33402 732 aa13.99□□□□□ -0.17
CPNE1-221ENST00000462352 MKRN3Q13064 507 aaKnown RBP13.99□□□□□ -0.17
CPNE1-221ENST00000462352 PPIL2Q13356 520 aa13.99□□□□□ -0.17
CPNE1-221ENST00000462352 AKNAD1Q5T1N1 836 aa13.99□□□□□ -0.17
CPNE1-221ENST00000462352 ZNF444Q8N0Y2 327 aaPredicted RBP13.99□□□□□ -0.17
CPNE1-221ENST00000462352 STAG1Q8WVM7 1258 aa13.99□□□□□ -0.17
CPNE1-221ENST00000462352 ZHX2Q9Y6X8 837 aa13.99□□□□□ -0.17
CPNE1-221ENST00000462352 ATAD5Q96QE3 1844 aa13.99□□□□□ -0.17
CPNE1-221ENST00000462352 MYH8P13535 1937 aa13.98□□□□□ -0.17
CPNE1-221ENST00000462352 USP17L5A8MUK1 530 aa13.98□□□□□ -0.17
CPNE1-221ENST00000462352 IRF6O14896 467 aa13.98□□□□□ -0.17
CPNE1-221ENST00000462352 AOC2O75106 756 aa13.98□□□□□ -0.17
CPNE1-221ENST00000462352 REC8O95072 547 aa13.98□□□□□ -0.17
CPNE1-221ENST00000462352 NOGQ13253 232 aa13.98□□□□□ -0.17
CPNE1-221ENST00000462352 SEPT2Q15019 361 aa13.98□□□□□ -0.17
CPNE1-221ENST00000462352 RAB3GAP1Q15042 981 aa13.98□□□□□ -0.17
CPNE1-221ENST00000462352 MFSD6Q6ZSS7 791 aa13.98□□□□□ -0.17
CPNE1-221ENST00000462352 TMEM179Q6ZVK1 233 aa13.98□□□□□ -0.17
CPNE1-221ENST00000462352 DNAJC5GQ8N7S2 189 aa13.98□□□□□ -0.17
CPNE1-221ENST00000462352 RNF41Q9H4P4 317 aaPredicted RBP13.98□□□□□ -0.17
CPNE1-221ENST00000462352 TOMM22Q9NS69 142 aa13.98□□□□□ -0.17
CPNE1-221ENST00000462352 NEDD4P46934 1319 aa13.97□□□□□ -0.17
CPNE1-221ENST00000462352 PCP11498 1178 aaKnown RBP13.97□□□□□ -0.17
CPNE1-221ENST00000462352 NECTIN1Q15223 517 aa13.97□□□□□ -0.17
CPNE1-221ENST00000462352 FAM47AQ5JRC9 791 aa13.97□□□□□ -0.17
CPNE1-221ENST00000462352 RRP12Q5JTH9 1297 aaKnown RBP13.97□□□□□ -0.17
CPNE1-221ENST00000462352 ZIC5Q96T25 663 aa13.97□□□□□ -0.17
CPNE1-221ENST00000462352 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.97□□□□□ -0.17
CPNE1-221ENST00000462352 AS3MTQ9HBK9 375 aa13.97□□□□□ -0.17
CPNE1-221ENST00000462352 KCNH4Q9UQ05 1017 aa13.97□□□□□ -0.17
CPNE1-221ENST00000462352 AFG3L2Q9Y4W6 797 aa13.97□□□□□ -0.17
CPNE1-221ENST00000462352 TAF6LQ9Y6J9 622 aa13.97□□□□□ -0.17
CPNE1-221ENST00000462352 TSPY2A6NKD2 308 aa13.96□□□□□ -0.17
CPNE1-221ENST00000462352 SLC27A2O14975 620 aa13.96□□□□□ -0.17
CPNE1-221ENST00000462352 RANBP6O60518 1105 aaKnown RBP13.96□□□□□ -0.17
CPNE1-221ENST00000462352 TSPY3P0CV98 308 aa13.96□□□□□ -0.17
CPNE1-221ENST00000462352 TSPY8P0CW00 308 aa13.96□□□□□ -0.17
CPNE1-221ENST00000462352 TFAP4Q01664 338 aa13.96□□□□□ -0.17
CPNE1-221ENST00000462352 KIF23Q02241 960 aaPredicted RBP13.96□□□□□ -0.17
CPNE1-221ENST00000462352 SPP2Q13103 211 aa13.96□□□□□ -0.17
CPNE1-221ENST00000462352 C8orf34Q49A92 452 aa13.96□□□□□ -0.17
CPNE1-221ENST00000462352 CREB3L3Q68CJ9 461 aa13.96□□□□□ -0.17
CPNE1-221ENST00000462352 ZNF280CQ8ND82 737 aa13.96□□□□□ -0.17
CPNE1-221ENST00000462352 NEDD1Q8NHV4 660 aa13.96□□□□□ -0.17
CPNE1-221ENST00000462352 NKX2-3Q8TAU0 364 aa13.96□□□□□ -0.17
CPNE1-221ENST00000462352 WDR18Q9BV38 432 aa13.96□□□□□ -0.17
CPNE1-221ENST00000462352 TBC1D2Q9BYX2 928 aa13.96□□□□□ -0.17
CPNE1-221ENST00000462352 PLIN4Q96Q06 1357 aa13.96□□□□□ -0.18
CPNE1-221ENST00000462352 PHIPQ8WWQ0 1821 aa13.95□□□□□ -0.18
CPNE1-221ENST00000462352 IGKV6D-41A0A0C4DH26 115 aa13.95□□□□□ -0.18
CPNE1-221ENST00000462352 TRIM75PA6NK02 468 aa13.95□□□□□ -0.18
CPNE1-221ENST00000462352 CXCL11O14625 94 aa13.95□□□□□ -0.18
CPNE1-221ENST00000462352 EPB41L2O43491 1005 aaKnown RBP13.95□□□□□ -0.18
CPNE1-221ENST00000462352 MAP2K2P36507 400 aa13.95□□□□□ -0.18
CPNE1-221ENST00000462352 GTF2A2P52657 109 aa13.95□□□□□ -0.18
CPNE1-221ENST00000462352 ICA1Q05084 483 aa13.95□□□□□ -0.18
CPNE1-221ENST00000462352 SNAPC2Q13487 334 aa13.95□□□□□ -0.18
CPNE1-221ENST00000462352 STOX1Q6ZVD7 989 aa13.95□□□□□ -0.18
CPNE1-221ENST00000462352 CLEC10AQ8IUN9 316 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms