RNA–Protein interactions for RNA: ENST00000462212.5

ITSN1-222, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-222	ENST00000462212	ABHD8	Q96I13	439 aa		10.06	□□□□□ -0.8
ITSN1-222	ENST00000462212	WDR18	Q9BV38	432 aa		10.06	□□□□□ -0.8
ITSN1-222	ENST00000462212	ATP8A2	Q9NTI2	1148 aa		10.06	□□□□□ -0.8
ITSN1-222	ENST00000462212	MCM9	Q9NXL9	1143 aa		10.06	□□□□□ -0.8
ITSN1-222	ENST00000462212	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.06	□□□□□ -0.8
ITSN1-222	ENST00000462212	ZBTB21	Q9ULJ3	1066 aa		10.06	□□□□□ -0.8
ITSN1-222	ENST00000462212	SLC45A1	Q9Y2W3	748 aa		10.06	□□□□□ -0.8
ITSN1-222	ENST00000462212	LOC285556	D6RIA3	1793 aa		10.06	□□□□□ -0.8
ITSN1-222	ENST00000462212	BAZ2A	Q9UIF9	1905 aa	Known RBP	10.05	□□□□□ -0.8
ITSN1-222	ENST00000462212	TRIM75P	A6NK02	468 aa		10.05	□□□□□ -0.8
ITSN1-222	ENST00000462212	PDHX	O00330	501 aa		10.05	□□□□□ -0.8
ITSN1-222	ENST00000462212	GDF11	O95390	407 aa		10.05	□□□□□ -0.8
ITSN1-222	ENST00000462212	POLR3D	P05423	398 aa	Predicted RBP	10.05	□□□□□ -0.8
ITSN1-222	ENST00000462212	SHMT1	P34896	483 aa		10.05	□□□□□ -0.8
ITSN1-222	ENST00000462212	SP3	Q02447	781 aa		10.05	□□□□□ -0.8
ITSN1-222	ENST00000462212	EVX2	Q03828	476 aa		10.05	□□□□□ -0.8
ITSN1-222	ENST00000462212	SPP2	Q13103	211 aa		10.05	□□□□□ -0.8
ITSN1-222	ENST00000462212	PKN2	Q16513	984 aa	Known RBP	10.05	□□□□□ -0.8
ITSN1-222	ENST00000462212	SHROOM1	Q2M3G4	852 aa	Predicted RBP	10.05	□□□□□ -0.8
ITSN1-222	ENST00000462212	LRRFIP1	Q32MZ4	808 aa	Known RBP	10.05	□□□□□ -0.8
ITSN1-222	ENST00000462212	SH3D19	Q5HYK7	790 aa		10.05	□□□□□ -0.8
ITSN1-222	ENST00000462212	CHD1L	Q86WJ1	897 aa		10.05	□□□□□ -0.8
ITSN1-222	ENST00000462212	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.05	□□□□□ -0.8
ITSN1-222	ENST00000462212	STRBP	Q96SI9	672 aa	Known RBP	10.05	□□□□□ -0.8
ITSN1-222	ENST00000462212	TRIM34	Q9BYJ4	488 aa		10.05	□□□□□ -0.8
ITSN1-222	ENST00000462212	LNPK	Q9C0E8	428 aa		10.05	□□□□□ -0.8
ITSN1-222	ENST00000462212	CYP2D6	P10635	497 aa		10.04	□□□□□ -0.8
ITSN1-222	ENST00000462212	BACE1	P56817	501 aa		10.04	□□□□□ -0.8
ITSN1-222	ENST00000462212	CAP1	Q01518	475 aa		10.04	□□□□□ -0.8
ITSN1-222	ENST00000462212	ZMYM1	Q5SVZ6	1142 aa		10.04	□□□□□ -0.8
ITSN1-222	ENST00000462212	C12orf60	Q5U649	245 aa		10.04	□□□□□ -0.8
ITSN1-222	ENST00000462212	GIMAP6	Q6P9H5	292 aa		10.04	□□□□□ -0.8
ITSN1-222	ENST00000462212	C17orf99	Q6UX52	265 aa		10.04	□□□□□ -0.8
ITSN1-222	ENST00000462212	TICAM2	Q86XR7	235 aa		10.04	□□□□□ -0.8
ITSN1-222	ENST00000462212	ERO1A	Q96HE7	468 aa		10.04	□□□□□ -0.8
ITSN1-222	ENST00000462212	PARK7	Q99497	189 aa	Known RBP	10.04	□□□□□ -0.8
ITSN1-222	ENST00000462212	OSBPL3	Q9H4L5	887 aa		10.04	□□□□□ -0.8
ITSN1-222	ENST00000462212	AS3MT	Q9HBK9	375 aa		10.04	□□□□□ -0.8
ITSN1-222	ENST00000462212	PCDH10	Q9P2E7	1040 aa		10.04	□□□□□ -0.8
ITSN1-222	ENST00000462212	AGTPBP1	Q9UPW5	1226 aa		10.04	□□□□□ -0.8
ITSN1-222	ENST00000462212	SLC4A4	Q9Y6R1	1079 aa		10.04	□□□□□ -0.8
ITSN1-222	ENST00000462212	GSG1L2	A8MUP6	293 aa		10.03	□□□□□ -0.8
ITSN1-222	ENST00000462212	USP17L12	C9JPN9	530 aa		10.03	□□□□□ -0.8
ITSN1-222	ENST00000462212	USP17L21	D6R901	530 aa		10.03	□□□□□ -0.8
ITSN1-222	ENST00000462212		M0R2C6	588 aa		10.03	□□□□□ -0.8
ITSN1-222	ENST00000462212	GPAA1	O43292	621 aa		10.03	□□□□□ -0.8
ITSN1-222	ENST00000462212	GH2	P01242	217 aa		10.03	□□□□□ -0.8
ITSN1-222	ENST00000462212	BCR	P11274	1271 aa		10.03	□□□□□ -0.8
ITSN1-222	ENST00000462212	HMGCS2	P54868	508 aa		10.03	□□□□□ -0.8
ITSN1-222	ENST00000462212	IRX6	P78412	446 aa	Predicted RBP	10.03	□□□□□ -0.8
ITSN1-222	ENST00000462212	CERKL	Q49MI3	558 aa	Predicted RBP	10.03	□□□□□ -0.8
ITSN1-222	ENST00000462212	TREML2	Q5T2D2	321 aa		10.03	□□□□□ -0.8
ITSN1-222	ENST00000462212	B4GALNT3	Q6L9W6	998 aa		10.03	□□□□□ -0.8
ITSN1-222	ENST00000462212	FBXO46	Q6PJ61	603 aa	Predicted RBP	10.03	□□□□□ -0.8
ITSN1-222	ENST00000462212	GADL1	Q6ZQY3	521 aa		10.03	□□□□□ -0.8
ITSN1-222	ENST00000462212	OTOP1	Q7RTM1	612 aa		10.03	□□□□□ -0.8
ITSN1-222	ENST00000462212	PLEKHM2	Q8IWE5	1019 aa		10.03	□□□□□ -0.8
ITSN1-222	ENST00000462212	CD99L2	Q8TCZ2	262 aa		10.03	□□□□□ -0.8
ITSN1-222	ENST00000462212	EVI5L	Q96CN4	794 aa		10.03	□□□□□ -0.8
ITSN1-222	ENST00000462212	FSD1	Q9BTV5	496 aa		10.03	□□□□□ -0.8
ITSN1-222	ENST00000462212	SWAP70	Q9UH65	585 aa		10.03	□□□□□ -0.8
ITSN1-222	ENST00000462212	CYP2D7	A0A087X1C5	515 aa		10.02	□□□□□ -0.81
ITSN1-222	ENST00000462212	C19orf81	C9J6K1	198 aa		10.02	□□□□□ -0.81
ITSN1-222	ENST00000462212	USP17L10	C9JJH3	530 aa		10.02	□□□□□ -0.81
ITSN1-222	ENST00000462212	SMIM22	K7EJ46	135 aa		10.02	□□□□□ -0.81
ITSN1-222	ENST00000462212	CYP2C8	P10632	490 aa		10.02	□□□□□ -0.81
ITSN1-222	ENST00000462212	GNAT2	P19087	354 aa		10.02	□□□□□ -0.81
ITSN1-222	ENST00000462212	GUCY1A2	P33402	732 aa		10.02	□□□□□ -0.81
ITSN1-222	ENST00000462212	LACTB	P83111	547 aa	Predicted RBP	10.02	□□□□□ -0.81
ITSN1-222	ENST00000462212	MTMR2	Q13614	643 aa		10.02	□□□□□ -0.81
ITSN1-222	ENST00000462212	ABCB5	Q2M3G0	1257 aa		10.02	□□□□□ -0.81
ITSN1-222	ENST00000462212	SBK1	Q52WX2	424 aa		10.02	□□□□□ -0.81
ITSN1-222	ENST00000462212	CTR9	Q6PD62	1173 aa		10.02	□□□□□ -0.81
ITSN1-222	ENST00000462212	C16orf86	Q6ZW13	317 aa		10.02	□□□□□ -0.81
ITSN1-222	ENST00000462212	SLC44A5	Q8NCS7	719 aa		10.02	□□□□□ -0.81
ITSN1-222	ENST00000462212	DYNLL2	Q96FJ2	89 aa		10.02	□□□□□ -0.81
ITSN1-222	ENST00000462212	DDRGK1	Q96HY6	314 aa		10.02	□□□□□ -0.81
ITSN1-222	ENST00000462212	SEC62	Q99442	399 aa	Known RBP	10.02	□□□□□ -0.81
ITSN1-222	ENST00000462212	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	10.02	□□□□□ -0.81
ITSN1-222	ENST00000462212	ARPP21	Q9UBL0	812 aa	Predicted RBP	10.02	□□□□□ -0.81
ITSN1-222	ENST00000462212	MYH8	P13535	1937 aa		10.01	□□□□□ -0.81
ITSN1-222	ENST00000462212	ROBO3	Q96MS0	1386 aa		10.01	□□□□□ -0.81
ITSN1-222	ENST00000462212	HOXA7	P31268	230 aa	Predicted RBP	10.01	□□□□□ -0.81
ITSN1-222	ENST00000462212	CDK8	P49336	464 aa		10.01	□□□□□ -0.81
ITSN1-222	ENST00000462212	AMOTL1	Q8IY63	956 aa		10.01	□□□□□ -0.81
ITSN1-222	ENST00000462212	C12orf42	Q96LP6	360 aa		10.01	□□□□□ -0.81
ITSN1-222	ENST00000462212	EFCC1	Q9HA90	598 aa		10.01	□□□□□ -0.81
ITSN1-222	ENST00000462212	CABP5	Q9NP86	173 aa		10.01	□□□□□ -0.81
ITSN1-222	ENST00000462212	CPA4	Q9UI42	421 aa		10.01	□□□□□ -0.81
ITSN1-222	ENST00000462212	PNMA3	Q9UL41	463 aa		10.01	□□□□□ -0.81
ITSN1-222	ENST00000462212	HPS5	Q9UPZ3	1129 aa		10.01	□□□□□ -0.81
ITSN1-222	ENST00000462212	TRIM17	Q9Y577	477 aa		10.01	□□□□□ -0.81
ITSN1-222	ENST00000462212	ZSWIM8	A7E2V4	1837 aa		10	□□□□□ -0.81
ITSN1-222	ENST00000462212	PATL2	C9JE40	543 aa	Known RBP	10	□□□□□ -0.81
ITSN1-222	ENST00000462212	FOXP2	O15409	715 aa		10	□□□□□ -0.81
ITSN1-222	ENST00000462212	GNRH1	P01148	92 aa		10	□□□□□ -0.81
ITSN1-222	ENST00000462212	CTGF	P29279	349 aa		10	□□□□□ -0.81
ITSN1-222	ENST00000462212	PABPC4	Q13310	644 aa	Known RBP eCLIP	10	□□□□□ -0.81
ITSN1-222	ENST00000462212	SEPT2	Q15019	361 aa		10	□□□□□ -0.81
ITSN1-222	ENST00000462212	RAB3GAP1	Q15042	981 aa		10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms