RNA–Protein interactions for RNA: ENST00000461934.5

UBA3-205, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,224 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-205ENST00000461934 TTF1Q15361 905 aaPredicted RBP16.11■□□□□ 0.17
UBA3-205ENST00000461934 MTFR1Q15390 333 aa16.11■□□□□ 0.17
UBA3-205ENST00000461934 CLASRPQ8N2M8 674 aaKnown RBP16.11■□□□□ 0.17
UBA3-205ENST00000461934 IL1RAPL2Q9NP60 686 aa16.11■□□□□ 0.17
UBA3-205ENST00000461934 DDX19BQ9UMR2 479 aa16.11■□□□□ 0.17
UBA3-205ENST00000461934 GABRQQ9UN88 632 aa16.11■□□□□ 0.17
UBA3-205ENST00000461934 DDX60LQ5H9U9 1706 aaKnown RBP16.11■□□□□ 0.17
UBA3-205ENST00000461934 GDF11O95390 407 aa16.1■□□□□ 0.17
UBA3-205ENST00000461934 CCL5P13501 91 aa16.1■□□□□ 0.17
UBA3-205ENST00000461934 FLT3LGP49771 235 aa16.1■□□□□ 0.17
UBA3-205ENST00000461934 MTMR2Q13614 643 aa16.1■□□□□ 0.17
UBA3-205ENST00000461934 FAM110CQ1W6H9 321 aa16.1■□□□□ 0.17
UBA3-205ENST00000461934 TMED8Q6PL24 325 aaPredicted RBP16.1■□□□□ 0.17
UBA3-205ENST00000461934 MIGA1Q8NAN2 632 aa16.1■□□□□ 0.17
UBA3-205ENST00000461934 GINM1Q9NU53 330 aa16.1■□□□□ 0.17
UBA3-205ENST00000461934 C19orf81C9J6K1 198 aa16.09■□□□□ 0.17
UBA3-205ENST00000461934 IFIT2P09913 472 aaKnown RBP16.09■□□□□ 0.17
UBA3-205ENST00000461934 SH3D19Q5HYK7 790 aa16.09■□□□□ 0.17
UBA3-205ENST00000461934 RPAP2Q8IXW5 612 aaPredicted RBP16.09■□□□□ 0.17
UBA3-205ENST00000461934 RHPN1Q8TCX5 695 aa16.09■□□□□ 0.17
UBA3-205ENST00000461934 KIF1BPQ96EK5 621 aa16.09■□□□□ 0.17
UBA3-205ENST00000461934 WDR18Q9BV38 432 aa16.09■□□□□ 0.17
UBA3-205ENST00000461934 COG6Q9Y2V7 657 aa16.09■□□□□ 0.17
UBA3-205ENST00000461934 NDUFB9Q9Y6M9 179 aa16.09■□□□□ 0.17
UBA3-205ENST00000461934 USP17L10C9JJH3 530 aa16.08■□□□□ 0.16
UBA3-205ENST00000461934 GJB1P08034 283 aa16.08■□□□□ 0.16
UBA3-205ENST00000461934 BACE1P56817 501 aa16.08■□□□□ 0.16
UBA3-205ENST00000461934 RRP1BQ14684 758 aaKnown RBP16.08■□□□□ 0.16
UBA3-205ENST00000461934 TTC6Q86TZ1 520 aa16.08■□□□□ 0.16
UBA3-205ENST00000461934 CCAR1Q8IX12 1150 aaKnown RBP16.08■□□□□ 0.16
UBA3-205ENST00000461934 PXYLP1Q8TE99 480 aa16.08■□□□□ 0.16
UBA3-205ENST00000461934 DPF3Q92784 378 aa16.08■□□□□ 0.16
UBA3-205ENST00000461934 FEZ1Q99689 392 aa16.08■□□□□ 0.16
UBA3-205ENST00000461934 ASCC2Q9H1I8 757 aaPredicted RBP16.08■□□□□ 0.16
UBA3-205ENST00000461934 MAGEB6P1A0A0J9YX57 407 aa16.07■□□□□ 0.16
UBA3-205ENST00000461934 GJA8P48165 433 aa16.07■□□□□ 0.16
UBA3-205ENST00000461934 IRF5Q13568 498 aa16.07■□□□□ 0.16
UBA3-205ENST00000461934 HTATIP2Q9BUP3 242 aa16.07■□□□□ 0.16
UBA3-205ENST00000461934 ANTXR1Q9H6X2 564 aa16.07■□□□□ 0.16
UBA3-205ENST00000461934 ZBTB21Q9ULJ3 1066 aa16.07■□□□□ 0.16
UBA3-205ENST00000461934 FRMPD3Q5JV73 1810 aa16.07■□□□□ 0.16
UBA3-205ENST00000461934 ALPK3Q96L96 1907 aa16.06■□□□□ 0.16
UBA3-205ENST00000461934 INHAP05111 366 aa16.06■□□□□ 0.16
UBA3-205ENST00000461934 POLR3DP05423 398 aaPredicted RBP16.06■□□□□ 0.16
UBA3-205ENST00000461934 ELNP15502 786 aa16.06■□□□□ 0.16
UBA3-205ENST00000461934 DNAJC2Q99543 621 aaKnown RBP16.06■□□□□ 0.16
UBA3-205ENST00000461934 UNC93B1Q9H1C4 597 aa16.06■□□□□ 0.16
UBA3-205ENST00000461934 DNAJC18Q9H819 358 aa16.06■□□□□ 0.16
UBA3-205ENST00000461934 CWC22Q9HCG8 908 aaKnown RBP16.06■□□□□ 0.16
UBA3-205ENST00000461934 CABP5Q9NP86 173 aa16.06■□□□□ 0.16
UBA3-205ENST00000461934 SERPINB13Q9UIV8 391 aa16.06■□□□□ 0.16
UBA3-205ENST00000461934 RCAN3Q9UKA8 241 aa16.06■□□□□ 0.16
UBA3-205ENST00000461934 ZNFX1Q9P2E3 1918 aaKnown RBP16.06■□□□□ 0.16
UBA3-205ENST00000461934 RAB11FIP3O75154 756 aa16.05■□□□□ 0.16
UBA3-205ENST00000461934 TFRCP02786 760 aaKnown RBP16.05■□□□□ 0.16
UBA3-205ENST00000461934 SLC9C2Q5TAH2 1124 aa16.05■□□□□ 0.16
UBA3-205ENST00000461934 USP17L2Q6R6M4 530 aa16.05■□□□□ 0.16
UBA3-205ENST00000461934 METTL16Q86W50 562 aaKnown RBP16.05■□□□□ 0.16
UBA3-205ENST00000461934 CRNKL1Q9BZJ0 848 aaKnown RBP16.05■□□□□ 0.16
UBA3-205ENST00000461934 BRCA2P51587 3418 aa16.04■□□□□ 0.16
UBA3-205ENST00000461934 MKI67P46013 3256 aaKnown RBP16.04■□□□□ 0.16
UBA3-205ENST00000461934 COL11A1P12107 1806 aaPredicted RBP16.04■□□□□ 0.16
UBA3-205ENST00000461934 GOLIM4O00461 696 aa16.04■□□□□ 0.16
UBA3-205ENST00000461934 GH2P01242 217 aa16.04■□□□□ 0.16
UBA3-205ENST00000461934 RAB3GAP1Q15042 981 aa16.04■□□□□ 0.16
UBA3-205ENST00000461934 ZYXQ15942 572 aaKnown RBP16.04■□□□□ 0.16
UBA3-205ENST00000461934 CERKLQ49MI3 558 aaPredicted RBP16.04■□□□□ 0.16
UBA3-205ENST00000461934 U2AF1L4Q8WU68 220 aaKnown RBP16.04■□□□□ 0.16
UBA3-205ENST00000461934 GTF3C2Q8WUA4 911 aaPredicted RBP16.04■□□□□ 0.16
UBA3-205ENST00000461934 SHISA4Q96DD7 197 aa16.04■□□□□ 0.16
UBA3-205ENST00000461934 EHD4Q9H223 541 aa16.04■□□□□ 0.16
UBA3-205ENST00000461934 FARP2O94887 1054 aaPredicted RBP16.03■□□□□ 0.16
UBA3-205ENST00000461934 SGPL1O95470 568 aa16.03■□□□□ 0.16
UBA3-205ENST00000461934 CAPN2P17655 700 aa16.03■□□□□ 0.16
UBA3-205ENST00000461934 HOXA7P31268 230 aaPredicted RBP16.03■□□□□ 0.16
UBA3-205ENST00000461934 HERVK_113P62684 666 aa16.03■□□□□ 0.16
UBA3-205ENST00000461934 PDE3AQ14432 1141 aa16.03■□□□□ 0.16
UBA3-205ENST00000461934 ABCB5Q2M3G0 1257 aa16.03■□□□□ 0.16
UBA3-205ENST00000461934 HABP4Q5JVS0 413 aaKnown RBP16.03■□□□□ 0.16
UBA3-205ENST00000461934 GPRC5AQ8NFJ5 357 aa16.03■□□□□ 0.16
UBA3-205ENST00000461934 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.03■□□□□ 0.16
UBA3-205ENST00000461934 ZBTB40Q9NUA8 1239 aa16.03■□□□□ 0.16
UBA3-205ENST00000461934 MYH4Q9Y623 1939 aa16.03■□□□□ 0.16
UBA3-205ENST00000461934 PARP14Q460N5 1801 aa16.03■□□□□ 0.16
UBA3-205ENST00000461934 HMGCRP04035 888 aa16.02■□□□□ 0.16
UBA3-205ENST00000461934 PDE6AP16499 860 aa16.02■□□□□ 0.16
UBA3-205ENST00000461934 USP14P54578 494 aa16.02■□□□□ 0.16
UBA3-205ENST00000461934 SHROOM1Q2M3G4 852 aaPredicted RBP16.02■□□□□ 0.16
UBA3-205ENST00000461934 DEFB118Q96PH6 123 aa16.02■□□□□ 0.16
UBA3-205ENST00000461934 P2RX7Q99572 595 aaKnown RBP16.02■□□□□ 0.16
UBA3-205ENST00000461934 NUDT12Q9BQG2 462 aa16.02■□□□□ 0.16
UBA3-205ENST00000461934 PAGR1Q9BTK6 254 aa16.02■□□□□ 0.16
UBA3-205ENST00000461934 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.02■□□□□ 0.16
UBA3-205ENST00000461934 MCM9Q9NXL9 1143 aa16.02■□□□□ 0.16
UBA3-205ENST00000461934 PCDH10Q9P2E7 1040 aa16.02■□□□□ 0.16
UBA3-205ENST00000461934 MORF4L1Q9UBU8 362 aa16.02■□□□□ 0.16
UBA3-205ENST00000461934 ZNF532Q9HCE3 1301 aa16.01■□□□□ 0.15
UBA3-205ENST00000461934 MPHOSPH10O00566 681 aaKnown RBP16.01■□□□□ 0.15
UBA3-205ENST00000461934 JAG1P78504 1218 aa16.01■□□□□ 0.15
UBA3-205ENST00000461934 TATDN1Q6P1N9 297 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms