RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 TMEM253P0C7T8 217 aa6.1□□□□□ -1.43
CLK1-206ENST00000461326 RNF214Q8ND24 703 aa6.1□□□□□ -1.43
CLK1-206ENST00000461326 KCNB2Q92953 911 aa6.1□□□□□ -1.43
CLK1-206ENST00000461326 FAM161BQ96MY7 647 aa6.1□□□□□ -1.43
CLK1-206ENST00000461326 KRTAP9-3Q9BYQ3 159 aa6.1□□□□□ -1.43
CLK1-206ENST00000461326 PPP4R2Q9NY27 417 aa6.1□□□□□ -1.43
CLK1-206ENST00000461326 PITPNM2Q9BZ72 1349 aa6.09□□□□□ -1.43
CLK1-206ENST00000461326 NPIPB6E9PJ23 425 aa6.09□□□□□ -1.43
CLK1-206ENST00000461326 GADD45BO75293 160 aaPredicted RBP6.09□□□□□ -1.43
CLK1-206ENST00000461326 INHBBP09529 407 aa6.09□□□□□ -1.43
CLK1-206ENST00000461326 ZNF76P36508 570 aa6.09□□□□□ -1.43
CLK1-206ENST00000461326 ST13P50502 369 aaKnown RBP6.09□□□□□ -1.43
CLK1-206ENST00000461326 CTSWP56202 376 aa6.09□□□□□ -1.43
CLK1-206ENST00000461326 ZC3H6P61129 1189 aaKnown RBP6.09□□□□□ -1.43
CLK1-206ENST00000461326 ERVK-24P63145 666 aa6.09□□□□□ -1.43
CLK1-206ENST00000461326 FAAP100Q0VG06 881 aa6.09□□□□□ -1.43
CLK1-206ENST00000461326 CIAPIN1Q6FI81 312 aa6.09□□□□□ -1.43
CLK1-206ENST00000461326 CCDC120Q96HB5 630 aa6.09□□□□□ -1.43
CLK1-206ENST00000461326 DIRC2Q96SL1 478 aa6.09□□□□□ -1.43
CLK1-206ENST00000461326 NSUN3Q9H649 340 aaKnown RBP6.09□□□□□ -1.43
CLK1-206ENST00000461326 PRDM10Q9NQV6 1147 aa6.09□□□□□ -1.43
CLK1-206ENST00000461326 GPN3Q9UHW5 284 aaPredicted RBP6.09□□□□□ -1.43
CLK1-206ENST00000461326 KRT1P04264 644 aa6.08□□□□□ -1.44
CLK1-206ENST00000461326 XRCC5P13010 732 aaKnown RBP6.08□□□□□ -1.44
CLK1-206ENST00000461326 GSTT1P30711 240 aa6.08□□□□□ -1.44
CLK1-206ENST00000461326 FANCCQ00597 558 aa6.08□□□□□ -1.44
CLK1-206ENST00000461326 KCNA10Q16322 511 aa6.08□□□□□ -1.44
CLK1-206ENST00000461326 NKPD1Q17RQ9 610 aa6.08□□□□□ -1.44
CLK1-206ENST00000461326 FAM214BQ7L5A3 538 aa6.08□□□□□ -1.44
CLK1-206ENST00000461326 EPS8L3Q8TE67 593 aaKnown RBP6.08□□□□□ -1.44
CLK1-206ENST00000461326 RNF34Q969K3 372 aa6.08□□□□□ -1.44
CLK1-206ENST00000461326 CARS2Q9HA77 564 aaKnown RBP6.08□□□□□ -1.44
CLK1-206ENST00000461326 TCAF2A6NFQ2 919 aa6.07□□□□□ -1.44
CLK1-206ENST00000461326 ERCC5P28715 1186 aaPredicted RBP6.07□□□□□ -1.44
CLK1-206ENST00000461326 GDNFP39905 211 aa6.07□□□□□ -1.44
CLK1-206ENST00000461326 HDLBPQ00341 1268 aaKnown RBP6.07□□□□□ -1.44
CLK1-206ENST00000461326 ZC3H12AQ5D1E8 599 aaKnown RBP6.07□□□□□ -1.44
CLK1-206ENST00000461326 LDLRAD1Q5T700 205 aa6.07□□□□□ -1.44
CLK1-206ENST00000461326 ANKRD24Q8TF21 1146 aa6.07□□□□□ -1.44
CLK1-206ENST00000461326 BCO2Q9BYV7 579 aa6.07□□□□□ -1.44
CLK1-206ENST00000461326 FOXQ1Q9C009 403 aa6.07□□□□□ -1.44
CLK1-206ENST00000461326 EPB41L4BQ9H329 900 aa6.07□□□□□ -1.44
CLK1-206ENST00000461326 TMEM39AQ9NV64 488 aa6.07□□□□□ -1.44
CLK1-206ENST00000461326 PPM1HQ9ULR3 514 aa6.07□□□□□ -1.44
CLK1-206ENST00000461326 GRM2Q14416 872 aa6.06□□□□□ -1.44
CLK1-206ENST00000461326 DTHD1Q6ZMT9 781 aa6.06□□□□□ -1.44
CLK1-206ENST00000461326 HS2ST1Q7LGA3 356 aa6.06□□□□□ -1.44
CLK1-206ENST00000461326 PDZD3Q86UT5 571 aa6.06□□□□□ -1.44
CLK1-206ENST00000461326 OSBPL7Q9BZF2 842 aa6.06□□□□□ -1.44
CLK1-206ENST00000461326 CD320Q9NPF0 282 aa6.06□□□□□ -1.44
CLK1-206ENST00000461326 PRDM5Q9NQX1 630 aaPredicted RBP6.06□□□□□ -1.44
CLK1-206ENST00000461326 RNF19AQ9NV58 838 aa6.06□□□□□ -1.44
CLK1-206ENST00000461326 MAPK8IP1Q9UQF2 711 aa6.06□□□□□ -1.44
CLK1-206ENST00000461326 CTSHP09668 335 aa6.05□□□□□ -1.44
CLK1-206ENST00000461326 USP17L7P0C7H9 530 aa6.05□□□□□ -1.44
CLK1-206ENST00000461326 TAF1CQ15572 869 aaPredicted RBP6.05□□□□□ -1.44
CLK1-206ENST00000461326 PI16Q6UXB8 463 aa6.05□□□□□ -1.44
CLK1-206ENST00000461326 ATG14Q6ZNE5 492 aa6.05□□□□□ -1.44
CLK1-206ENST00000461326 SULF2Q8IWU5 870 aa6.05□□□□□ -1.44
CLK1-206ENST00000461326 ACSBG1Q96GR2 724 aa6.05□□□□□ -1.44
CLK1-206ENST00000461326 EMILIN2Q9BXX0 1053 aa6.05□□□□□ -1.44
CLK1-206ENST00000461326 TGIF2Q9GZN2 237 aa6.05□□□□□ -1.44
CLK1-206ENST00000461326 DCP1AQ9NPI6 582 aaPredicted RBP6.05□□□□□ -1.44
CLK1-206ENST00000461326 PICK1Q9NRD5 415 aa6.05□□□□□ -1.44
CLK1-206ENST00000461326 USP31Q70CQ4 1352 aa6.05□□□□□ -1.44
CLK1-206ENST00000461326 MED14OSP0DP75 135 aa6.04□□□□□ -1.44
CLK1-206ENST00000461326 MAP1SQ66K74 1059 aaPredicted RBP6.04□□□□□ -1.44
CLK1-206ENST00000461326 NXPE4Q6UWF7 544 aa6.04□□□□□ -1.44
CLK1-206ENST00000461326 METTL16Q86W50 562 aaKnown RBP6.04□□□□□ -1.44
CLK1-206ENST00000461326 NT5DC4Q86YG4 428 aa6.04□□□□□ -1.44
CLK1-206ENST00000461326 C19orf73Q9NVV2 129 aa6.04□□□□□ -1.44
CLK1-206ENST00000461326 FAM155AB1AL88 458 aaPredicted RBP6.03□□□□□ -1.44
CLK1-206ENST00000461326 NUAK1O60285 661 aa6.03□□□□□ -1.44
CLK1-206ENST00000461326 RAC2P15153 192 aa6.03□□□□□ -1.44
CLK1-206ENST00000461326 GLDCP23378 1020 aa6.03□□□□□ -1.44
CLK1-206ENST00000461326 ARNTP27540 789 aa6.03□□□□□ -1.44
CLK1-206ENST00000461326 SF3A1Q15459 793 aaKnown RBP6.03□□□□□ -1.44
CLK1-206ENST00000461326 CDC37L1Q7L3B6 337 aa6.03□□□□□ -1.44
CLK1-206ENST00000461326 NOC4LQ9BVI4 516 aaKnown RBP6.03□□□□□ -1.44
CLK1-206ENST00000461326 CCSER2Q9H7U1 834 aa6.03□□□□□ -1.44
CLK1-206ENST00000461326 ATP13A1Q9HD20 1204 aa6.03□□□□□ -1.44
CLK1-206ENST00000461326 EOMESO95936 686 aa6.02□□□□□ -1.45
CLK1-206ENST00000461326 RLBP1P12271 317 aa6.02□□□□□ -1.45
CLK1-206ENST00000461326 PWP1Q13610 501 aa6.02□□□□□ -1.45
CLK1-206ENST00000461326 GNL2Q13823 731 aaKnown RBP6.02□□□□□ -1.45
CLK1-206ENST00000461326 PPM1JQ5JR12 505 aa6.02□□□□□ -1.45
CLK1-206ENST00000461326 KCT2Q8NC54 265 aa6.02□□□□□ -1.45
CLK1-206ENST00000461326 C3orf58Q8NDZ4 430 aa6.02□□□□□ -1.45
CLK1-206ENST00000461326 GPBAR1Q8TDU6 330 aa6.02□□□□□ -1.45
CLK1-206ENST00000461326 SREK1Q8WXA9 508 aaKnown RBP6.02□□□□□ -1.45
CLK1-206ENST00000461326 HSPA12BQ96MM6 686 aa6.02□□□□□ -1.45
CLK1-206ENST00000461326 SLC26A8Q96RN1 970 aa6.02□□□□□ -1.45
CLK1-206ENST00000461326 SEMA3GQ9NS98 782 aa6.02□□□□□ -1.45
CLK1-206ENST00000461326 HOXA5P20719 270 aa6.01□□□□□ -1.45
CLK1-206ENST00000461326 NME2P22392 152 aa6.01□□□□□ -1.45
CLK1-206ENST00000461326 FCGRTP55899 365 aa6.01□□□□□ -1.45
CLK1-206ENST00000461326 RAD51AP2Q09MP3 1159 aa6.01□□□□□ -1.45
CLK1-206ENST00000461326 ABHD4Q8TB40 342 aa6.01□□□□□ -1.45
CLK1-206ENST00000461326 RELTQ969Z4 430 aa6.01□□□□□ -1.45
CLK1-206ENST00000461326 ALPK1Q96QP1 1244 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms