RNA–Protein interactions for RNA: ENST00000460677.5

PCYT1A-212, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-212ENST00000460677 NID2Q14112 1375 aa18.54■□□□□ 0.56
PCYT1A-212ENST00000460677 JAK2O60674 1132 aa18.54■□□□□ 0.56
PCYT1A-212ENST00000460677 TSPY3P0CV98 308 aa18.54■□□□□ 0.56
PCYT1A-212ENST00000460677 TSPY8P0CW00 308 aa18.54■□□□□ 0.56
PCYT1A-212ENST00000460677 PDCP20941 246 aa18.54■□□□□ 0.56
PCYT1A-212ENST00000460677 GMPSP49915 693 aaPredicted RBP18.54■□□□□ 0.56
PCYT1A-212ENST00000460677 HMGN5P82970 282 aaKnown RBP18.54■□□□□ 0.56
PCYT1A-212ENST00000460677 SPDYE2Q495Y8 402 aa18.54■□□□□ 0.56
PCYT1A-212ENST00000460677 MICU3Q86XE3 530 aa18.54■□□□□ 0.56
PCYT1A-212ENST00000460677 RAB11FIP4Q86YS3 637 aa18.54■□□□□ 0.56
PCYT1A-212ENST00000460677 ZNF654Q8IZM8 581 aa18.54■□□□□ 0.56
PCYT1A-212ENST00000460677 MYOZ2Q9NPC6 264 aa18.54■□□□□ 0.56
PCYT1A-212ENST00000460677 GJA3Q9Y6H8 435 aa18.54■□□□□ 0.56
PCYT1A-212ENST00000460677 ZNF541Q9H0D2 1346 aa18.53■□□□□ 0.56
PCYT1A-212ENST00000460677 COL2A1P02458 1487 aaPredicted RBP18.53■□□□□ 0.56
PCYT1A-212ENST00000460677 PTPDC1A2A3K4 754 aa18.53■□□□□ 0.56
PCYT1A-212ENST00000460677 GOLGA8AA7E2F4 631 aa18.53■□□□□ 0.56
PCYT1A-212ENST00000460677 NMT2O60551 498 aa18.53■□□□□ 0.56
PCYT1A-212ENST00000460677 DTNBO60941 627 aa18.53■□□□□ 0.56
PCYT1A-212ENST00000460677 YBX3P16989 372 aaKnown RBP eCLIP18.53■□□□□ 0.563e-8■□□□□ 10.5
PCYT1A-212ENST00000460677 SYT1P21579 422 aa18.53■□□□□ 0.56
PCYT1A-212ENST00000460677 FKBP1CQ5VVH2 108 aa18.53■□□□□ 0.56
PCYT1A-212ENST00000460677 SH3BP5LQ7L8J4 393 aa18.53■□□□□ 0.56
PCYT1A-212ENST00000460677 DGKHQ86XP1 1220 aa18.53■□□□□ 0.56
PCYT1A-212ENST00000460677 NEDD1Q8NHV4 660 aa18.53■□□□□ 0.56
PCYT1A-212ENST00000460677 MYL10Q9BUA6 226 aa18.53■□□□□ 0.56
PCYT1A-212ENST00000460677 IL17RBQ9NRM6 502 aa18.53■□□□□ 0.56
PCYT1A-212ENST00000460677 PI4KBQ9UBF8 816 aa18.53■□□□□ 0.56
PCYT1A-212ENST00000460677 WDR33Q9C0J8 1336 aaKnown RBP18.52■□□□□ 0.56
PCYT1A-212ENST00000460677 DICER1Q9UPY3 1922 aaKnown RBP18.52■□□□□ 0.56
PCYT1A-212ENST00000460677 ATRNL1Q5VV63 1379 aa18.52■□□□□ 0.56
PCYT1A-212ENST00000460677 CLRN2A0PK11 232 aa18.52■□□□□ 0.55
PCYT1A-212ENST00000460677 DDTLA6NHG4 134 aaPredicted RBP18.52■□□□□ 0.55
PCYT1A-212ENST00000460677 CPLX1O14810 134 aa18.52■□□□□ 0.55
PCYT1A-212ENST00000460677 STX6O43752 255 aa18.52■□□□□ 0.55
PCYT1A-212ENST00000460677 MYO1BO43795 1136 aa18.52■□□□□ 0.55
PCYT1A-212ENST00000460677 LARP1BQ659C4 914 aaKnown RBP18.52■□□□□ 0.55
PCYT1A-212ENST00000460677 CATIPQ7Z7H3 387 aa18.52■□□□□ 0.55
PCYT1A-212ENST00000460677 ZSCAN29Q8IWY8 852 aaPredicted RBP18.52■□□□□ 0.55
PCYT1A-212ENST00000460677 ANKS1AQ92625 1134 aa18.52■□□□□ 0.55
PCYT1A-212ENST00000460677 SHTN1A0MZ66 631 aa18.51■□□□□ 0.55
PCYT1A-212ENST00000460677 WNT10BO00744 389 aa18.51■□□□□ 0.55
PCYT1A-212ENST00000460677 RXRAP19793 462 aa18.51■□□□□ 0.55
PCYT1A-212ENST00000460677 PPP2R5BQ15173 497 aa18.51■□□□□ 0.55
PCYT1A-212ENST00000460677 NFKBIBQ15653 356 aa18.51■□□□□ 0.55
PCYT1A-212ENST00000460677 RCSD1Q6JBY9 416 aa18.51■□□□□ 0.55
PCYT1A-212ENST00000460677 CPLX2Q6PUV4 134 aaKnown RBP18.51■□□□□ 0.55
PCYT1A-212ENST00000460677 FOXP4Q8IVH2 680 aaPredicted RBP18.51■□□□□ 0.55
PCYT1A-212ENST00000460677 MICALL2Q8IY33 904 aa18.51■□□□□ 0.55
PCYT1A-212ENST00000460677 FAM184AQ8NB25 1140 aa18.51■□□□□ 0.55
PCYT1A-212ENST00000460677 DDX11Q96FC9 970 aa18.51■□□□□ 0.55
PCYT1A-212ENST00000460677 FAM217BQ9NTX9 383 aaPredicted RBP18.51■□□□□ 0.55
PCYT1A-212ENST00000460677 CNOT7Q9UIV1 285 aaKnown RBP18.51■□□□□ 0.55
PCYT1A-212ENST00000460677 KIF3AQ9Y496 699 aa18.51■□□□□ 0.55
PCYT1A-212ENST00000460677 PLIN4Q96Q06 1357 aa18.5■□□□□ 0.55
PCYT1A-212ENST00000460677 SBF1O95248 1867 aa18.5■□□□□ 0.55
PCYT1A-212ENST00000460677 TCP10L2B9ZVM9 353 aa18.5■□□□□ 0.55
PCYT1A-212ENST00000460677 CDKL5O76039 1030 aa18.5■□□□□ 0.55
PCYT1A-212ENST00000460677 DDAH1O94760 285 aa18.5■□□□□ 0.55
PCYT1A-212ENST00000460677 CALM1P0DP23 149 aa18.5■□□□□ 0.55
PCYT1A-212ENST00000460677 CALM2P0DP24 149 aa18.5■□□□□ 0.55
PCYT1A-212ENST00000460677 CALM3P0DP25 149 aa18.5■□□□□ 0.55
PCYT1A-212ENST00000460677 CDC27P30260 824 aa18.5■□□□□ 0.55
PCYT1A-212ENST00000460677 SHMT1P34896 483 aa18.5■□□□□ 0.55
PCYT1A-212ENST00000460677 ADD1P35611 737 aaKnown RBP18.5■□□□□ 0.55
PCYT1A-212ENST00000460677 RTN1Q16799 776 aa18.5■□□□□ 0.55
PCYT1A-212ENST00000460677 CLEC17AQ6ZS10 378 aa18.5■□□□□ 0.55
PCYT1A-212ENST00000460677 METTL16Q86W50 562 aaKnown RBP18.5■□□□□ 0.55
PCYT1A-212ENST00000460677 CCDC144CPQ8IYA2 1237 aa18.5■□□□□ 0.55
PCYT1A-212ENST00000460677 CRACR2BQ8N4Y2 399 aaPredicted RBP18.5■□□□□ 0.55
PCYT1A-212ENST00000460677 FANCBQ8NB91 859 aa18.5■□□□□ 0.55
PCYT1A-212ENST00000460677 FAM151AQ8WW52 585 aa18.5■□□□□ 0.55
PCYT1A-212ENST00000460677 CCDC196A0A1B0GTZ2 297 aa18.49■□□□□ 0.55
PCYT1A-212ENST00000460677 NBPF9Q3BBW0 867 aa18.49■□□□□ 0.55
PCYT1A-212ENST00000460677 GPC2Q8N158 579 aa18.49■□□□□ 0.55
PCYT1A-212ENST00000460677 NUP133Q8WUM0 1156 aa18.49■□□□□ 0.55
PCYT1A-212ENST00000460677 SIPA1L1O43166 1804 aa18.48■□□□□ 0.55
PCYT1A-212ENST00000460677 ZSCAN22P10073 491 aaPredicted RBP18.48■□□□□ 0.55
PCYT1A-212ENST00000460677 TROAPQ12815 778 aa18.48■□□□□ 0.55
PCYT1A-212ENST00000460677 NTRK3Q16288 839 aa18.48■□□□□ 0.55
PCYT1A-212ENST00000460677 FAM83AQ86UY5 434 aa18.48■□□□□ 0.55
PCYT1A-212ENST00000460677 CCDC17Q96LX7 622 aa18.48■□□□□ 0.55
PCYT1A-212ENST00000460677 GBP4Q96PP9 640 aa18.48■□□□□ 0.55
PCYT1A-212ENST00000460677 TRIM34Q9BYJ4 488 aa18.48■□□□□ 0.55
PCYT1A-212ENST00000460677 DNAJC18Q9H819 358 aa18.48■□□□□ 0.55
PCYT1A-212ENST00000460677 KAT14Q9H8E8 782 aa18.48■□□□□ 0.55
PCYT1A-212ENST00000460677 VEZTQ9HBM0 779 aa18.48■□□□□ 0.55
PCYT1A-212ENST00000460677 MTMR6Q9Y217 621 aa18.48■□□□□ 0.55
PCYT1A-212ENST00000460677 CNTNAP1P78357 1384 aa18.48■□□□□ 0.55
PCYT1A-212ENST00000460677 FDPSP14324 419 aaKnown RBP18.47■□□□□ 0.55
PCYT1A-212ENST00000460677 AKR1B1P15121 316 aa18.47■□□□□ 0.55
PCYT1A-212ENST00000460677 NOVP48745 357 aa18.47■□□□□ 0.55
PCYT1A-212ENST00000460677 RBM26Q5T8P6 1007 aaKnown RBP18.47■□□□□ 0.55
PCYT1A-212ENST00000460677 FOXD4L5Q5VV16 416 aaPredicted RBP18.47■□□□□ 0.55
PCYT1A-212ENST00000460677 FOXD4L4Q8WXT5 416 aaPredicted RBP18.47■□□□□ 0.55
PCYT1A-212ENST00000460677 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.47■□□□□ 0.55
PCYT1A-212ENST00000460677 RBM28Q9NW13 759 aaKnown RBP18.47■□□□□ 0.55
PCYT1A-212ENST00000460677 RNF181Q9P0P0 153 aa18.47■□□□□ 0.55
PCYT1A-212ENST00000460677 ORC3Q9UBD5 711 aaPredicted RBP18.47■□□□□ 0.55
PCYT1A-212ENST00000460677 GOLGB1Q14789 3259 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms