RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 ITGBL1O95965 494 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-206ENST00000460235 CAP2P40123 477 aa14.54□□□□□ -0.08
HDAC4-206ENST00000460235 TFAP4Q01664 338 aa14.54□□□□□ -0.08
HDAC4-206ENST00000460235 RABEP1Q15276 862 aa14.54□□□□□ -0.08
HDAC4-206ENST00000460235 ANKRD1Q15327 319 aa14.54□□□□□ -0.08
HDAC4-206ENST00000460235 DHX32Q7L7V1 743 aaKnown RBP14.54□□□□□ -0.08
HDAC4-206ENST00000460235 NEDD1Q8NHV4 660 aa14.54□□□□□ -0.08
HDAC4-206ENST00000460235 CHMP4CQ96CF2 233 aa14.54□□□□□ -0.08
HDAC4-206ENST00000460235 KLRG1Q96E93 195 aa14.54□□□□□ -0.08
HDAC4-206ENST00000460235 IL17RAQ96F46 866 aa14.54□□□□□ -0.08
HDAC4-206ENST00000460235 DYNLL2Q96FJ2 89 aa14.54□□□□□ -0.08
HDAC4-206ENST00000460235 JAKMIP1Q96N16 626 aaKnown RBP14.54□□□□□ -0.08
HDAC4-206ENST00000460235 TBC1D32Q96NH3 1257 aa14.54□□□□□ -0.08
HDAC4-206ENST00000460235 ZNF408Q9H9D4 720 aa14.54□□□□□ -0.08
HDAC4-206ENST00000460235 TCP11L1Q9NUJ3 509 aa14.54□□□□□ -0.08
HDAC4-206ENST00000460235 ANGEL1Q9UNK9 670 aaKnown RBP14.54□□□□□ -0.08
HDAC4-206ENST00000460235 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.54□□□□□ -0.08
HDAC4-206ENST00000460235 CDK5RAP2Q96SN8 1893 aa14.54□□□□□ -0.08
HDAC4-206ENST00000460235 BAZ2AQ9UIF9 1905 aaKnown RBP14.53□□□□□ -0.08
HDAC4-206ENST00000460235 KDM4AO75164 1064 aa14.53□□□□□ -0.08
HDAC4-206ENST00000460235 RASA1P20936 1047 aa14.53□□□□□ -0.08
HDAC4-206ENST00000460235 SHMT1P34896 483 aa14.53□□□□□ -0.08
HDAC4-206ENST00000460235 NOL9Q5SY16 702 aaKnown RBP14.53□□□□□ -0.08
HDAC4-206ENST00000460235 PRAMEF18Q5VWM3 479 aa14.53□□□□□ -0.08
HDAC4-206ENST00000460235 TBC1D10CQ8IV04 446 aa14.53□□□□□ -0.08
HDAC4-206ENST00000460235 SCYL3Q8IZE3 742 aa14.53□□□□□ -0.08
HDAC4-206ENST00000460235 STK11IPQ8N1F8 1099 aa14.53□□□□□ -0.08
HDAC4-206ENST00000460235 ARHGEF10LQ9HCE6 1279 aa14.53□□□□□ -0.08
HDAC4-206ENST00000460235 SYNPO2Q9UMS6 1093 aa14.53□□□□□ -0.08
HDAC4-206ENST00000460235 SCAF8Q9UPN6 1271 aaKnown RBP14.53□□□□□ -0.08
HDAC4-206ENST00000460235 B4E1Z4 1266 aa14.52□□□□□ -0.09
HDAC4-206ENST00000460235 ST18O60284 1047 aa14.52□□□□□ -0.09
HDAC4-206ENST00000460235 USP2O75604 605 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-206ENST00000460235 PRDM1O75626 825 aa14.52□□□□□ -0.09
HDAC4-206ENST00000460235 CASTP20810 708 aaKnown RBP14.52□□□□□ -0.09
HDAC4-206ENST00000460235 SYNE3Q6ZMZ3 975 aa14.52□□□□□ -0.09
HDAC4-206ENST00000460235 RUFY3Q7L099 469 aa14.52□□□□□ -0.09
HDAC4-206ENST00000460235 DGKHQ86XP1 1220 aa14.52□□□□□ -0.09
HDAC4-206ENST00000460235 SLC10A4Q96EP9 437 aa14.52□□□□□ -0.09
HDAC4-206ENST00000460235 ZSWIM6Q9HCJ5 1215 aa14.52□□□□□ -0.09
HDAC4-206ENST00000460235 ZSWIM5Q9P217 1185 aa14.52□□□□□ -0.09
HDAC4-206ENST00000460235 POLR2AP24928 1970 aaKnown RBP14.52□□□□□ -0.09
HDAC4-206ENST00000460235 USP17L5A8MUK1 530 aa14.51□□□□□ -0.09
HDAC4-206ENST00000460235 PHF20L1A8MW92 1017 aa14.51□□□□□ -0.09
HDAC4-206ENST00000460235 TRAF5O00463 557 aa14.51□□□□□ -0.09
HDAC4-206ENST00000460235 IFIT3O14879 490 aaKnown RBP14.51□□□□□ -0.09
HDAC4-206ENST00000460235 TTLL1O95922 423 aa14.51□□□□□ -0.09
HDAC4-206ENST00000460235 MCM2P49736 904 aa14.51□□□□□ -0.09
HDAC4-206ENST00000460235 RASEFQ8IZ41 740 aa14.51□□□□□ -0.09
HDAC4-206ENST00000460235 SLC44A5Q8NCS7 719 aa14.51□□□□□ -0.09
HDAC4-206ENST00000460235 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.51□□□□□ -0.09
HDAC4-206ENST00000460235 ZSCAN10Q96SZ4 725 aaPredicted RBP14.51□□□□□ -0.09
HDAC4-206ENST00000460235 LAMB1P07942 1786 aa14.51□□□□□ -0.09
HDAC4-206ENST00000460235 DDX60LQ5H9U9 1706 aaKnown RBP14.51□□□□□ -0.09
HDAC4-206ENST00000460235 PLIN4Q96Q06 1357 aa14.5□□□□□ -0.09
HDAC4-206ENST00000460235 PASKQ96RG2 1323 aa14.5□□□□□ -0.09
HDAC4-206ENST00000460235 TMEM88BA6NKF7 163 aa14.5□□□□□ -0.09
HDAC4-206ENST00000460235 PRC1O43663 620 aa14.5□□□□□ -0.09
HDAC4-206ENST00000460235 GH2P01242 217 aa14.5□□□□□ -0.09
HDAC4-206ENST00000460235 RPS6KB1P23443 525 aa14.5□□□□□ -0.09
HDAC4-206ENST00000460235 USP14P54578 494 aa14.5□□□□□ -0.09
HDAC4-206ENST00000460235 PRKG1Q13976 671 aa14.5□□□□□ -0.09
HDAC4-206ENST00000460235 RAB3GAP1Q15042 981 aa14.5□□□□□ -0.09
HDAC4-206ENST00000460235 ERO1BQ86YB8 467 aa14.5□□□□□ -0.09
HDAC4-206ENST00000460235 MB21D2Q8IYB1 491 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-206ENST00000460235 NBPF3Q9H094 633 aa14.5□□□□□ -0.09
HDAC4-206ENST00000460235 DNAJC18Q9H819 358 aa14.5□□□□□ -0.09
HDAC4-206ENST00000460235 PDRG1Q9NUG6 133 aa14.5□□□□□ -0.09
HDAC4-206ENST00000460235 NYAP2Q9P242 653 aa14.5□□□□□ -0.09
HDAC4-206ENST00000460235 ZBTB21Q9ULJ3 1066 aa14.5□□□□□ -0.09
HDAC4-206ENST00000460235 LAMA4Q16363 1823 aa14.5□□□□□ -0.09
HDAC4-206ENST00000460235 NEDD4P46934 1319 aa14.49□□□□□ -0.09
HDAC4-206ENST00000460235 FAM196BA6NMK8 535 aa14.49□□□□□ -0.09
HDAC4-206ENST00000460235 AKR1B1P15121 316 aa14.49□□□□□ -0.09
HDAC4-206ENST00000460235 LIFRP42702 1097 aa14.49□□□□□ -0.09
HDAC4-206ENST00000460235 NEK4P51957 841 aa14.49□□□□□ -0.09
HDAC4-206ENST00000460235 ICA1Q05084 483 aa14.49□□□□□ -0.09
HDAC4-206ENST00000460235 WTAPQ15007 396 aa14.49□□□□□ -0.09
HDAC4-206ENST00000460235 TMEM67Q5HYA8 995 aa14.49□□□□□ -0.09
HDAC4-206ENST00000460235 FAM47AQ5JRC9 791 aa14.49□□□□□ -0.09
HDAC4-206ENST00000460235 LDLRAD1Q5T700 205 aa14.49□□□□□ -0.09
HDAC4-206ENST00000460235 IFIT1BQ5T764 474 aaKnown RBP14.49□□□□□ -0.09
HDAC4-206ENST00000460235 CDAN1Q8IWY9 1227 aa14.49□□□□□ -0.09
HDAC4-206ENST00000460235 FBXL16Q8N461 479 aa14.49□□□□□ -0.09
HDAC4-206ENST00000460235 HHIPL1Q96JK4 782 aa14.49□□□□□ -0.09
HDAC4-206ENST00000460235 ALDH8A1Q9H2A2 487 aaPredicted RBP14.49□□□□□ -0.09
HDAC4-206ENST00000460235 MTMR4Q9NYA4 1195 aa14.49□□□□□ -0.09
HDAC4-206ENST00000460235 STX8Q9UNK0 236 aa14.49□□□□□ -0.09
HDAC4-206ENST00000460235 PAPPA2Q9BXP8 1791 aa14.48□□□□□ -0.09
HDAC4-206ENST00000460235 UTRNP46939 3433 aa14.48□□□□□ -0.09
HDAC4-206ENST00000460235 CCDC69A6NI79 296 aa14.48□□□□□ -0.09
HDAC4-206ENST00000460235 C19orf81C9J6K1 198 aa14.48□□□□□ -0.09
HDAC4-206ENST00000460235 GDF11O95390 407 aa14.48□□□□□ -0.09
HDAC4-206ENST00000460235 CALM1P0DP23 149 aa14.48□□□□□ -0.09
HDAC4-206ENST00000460235 CALM2P0DP24 149 aa14.48□□□□□ -0.09
HDAC4-206ENST00000460235 CALM3P0DP25 149 aa14.48□□□□□ -0.09
HDAC4-206ENST00000460235 TOP1P11387 765 aaKnown RBP14.48□□□□□ -0.09
HDAC4-206ENST00000460235 HUNKP57058 714 aa14.48□□□□□ -0.09
HDAC4-206ENST00000460235 PPATQ06203 517 aa14.48□□□□□ -0.09
HDAC4-206ENST00000460235 PPP2R5BQ15173 497 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms