RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 APBA3O96018 575 aa8.2□□□□□ -1.1
CCDC50-203ENST00000460064 RAG1P15918 1043 aa8.2□□□□□ -1.1
CCDC50-203ENST00000460064 NTF4P34130 210 aa8.2□□□□□ -1.1
CCDC50-203ENST00000460064 YARSP54577 528 aaKnown RBP8.2□□□□□ -1.1
CCDC50-203ENST00000460064 C19orf47Q8N9M1 422 aaKnown RBP8.2□□□□□ -1.1
CCDC50-203ENST00000460064 FBRSQ9HAH7 460 aa8.2□□□□□ -1.1
CCDC50-203ENST00000460064 FAM105AQ9NUU6 356 aa8.2□□□□□ -1.1
CCDC50-203ENST00000460064 ACTL7BQ9Y614 415 aa8.2□□□□□ -1.1
CCDC50-203ENST00000460064 FAM86C2PA6NEL3 165 aa8.19□□□□□ -1.1
CCDC50-203ENST00000460064 DDAH1O94760 285 aa8.19□□□□□ -1.1
CCDC50-203ENST00000460064 NEFMP07197 916 aa8.19□□□□□ -1.1
CCDC50-203ENST00000460064 GLB1P16278 677 aa8.19□□□□□ -1.1
CCDC50-203ENST00000460064 USP11P51784 963 aa8.19□□□□□ -1.1
CCDC50-203ENST00000460064 NRG1Q02297 640 aaPredicted RBP8.19□□□□□ -1.1
CCDC50-203ENST00000460064 DDR2Q16832 855 aa8.19□□□□□ -1.1
CCDC50-203ENST00000460064 UNC5AQ6ZN44 842 aa8.19□□□□□ -1.1
CCDC50-203ENST00000460064 MRPL41Q8IXM3 137 aaKnown RBP8.19□□□□□ -1.1
CCDC50-203ENST00000460064 SMYD4Q8IYR2 804 aaPredicted RBP8.19□□□□□ -1.1
CCDC50-203ENST00000460064 PHACTR4Q8IZ21 702 aa8.19□□□□□ -1.1
CCDC50-203ENST00000460064 FAM177A1Q8N128 213 aaPredicted RBP8.19□□□□□ -1.1
CCDC50-203ENST00000460064 TAB3Q8N5C8 712 aaPredicted RBP8.19□□□□□ -1.1
CCDC50-203ENST00000460064 C2CD4AQ8NCU7 369 aaPredicted RBP8.19□□□□□ -1.1
CCDC50-203ENST00000460064 ISL2Q96A47 359 aa8.19□□□□□ -1.1
CCDC50-203ENST00000460064 NACC1Q96RE7 527 aa8.19□□□□□ -1.1
CCDC50-203ENST00000460064 SLC9A7Q96T83 725 aa8.19□□□□□ -1.1
CCDC50-203ENST00000460064 CEP41Q9BYV8 373 aa8.19□□□□□ -1.1
CCDC50-203ENST00000460064 GSX1Q9H4S2 264 aaPredicted RBP8.19□□□□□ -1.1
CCDC50-203ENST00000460064 SLC12A7Q9Y666 1083 aa8.19□□□□□ -1.1
CCDC50-203ENST00000460064 TNFRSF10CO14798 259 aa8.18□□□□□ -1.1
CCDC50-203ENST00000460064 ACRP10323 421 aa8.18□□□□□ -1.1
CCDC50-203ENST00000460064 INSM1Q01101 510 aaPredicted RBP8.18□□□□□ -1.1
CCDC50-203ENST00000460064 NKG7Q16617 165 aa8.18□□□□□ -1.1
CCDC50-203ENST00000460064 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.18□□□□□ -1.1
CCDC50-203ENST00000460064 MICAL1Q8TDZ2 1067 aa8.18□□□□□ -1.1
CCDC50-203ENST00000460064 DEPDC7Q96QD5 511 aa8.18□□□□□ -1.1
CCDC50-203ENST00000460064 PCOLCE2Q9UKZ9 415 aa8.18□□□□□ -1.1
CCDC50-203ENST00000460064 TMA7Q9Y2S6 64 aaKnown RBP8.18□□□□□ -1.1
CCDC50-203ENST00000460064 GAS2O43903 313 aaKnown RBP8.17□□□□□ -1.1
CCDC50-203ENST00000460064 COL8A1P27658 744 aa8.17□□□□□ -1.1
CCDC50-203ENST00000460064 PREPP48147 710 aa8.17□□□□□ -1.1
CCDC50-203ENST00000460064 IREB2P48200 963 aaKnown RBP8.17□□□□□ -1.1
CCDC50-203ENST00000460064 SLBPQ14493 270 aaKnown RBP eCLIP8.17□□□□□ -1.1
CCDC50-203ENST00000460064 ZYXQ15942 572 aaKnown RBP8.17□□□□□ -1.1
CCDC50-203ENST00000460064 ZNF746Q6NUN9 644 aaPredicted RBP8.17□□□□□ -1.1
CCDC50-203ENST00000460064 SLFN12Q8IYM2 578 aa8.17□□□□□ -1.1
CCDC50-203ENST00000460064 WFDC12Q8WWY7 111 aa8.17□□□□□ -1.1
CCDC50-203ENST00000460064 DPH2Q9BQC3 489 aaPredicted RBP8.17□□□□□ -1.1
CCDC50-203ENST00000460064 CCDC113Q9H0I3 377 aa8.17□□□□□ -1.1
CCDC50-203ENST00000460064 SNTG2Q9NY99 539 aa8.17□□□□□ -1.1
CCDC50-203ENST00000460064 CADPSQ9ULU8 1353 aa8.17□□□□□ -1.1
CCDC50-203ENST00000460064 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.16□□□□□ -1.1
CCDC50-203ENST00000460064 FAM221BA6H8Z2 402 aa8.16□□□□□ -1.1
CCDC50-203ENST00000460064 RAB6AP20340 208 aa8.16□□□□□ -1.1
CCDC50-203ENST00000460064 GBP1P32455 592 aa8.16□□□□□ -1.1
CCDC50-203ENST00000460064 C6orf15Q6UXA7 325 aaPredicted RBP8.16□□□□□ -1.1
CCDC50-203ENST00000460064 LRP10Q7Z4F1 713 aa8.16□□□□□ -1.1
CCDC50-203ENST00000460064 UBE3DQ7Z6J8 389 aa8.16□□□□□ -1.1
CCDC50-203ENST00000460064 CCDC74BQ96LY2 380 aa8.16□□□□□ -1.1
CCDC50-203ENST00000460064 UBL7Q96S82 380 aaPredicted RBP8.16□□□□□ -1.1
CCDC50-203ENST00000460064 KIF2CQ99661 725 aa8.16□□□□□ -1.1
CCDC50-203ENST00000460064 LGR6Q9HBX8 967 aa8.16□□□□□ -1.1
CCDC50-203ENST00000460064 MAPK8IP1Q9UQF2 711 aa8.16□□□□□ -1.1
CCDC50-203ENST00000460064 LTBP3Q9NS15 1303 aa8.15□□□□□ -1.1
CCDC50-203ENST00000460064 GJB6O95452 261 aa8.15□□□□□ -1.1
CCDC50-203ENST00000460064 NOS3P29474 1203 aa8.15□□□□□ -1.1
CCDC50-203ENST00000460064 POLR2BP30876 1174 aaKnown RBP8.15□□□□□ -1.1
CCDC50-203ENST00000460064 PRAMEF13Q5VWM6 474 aa8.15□□□□□ -1.1
CCDC50-203ENST00000460064 CDPF1Q6NVV7 123 aa8.15□□□□□ -1.1
CCDC50-203ENST00000460064 FAM178BQ8IXR5 827 aa8.15□□□□□ -1.1
CCDC50-203ENST00000460064 XAGE3Q8WTP9 111 aa8.15□□□□□ -1.1
CCDC50-203ENST00000460064 FOXQ1Q9C009 403 aa8.15□□□□□ -1.1
CCDC50-203ENST00000460064 PCDHB10Q9UN67 800 aa8.15□□□□□ -1.1
CCDC50-203ENST00000460064 MSRB2Q9Y3D2 182 aa8.15□□□□□ -1.1
CCDC50-203ENST00000460064 RGS13O14921 159 aa8.14□□□□□ -1.11
CCDC50-203ENST00000460064 PDPK1O15530 556 aa8.14□□□□□ -1.11
CCDC50-203ENST00000460064 CST3P01034 146 aaPredicted RBP8.14□□□□□ -1.11
CCDC50-203ENST00000460064 CAP2P40123 477 aa8.14□□□□□ -1.11
CCDC50-203ENST00000460064 CCNFP41002 786 aa8.14□□□□□ -1.11
CCDC50-203ENST00000460064 IFRD2Q12894 506 aaPredicted RBP8.14□□□□□ -1.11
CCDC50-203ENST00000460064 RASA3Q14644 834 aa8.14□□□□□ -1.11
CCDC50-203ENST00000460064 VHLLQ6RSH7 139 aa8.14□□□□□ -1.11
CCDC50-203ENST00000460064 BAHD1Q8TBE0 780 aaPredicted RBP8.14□□□□□ -1.11
CCDC50-203ENST00000460064 FBLIM1Q8WUP2 373 aa8.14□□□□□ -1.11
CCDC50-203ENST00000460064 YIPF2Q9BWQ6 316 aa8.14□□□□□ -1.11
CCDC50-203ENST00000460064 ACSS3Q9H6R3 686 aa8.14□□□□□ -1.11
CCDC50-203ENST00000460064 PHAXQ9H814 394 aaKnown RBP8.14□□□□□ -1.11
CCDC50-203ENST00000460064 DAGLAQ9Y4D2 1042 aa8.14□□□□□ -1.11
CCDC50-203ENST00000460064 LRIG2O94898 1065 aa8.13□□□□□ -1.11
CCDC50-203ENST00000460064 NFICP08651 508 aa8.13□□□□□ -1.11
CCDC50-203ENST00000460064 RXRBP28702 533 aa8.13□□□□□ -1.11
CCDC50-203ENST00000460064 GNPTABQ3T906 1256 aa8.13□□□□□ -1.11
CCDC50-203ENST00000460064 Q6ZS46 218 aa8.13□□□□□ -1.11
CCDC50-203ENST00000460064 MFSD2AQ8NA29 543 aa8.13□□□□□ -1.11
CCDC50-203ENST00000460064 FAM46AQ96IP4 442 aaKnown RBP8.13□□□□□ -1.11
CCDC50-203ENST00000460064 DHRS1Q96LJ7 313 aa8.13□□□□□ -1.11
CCDC50-203ENST00000460064 DNAJC7Q99615 494 aa8.13□□□□□ -1.11
CCDC50-203ENST00000460064 TBX22Q9Y458 520 aa8.13□□□□□ -1.11
CCDC50-203ENST00000460064 B2RBV5 119 aa8.12□□□□□ -1.11
CCDC50-203ENST00000460064 CANXP27824 592 aaKnown RBP8.12□□□□□ -1.11
CCDC50-203ENST00000460064 CHMP4BP1P59074 171 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms