RNA–Protein interactions for RNA: ENST00000459979.2

HOXD3-204, Transcript of homeobox D3, humanhuman

TSL 1 (best)

Gene HOXD3, Length 1,055 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-204ENST00000459979 GABRQQ9UN88 632 aa22.38■■□□□ 1.17
HOXD3-204ENST00000459979 DOCK3Q8IZD9 2030 aa22.38■■□□□ 1.17
HOXD3-204ENST00000459979 A0A0G2JLL6 359 aaPredicted RBP22.37■■□□□ 1.17
HOXD3-204ENST00000459979 H0YGN5 161 aa22.37■■□□□ 1.17
HOXD3-204ENST00000459979 PRRT2Q7Z6L0 340 aaPredicted RBP22.37■■□□□ 1.17
HOXD3-204ENST00000459979 PALD1Q9ULE6 856 aa22.37■■□□□ 1.17
HOXD3-204ENST00000459979 AFG3L2Q9Y4W6 797 aa22.37■■□□□ 1.17
HOXD3-204ENST00000459979 FAM196BA6NMK8 535 aa22.36■■□□□ 1.17
HOXD3-204ENST00000459979 USP5P45974 858 aa22.36■■□□□ 1.17
HOXD3-204ENST00000459979 FXR1P51114 621 aaKnown RBP eCLIP22.36■■□□□ 1.17
HOXD3-204ENST00000459979 FCGRTP55899 365 aa22.36■■□□□ 1.17
HOXD3-204ENST00000459979 ZSCAN25Q6NSZ9 544 aa22.36■■□□□ 1.17
HOXD3-204ENST00000459979 EXOC6Q8TAG9 804 aa22.36■■□□□ 1.17
HOXD3-204ENST00000459979 BIN2Q9UBW5 565 aaPredicted RBP22.36■■□□□ 1.17
HOXD3-204ENST00000459979 SALL3Q9BXA9 1300 aa22.35■■□□□ 1.17
HOXD3-204ENST00000459979 HLA-DOAP06340 250 aa22.35■■□□□ 1.17
HOXD3-204ENST00000459979 CCL5P13501 91 aa22.35■■□□□ 1.17
HOXD3-204ENST00000459979 CAP2P40123 477 aa22.35■■□□□ 1.17
HOXD3-204ENST00000459979 FASTKD5Q7L8L6 764 aaKnown RBP22.35■■□□□ 1.17
HOXD3-204ENST00000459979 KBTBD3Q8NAB2 608 aa22.35■■□□□ 1.17
HOXD3-204ENST00000459979 CRNKL1Q9BZJ0 848 aaKnown RBP22.35■■□□□ 1.17
HOXD3-204ENST00000459979 EHD4Q9H223 541 aa22.35■■□□□ 1.17
HOXD3-204ENST00000459979 RWDD1Q9H446 243 aaPredicted RBP22.35■■□□□ 1.17
HOXD3-204ENST00000459979 TRIM75PA6NK02 468 aa22.34■■□□□ 1.17
HOXD3-204ENST00000459979 ERC2O15083 957 aa22.34■■□□□ 1.17
HOXD3-204ENST00000459979 ANKRD45Q5TZF3 282 aa22.34■■□□□ 1.17
HOXD3-204ENST00000459979 SMC5Q8IY18 1101 aa22.34■■□□□ 1.17
HOXD3-204ENST00000459979 PI4K2BQ8TCG2 481 aa22.34■■□□□ 1.17
HOXD3-204ENST00000459979 TBC1D2Q9BYX2 928 aa22.34■■□□□ 1.17
HOXD3-204ENST00000459979 DNAJC18Q9H819 358 aa22.34■■□□□ 1.17
HOXD3-204ENST00000459979 GINM1Q9NU53 330 aa22.34■■□□□ 1.17
HOXD3-204ENST00000459979 CEP290O15078 2479 aa22.34■■□□□ 1.17
HOXD3-204ENST00000459979 GLRX3O76003 335 aaKnown RBP22.33■■□□□ 1.17
HOXD3-204ENST00000459979 RRP1BQ14684 758 aaKnown RBP22.33■■□□□ 1.17
HOXD3-204ENST00000459979 TSHZ3Q63HK5 1081 aa22.33■■□□□ 1.17
HOXD3-204ENST00000459979 TTC6Q86TZ1 520 aa22.33■■□□□ 1.17
HOXD3-204ENST00000459979 LCORLQ8N3X6 602 aa22.33■■□□□ 1.17
HOXD3-204ENST00000459979 OTUD7AQ8TE49 926 aaPredicted RBP22.33■■□□□ 1.17
HOXD3-204ENST00000459979 RNF208Q9H0X6 261 aa22.33■■□□□ 1.17
HOXD3-204ENST00000459979 ZBTB47Q9UFB7 747 aaPredicted RBP22.33■■□□□ 1.17
HOXD3-204ENST00000459979 SAP30BPQ9UHR5 308 aaKnown RBP22.33■■□□□ 1.17
HOXD3-204ENST00000459979 DDX60LQ5H9U9 1706 aaKnown RBP22.33■■□□□ 1.17
HOXD3-204ENST00000459979 MX1P20591 662 aa22.32■■□□□ 1.16
HOXD3-204ENST00000459979 CRACR2BQ8N4Y2 399 aaPredicted RBP22.32■■□□□ 1.16
HOXD3-204ENST00000459979 LOC285556D6RIA3 1793 aa22.31■■□□□ 1.16
HOXD3-204ENST00000459979 GJB1P08034 283 aa22.31■■□□□ 1.16
HOXD3-204ENST00000459979 GJA8P48165 433 aa22.31■■□□□ 1.16
HOXD3-204ENST00000459979 UBXN2AP68543 259 aa22.31■■□□□ 1.16
HOXD3-204ENST00000459979 SLFNL1Q499Z3 407 aa22.31■■□□□ 1.16
HOXD3-204ENST00000459979 DPF3Q92784 378 aa22.31■■□□□ 1.16
HOXD3-204ENST00000459979 UNC93B1Q9H1C4 597 aa22.31■■□□□ 1.16
HOXD3-204ENST00000459979 DCP1AQ9NPI6 582 aaPredicted RBP22.31■■□□□ 1.16
HOXD3-204ENST00000459979 STAP2Q9UGK3 403 aa22.31■■□□□ 1.16
HOXD3-204ENST00000459979 SERPINB13Q9UIV8 391 aa22.31■■□□□ 1.16
HOXD3-204ENST00000459979 TAOK2Q9UL54 1235 aa22.31■■□□□ 1.16
HOXD3-204ENST00000459979 NAV1Q8NEY1 1877 aa22.3■■□□□ 1.16
HOXD3-204ENST00000459979 ZFYP08048 801 aaPredicted RBP22.3■■□□□ 1.16
HOXD3-204ENST00000459979 ASNSP08243 561 aa22.3■■□□□ 1.16
HOXD3-204ENST00000459979 ELNP15502 786 aa22.3■■□□□ 1.16
HOXD3-204ENST00000459979 FLT3LGP49771 235 aa22.3■■□□□ 1.16
HOXD3-204ENST00000459979 TREML2Q5T2D2 321 aa22.3■■□□□ 1.16
HOXD3-204ENST00000459979 TATDN1Q6P1N9 297 aa22.3■■□□□ 1.16
HOXD3-204ENST00000459979 SMCR8Q8TEV9 937 aaPredicted RBP22.3■■□□□ 1.16
HOXD3-204ENST00000459979 TRIM34Q9BYJ4 488 aa22.3■■□□□ 1.16
HOXD3-204ENST00000459979 ARMT1Q9H993 441 aa22.3■■□□□ 1.16
HOXD3-204ENST00000459979 ATP8A2Q9NTI2 1148 aa22.3■■□□□ 1.16
HOXD3-204ENST00000459979 TRIOBPQ9H2D6 2365 aa22.3■■□□□ 1.16
HOXD3-204ENST00000459979 ADCY3O60266 1144 aa22.29■■□□□ 1.16
HOXD3-204ENST00000459979 MBD4O95243 580 aa22.29■■□□□ 1.16
HOXD3-204ENST00000459979 CHGBP05060 677 aa22.29■■□□□ 1.16
HOXD3-204ENST00000459979 CHRDL2Q6WN34 429 aa22.29■■□□□ 1.16
HOXD3-204ENST00000459979 SLAIN1Q8ND83 568 aa22.29■■□□□ 1.16
HOXD3-204ENST00000459979 NKX2-3Q8TAU0 364 aa22.29■■□□□ 1.16
HOXD3-204ENST00000459979 SLC45A1Q9Y2W3 748 aa22.29■■□□□ 1.16
HOXD3-204ENST00000459979 USP17L5A8MUK1 530 aa22.28■■□□□ 1.16
HOXD3-204ENST00000459979 TNPO2O14787 897 aaKnown RBP22.28■■□□□ 1.16
HOXD3-204ENST00000459979 RNF113AO15541 343 aaKnown RBP22.28■■□□□ 1.16
HOXD3-204ENST00000459979 IGHDP01880 384 aa22.28■■□□□ 1.16
HOXD3-204ENST00000459979 PLCD1P51178 756 aa22.28■■□□□ 1.16
HOXD3-204ENST00000459979 GABPAQ06546 454 aa22.28■■□□□ 1.16
HOXD3-204ENST00000459979 LRRFIP1Q32MZ4 808 aaKnown RBP22.28■■□□□ 1.16
HOXD3-204ENST00000459979 UBE2Q1Q7Z7E8 422 aa22.28■■□□□ 1.16
HOXD3-204ENST00000459979 ANKRD13CQ8N6S4 541 aa22.28■■□□□ 1.16
HOXD3-204ENST00000459979 ZNF280CQ8ND82 737 aa22.28■■□□□ 1.16
HOXD3-204ENST00000459979 U2AF1L4Q8WU68 220 aaKnown RBP22.28■■□□□ 1.16
HOXD3-204ENST00000459979 SDR42E1Q8WUS8 393 aa22.28■■□□□ 1.16
HOXD3-204ENST00000459979 WDR18Q9BV38 432 aa22.28■■□□□ 1.16
HOXD3-204ENST00000459979 PUS7LQ9H0K6 701 aaKnown RBP22.28■■□□□ 1.16
HOXD3-204ENST00000459979 MCM9Q9NXL9 1143 aa22.28■■□□□ 1.16
HOXD3-204ENST00000459979 AGTPBP1Q9UPW5 1226 aa22.28■■□□□ 1.16
HOXD3-204ENST00000459979 POLR3DP05423 398 aaPredicted RBP22.27■■□□□ 1.16
HOXD3-204ENST00000459979 JAG1P78504 1218 aa22.27■■□□□ 1.16
HOXD3-204ENST00000459979 APPBP2Q92624 585 aa22.27■■□□□ 1.16
HOXD3-204ENST00000459979 PRKAB2O43741 272 aa22.26■■□□□ 1.15
HOXD3-204ENST00000459979 INHAP05111 366 aa22.26■■□□□ 1.15
HOXD3-204ENST00000459979 PDE1AP54750 535 aa22.26■■□□□ 1.15
HOXD3-204ENST00000459979 SPP2Q13103 211 aa22.26■■□□□ 1.15
HOXD3-204ENST00000459979 AS3MTQ9HBK9 375 aa22.26■■□□□ 1.15
HOXD3-204ENST00000459979 ALPK3Q96L96 1907 aa22.25■■□□□ 1.15
HOXD3-204ENST00000459979 FARP2O94887 1054 aaPredicted RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms