RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 GOLGA8AA7E2F4 631 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 GNPATO15228 680 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 IGSF3O75054 1194 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 DEXIO95424 95 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 SERPINC1P01008 464 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 MMP1P03956 469 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 SLFN14P0C7P3 912 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 TOP1P11387 765 aaKnown RBP7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 PDE6AP16499 860 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 ZNF18P17022 549 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 ITGA6P23229 1130 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 GTF2E1P29083 439 aaPredicted RBP7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 FOSBP53539 338 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 EIF5P55010 431 aaKnown RBP7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 MAP3K12Q12852 859 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 SEMA3FQ13275 785 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 SART3Q15020 963 aaKnown RBP7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 R3HDM1Q15032 1099 aaKnown RBP7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 PUM3Q15397 648 aaKnown RBP7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 AKNAD1Q5T1N1 836 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 JAKMIP3Q5VZ66 844 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 OTUD7BQ6GQQ9 843 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 TRIM65Q6PJ69 517 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 METTL16Q86W50 562 aaKnown RBP7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 TBC1D10CQ8IV04 446 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 NOSTRINQ8IVI9 506 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 REXO1L1PQ8IX06 675 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 TRIM22Q8IYM9 498 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 IFNL3Q8IZI9 196 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 MSL3Q8N5Y2 521 aaKnown RBP7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 LINC00116Q8NCU8 138 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 CNNM3Q8NE01 707 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 PYM1Q9BRP8 204 aaKnown RBP7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 NAA15Q9BXJ9 866 aaKnown RBP7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 RNF41Q9H4P4 317 aaPredicted RBP7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 GPHNQ9NQX3 736 aaPredicted RBP7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 FAM217BQ9NTX9 383 aaPredicted RBP7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 TRMT1Q9NXH9 659 aaKnown RBP7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 ANAPC4Q9UJX5 808 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 SRPRBQ9Y5M8 271 aaKnown RBP7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 MAST2Q6P0Q8 1798 aa7.02□□□□□ -1.29
UBQLN4-202ENST00000459954 UBN2Q6ZU65 1347 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 ZNF532Q9HCE3 1301 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 CACNA1SQ13698 1873 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 SPDYE4A6NLX3 237 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 SLC5A1P13866 664 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 LMOD1P29536 600 aaPredicted RBP7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 CDC27P30260 824 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 PDE4CQ08493 712 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 ITPK1Q13572 414 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 GNL2Q13823 731 aaKnown RBP7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 MORC3Q14149 939 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 TERF2Q15554 542 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 LONRF3Q496Y0 759 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 TMEM67Q5HYA8 995 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 SPECC1LQ69YQ0 1117 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 INTS5Q6P9B9 1019 aaKnown RBP7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 FBXO38Q6PIJ6 1188 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 SYT10Q6XYQ8 523 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 TMEM139Q8IV31 216 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 AIDAQ96BJ3 306 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 CCDC51Q96ER9 411 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 FAM89AQ96GI7 184 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 SLC4A9Q96Q91 983 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 PANX2Q96RD6 677 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 RNF26Q9BY78 433 aaPredicted RBP7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 NACAP1Q9BZK3 213 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 NAPBQ9H115 298 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 PIH1D3Q9NQM4 214 aaKnown RBP7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 CNNM1Q9NRU3 951 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 AATFQ9NY61 560 aaKnown RBP eCLIP7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 ZSWIM5Q9P217 1185 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 NARFQ9UHQ1 456 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 FBXO2Q9UK22 296 aaPredicted RBP7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 PCDHA5Q9Y5H7 936 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 SLC12A7Q9Y666 1083 aa7.01□□□□□ -1.29
UBQLN4-202ENST00000459954 ERICH2A1L162 156 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 CCDC66A2RUB6 948 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 B4E1Z4 1266 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 BIN1O00499 593 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 IRS4O14654 1257 aaPredicted RBP7□□□□□ -1.29
UBQLN4-202ENST00000459954 IFIT3O14879 490 aaKnown RBP7□□□□□ -1.29
UBQLN4-202ENST00000459954 RANBP6O60518 1105 aaKnown RBP7□□□□□ -1.29
UBQLN4-202ENST00000459954 TADA3O75528 432 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 ZRANB2O95218 330 aaKnown RBP eCLIP7□□□□□ -1.29
UBQLN4-202ENST00000459954 TUBBP07437 444 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 CALM1P0DP23 149 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 CALM2P0DP24 149 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 CALM3P0DP25 149 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 XBP1P17861 261 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 FECHP22830 423 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 MARCKSP29966 332 aaPredicted RBP7□□□□□ -1.29
UBQLN4-202ENST00000459954 PLCD1P51178 756 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 MAP3K9P80192 1104 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 CACNB1Q02641 598 aaPredicted RBP7□□□□□ -1.29
UBQLN4-202ENST00000459954 NR1I3Q14994 352 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 WTAPQ15007 396 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 POSTNQ15063 836 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 ELF2Q15723 593 aa7□□□□□ -1.29
UBQLN4-202ENST00000459954 RTN1Q16799 776 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms