RNA–Protein interactions for RNA: ENST00000459799.1

SCNM1-203, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 619 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-203ENST00000459799 HERVK_113P62684 666 aa11.31□□□□□ -0.6
SCNM1-203ENST00000459799 PUM3Q15397 648 aaKnown RBP11.31□□□□□ -0.6
SCNM1-203ENST00000459799 TRIM60Q495X7 471 aa11.31□□□□□ -0.6
SCNM1-203ENST00000459799 GPRC5AQ8NFJ5 357 aa11.31□□□□□ -0.6
SCNM1-203ENST00000459799 NECAB3Q96P71 396 aaPredicted RBP11.31□□□□□ -0.6
SCNM1-203ENST00000459799 OSBPL5Q9H0X9 879 aaPredicted RBP11.31□□□□□ -0.6
SCNM1-203ENST00000459799 ZNF576Q9H609 170 aa11.31□□□□□ -0.6
SCNM1-203ENST00000459799 GBF1Q92538 1859 aa11.31□□□□□ -0.6
SCNM1-203ENST00000459799 MYO9BQ13459 2157 aa11.31□□□□□ -0.6
SCNM1-203ENST00000459799 UTYO14607 1347 aa11.31□□□□□ -0.6
SCNM1-203ENST00000459799 TBC1D12O60347 775 aa11.3□□□□□ -0.6
SCNM1-203ENST00000459799 MSCO60682 206 aa11.3□□□□□ -0.6
SCNM1-203ENST00000459799 LDHBP07195 334 aaKnown RBP11.3□□□□□ -0.6
SCNM1-203ENST00000459799 ITGB8P26012 769 aa11.3□□□□□ -0.6
SCNM1-203ENST00000459799 ZEB1P37275 1124 aaPredicted RBP11.3□□□□□ -0.6
SCNM1-203ENST00000459799 ERVK-9P63128 1117 aa11.3□□□□□ -0.6
SCNM1-203ENST00000459799 ERVK-24P63145 666 aa11.3□□□□□ -0.6
SCNM1-203ENST00000459799 IRX3P78415 501 aaPredicted RBP11.3□□□□□ -0.6
SCNM1-203ENST00000459799 MRPS5P82675 430 aaKnown RBP11.3□□□□□ -0.6
SCNM1-203ENST00000459799 RRP1BQ14684 758 aaKnown RBP11.3□□□□□ -0.6
SCNM1-203ENST00000459799 RABL6Q3YEC7 729 aaPredicted RBP11.3□□□□□ -0.6
SCNM1-203ENST00000459799 AKNAD1Q5T1N1 836 aa11.3□□□□□ -0.6
SCNM1-203ENST00000459799 SLC39A5Q6ZMH5 540 aa11.3□□□□□ -0.6
SCNM1-203ENST00000459799 PPM1EQ8WY54 764 aa11.3□□□□□ -0.6
SCNM1-203ENST00000459799 P2RX7Q99572 595 aaKnown RBP11.3□□□□□ -0.6
SCNM1-203ENST00000459799 TBC1D2Q9BYX2 928 aa11.3□□□□□ -0.6
SCNM1-203ENST00000459799 RBPJLQ9UBG7 517 aa11.3□□□□□ -0.6
SCNM1-203ENST00000459799 HCN4Q9Y3Q4 1203 aa11.3□□□□□ -0.6
SCNM1-203ENST00000459799 SALL1Q9NSC2 1324 aa11.3□□□□□ -0.6
SCNM1-203ENST00000459799 IFIT1P09914 478 aaKnown RBP11.29□□□□□ -0.6
SCNM1-203ENST00000459799 ATXN8OSP0DMR3 200 aa11.29□□□□□ -0.6
SCNM1-203ENST00000459799 HOXA7P31268 230 aaPredicted RBP11.29□□□□□ -0.6
SCNM1-203ENST00000459799 MAP2K5Q13163 448 aa11.29□□□□□ -0.6
SCNM1-203ENST00000459799 PICALMQ13492 652 aa11.29□□□□□ -0.6
SCNM1-203ENST00000459799 MTMR2Q13614 643 aa11.29□□□□□ -0.6
SCNM1-203ENST00000459799 Q3C1V9 767 aa11.29□□□□□ -0.6
SCNM1-203ENST00000459799 GJC2Q5T442 439 aaPredicted RBP11.29□□□□□ -0.6
SCNM1-203ENST00000459799 PLEKHH3Q7Z736 793 aa11.29□□□□□ -0.6
SCNM1-203ENST00000459799 ANKRD44Q8N8A2 993 aa11.29□□□□□ -0.6
SCNM1-203ENST00000459799 TRPV1Q8NER1 839 aa11.29□□□□□ -0.6
SCNM1-203ENST00000459799 KLHDC4Q8TBB5 520 aa11.29□□□□□ -0.6
SCNM1-203ENST00000459799 BICC1Q9H694 974 aaKnown RBP11.29□□□□□ -0.6
SCNM1-203ENST00000459799 C9orf78Q9NZ63 289 aaPredicted RBP11.29□□□□□ -0.6
SCNM1-203ENST00000459799 WDFY4Q6ZS81 3184 aa11.29□□□□□ -0.6
SCNM1-203ENST00000459799 CDK5RAP2Q96SN8 1893 aa11.28□□□□□ -0.6
SCNM1-203ENST00000459799 IGHA2P01877 340 aa11.28□□□□□ -0.6
SCNM1-203ENST00000459799 NBPF7P0C2Y1 421 aaPredicted RBP11.28□□□□□ -0.6
SCNM1-203ENST00000459799 CYBAP13498 195 aa11.28□□□□□ -0.6
SCNM1-203ENST00000459799 MFSD14CQ5VZR4 134 aa11.28□□□□□ -0.6
SCNM1-203ENST00000459799 TIFAQ96CG3 184 aa11.28□□□□□ -0.6
SCNM1-203ENST00000459799 SNX27Q96L92 541 aa11.28□□□□□ -0.6
SCNM1-203ENST00000459799 GAS2L1Q99501 681 aaPredicted RBP11.28□□□□□ -0.6
SCNM1-203ENST00000459799 LRFN3Q9BTN0 628 aa11.28□□□□□ -0.6
SCNM1-203ENST00000459799 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.28□□□□□ -0.6
SCNM1-203ENST00000459799 LRRC37A2A6NM11 1700 aa11.27□□□□□ -0.61
SCNM1-203ENST00000459799 USP17L5A8MUK1 530 aa11.27□□□□□ -0.61
SCNM1-203ENST00000459799 ALDH1L1O75891 902 aa11.27□□□□□ -0.61
SCNM1-203ENST00000459799 CAP2P40123 477 aa11.27□□□□□ -0.61
SCNM1-203ENST00000459799 ADGRE1Q14246 886 aa11.27□□□□□ -0.61
SCNM1-203ENST00000459799 C1orf53Q5VUE5 145 aa11.27□□□□□ -0.61
SCNM1-203ENST00000459799 PAGR1Q9BTK6 254 aa11.27□□□□□ -0.61
SCNM1-203ENST00000459799 PRDM12Q9H4Q4 367 aa11.27□□□□□ -0.61
SCNM1-203ENST00000459799 FOCADQ5VW36 1801 aa11.27□□□□□ -0.61
SCNM1-203ENST00000459799 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.26□□□□□ -0.61
SCNM1-203ENST00000459799 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.26□□□□□ -0.61
SCNM1-203ENST00000459799 KBTBD13C9JR72 458 aa11.26□□□□□ -0.61
SCNM1-203ENST00000459799 HOXC6P09630 235 aa11.26□□□□□ -0.61
SCNM1-203ENST00000459799 SLC5A1P13866 664 aa11.26□□□□□ -0.61
SCNM1-203ENST00000459799 CNGA1P29973 690 aa11.26□□□□□ -0.61
SCNM1-203ENST00000459799 CYP2C19P33261 490 aa11.26□□□□□ -0.61
SCNM1-203ENST00000459799 BTDP43251 543 aa11.26□□□□□ -0.61
SCNM1-203ENST00000459799 BACE1P56817 501 aa11.26□□□□□ -0.61
SCNM1-203ENST00000459799 RHBDL3P58872 404 aa11.26□□□□□ -0.61
SCNM1-203ENST00000459799 IL27Q8NEV9 243 aa11.26□□□□□ -0.61
SCNM1-203ENST00000459799 LPIN2Q92539 896 aa11.26□□□□□ -0.61
SCNM1-203ENST00000459799 EDC3Q96F86 508 aaKnown RBP11.26□□□□□ -0.61
SCNM1-203ENST00000459799 WDR18Q9BV38 432 aa11.26□□□□□ -0.61
SCNM1-203ENST00000459799 AS3MTQ9HBK9 375 aa11.26□□□□□ -0.61
SCNM1-203ENST00000459799 FANCIQ9NVI1 1328 aa11.26□□□□□ -0.61
SCNM1-203ENST00000459799 CNMDO75829 334 aa11.25□□□□□ -0.61
SCNM1-203ENST00000459799 BMP1P13497 986 aa11.25□□□□□ -0.61
SCNM1-203ENST00000459799 PBX2P40425 430 aa11.25□□□□□ -0.61
SCNM1-203ENST00000459799 TLE2Q04725 743 aa11.25□□□□□ -0.61
SCNM1-203ENST00000459799 FPGSQ05932 587 aa11.25□□□□□ -0.61
SCNM1-203ENST00000459799 CCDC85BQ15834 202 aaPredicted RBP11.25□□□□□ -0.61
SCNM1-203ENST00000459799 CCAR1Q8IX12 1150 aaKnown RBP11.25□□□□□ -0.61
SCNM1-203ENST00000459799 ARRDC4Q8NCT1 418 aa11.25□□□□□ -0.61
SCNM1-203ENST00000459799 NPLOC4Q8TAT6 608 aa11.25□□□□□ -0.61
SCNM1-203ENST00000459799 GTF3C2Q8WUA4 911 aaPredicted RBP11.25□□□□□ -0.61
SCNM1-203ENST00000459799 PBX4Q9BYU1 374 aa11.25□□□□□ -0.61
SCNM1-203ENST00000459799 SRCIN1Q9C0H9 1055 aa11.25□□□□□ -0.61
SCNM1-203ENST00000459799 EPHX3Q9H6B9 360 aa11.25□□□□□ -0.61
SCNM1-203ENST00000459799 NDUFB9Q9Y6M9 179 aa11.25□□□□□ -0.61
SCNM1-203ENST00000459799 A0A0G2JMZ2 1700 aa11.25□□□□□ -0.61
SCNM1-203ENST00000459799 MROH7-TTC4A0A0A0MT08 1334 aa11.25□□□□□ -0.61
SCNM1-203ENST00000459799 KIAA0355O15063 1070 aa11.24□□□□□ -0.61
SCNM1-203ENST00000459799 VAMP4O75379 141 aa11.24□□□□□ -0.61
SCNM1-203ENST00000459799 CLTBP09497 229 aa11.24□□□□□ -0.61
SCNM1-203ENST00000459799 ADCYAP1R1P41586 468 aa11.24□□□□□ -0.61
SCNM1-203ENST00000459799 JAG1P78504 1218 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms