RNA–Protein interactions for RNA: ENST00000459750.5

MCF2L2-204, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 3,090 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-204ENST00000459750 CACNB3P54284 484 aa10.4□□□□□ -0.74
MCF2L2-204ENST00000459750 FAM193AP78312 1265 aa10.4□□□□□ -0.74
MCF2L2-204ENST00000459750 TFAP4Q01664 338 aa10.4□□□□□ -0.74
MCF2L2-204ENST00000459750 LONRF3Q496Y0 759 aa10.4□□□□□ -0.74
MCF2L2-204ENST00000459750 KLHL10Q6JEL2 608 aa10.4□□□□□ -0.74
MCF2L2-204ENST00000459750 SHC4Q6S5L8 630 aa10.4□□□□□ -0.74
MCF2L2-204ENST00000459750 SHISA4Q96DD7 197 aa10.4□□□□□ -0.74
MCF2L2-204ENST00000459750 EEF2KMTQ96G04 330 aa10.4□□□□□ -0.74
MCF2L2-204ENST00000459750 TMEM87BQ96K49 555 aa10.4□□□□□ -0.74
MCF2L2-204ENST00000459750 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.4□□□□□ -0.74
MCF2L2-204ENST00000459750 DCP1AQ9NPI6 582 aaPredicted RBP10.4□□□□□ -0.74
MCF2L2-204ENST00000459750 SERPINB2P05120 415 aa10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 LDHBP07195 334 aaKnown RBP10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 ATP1A3P13637 1013 aa10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 TRMT44Q8IYL2 757 aaKnown RBP10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 FMR1NBQ8N0W7 255 aaPredicted RBP10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 STAG2Q8N3U4 1231 aa10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 ZNF512BQ96KM6 892 aaPredicted RBP10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 ZSCAN10Q96SZ4 725 aaPredicted RBP10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 RTEL1Q9NZ71 1219 aa10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 BAZ2AQ9UIF9 1905 aaKnown RBP10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 FAM196BA6NMK8 535 aa10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 POLR2DO15514 142 aaKnown RBP10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 SAFBQ15424 915 aaKnown RBP eCLIP10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 IQCA1Q86XH1 822 aa10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 ENGASEQ8NFI3 743 aa10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 NYXQ9GZU5 481 aa10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 KCNQ5Q9NR82 932 aa10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 PLCH1Q4KWH8 1693 aa10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 CDKL5O76039 1030 aa10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 TOB1P50616 345 aaPredicted RBP10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 GTF2IP78347 998 aa10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 NOLC1Q14978 699 aaKnown RBP eCLIP10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 TAF3Q5VWG9 929 aa10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 ADALQ6DHV7 355 aa10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 SMYD4Q8IYR2 804 aaPredicted RBP10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 CRACR2BQ8N4Y2 399 aaPredicted RBP10.39□□□□□ -0.75
MCF2L2-204ENST00000459750 FBXO33Q7Z6M2 555 aa10.38□□□□□ -0.75
MCF2L2-204ENST00000459750 CATIPQ7Z7H3 387 aa10.38□□□□□ -0.75
MCF2L2-204ENST00000459750 STAG1Q8WVM7 1258 aa10.38□□□□□ -0.75
MCF2L2-204ENST00000459750 EPSTI1Q96J88 318 aa10.38□□□□□ -0.75
MCF2L2-204ENST00000459750 TMX1Q9H3N1 280 aa10.38□□□□□ -0.75
MCF2L2-204ENST00000459750 CNNM2Q9H8M5 875 aa10.38□□□□□ -0.75
MCF2L2-204ENST00000459750 PCDHAC2Q9Y5I4 1007 aa10.38□□□□□ -0.75
MCF2L2-204ENST00000459750 UQCRHLA0A096LP55 91 aa10.38□□□□□ -0.75
MCF2L2-204ENST00000459750 UQCRHP07919 91 aa10.38□□□□□ -0.75
MCF2L2-204ENST00000459750 STX17P56962 302 aa10.38□□□□□ -0.75
MCF2L2-204ENST00000459750 AXDND1Q5T1B0 1012 aaPredicted RBP10.38□□□□□ -0.75
MCF2L2-204ENST00000459750 MTERF4Q7Z6M4 381 aaKnown RBP10.38□□□□□ -0.75
MCF2L2-204ENST00000459750 NOSTRINQ8IVI9 506 aa10.38□□□□□ -0.75
MCF2L2-204ENST00000459750 FNBP4Q8N3X1 1017 aaPredicted RBP10.38□□□□□ -0.75
MCF2L2-204ENST00000459750 CNNM3Q8NE01 707 aa10.38□□□□□ -0.75
MCF2L2-204ENST00000459750 ZNF622Q969S3 477 aaKnown RBP eCLIP10.38□□□□□ -0.75
MCF2L2-204ENST00000459750 CRNKL1Q9BZJ0 848 aaKnown RBP10.38□□□□□ -0.75
MCF2L2-204ENST00000459750 MAPK8IP1Q9UQF2 711 aa10.38□□□□□ -0.75
MCF2L2-204ENST00000459750 MYH3P11055 1940 aa10.38□□□□□ -0.75
MCF2L2-204ENST00000459750 GYS1P13807 737 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 MCM7P33993 719 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 MMP14P50281 582 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 ZNF75DP51815 510 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 EVCP57679 992 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 STX1AQ16623 288 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 MFSD14BQ5SR56 506 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 PIK3AP1Q6ZUJ8 805 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 KCNG4Q8TDN1 519 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 ZBTB9Q96C00 473 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 DHX58Q96C10 678 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 SCAF8Q9UPN6 1271 aaKnown RBP10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 G3V3G9 751 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 PRR29P0C7W0 189 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 DCAF8Q5TAQ9 597 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 SRBD1Q8N5C6 995 aaKnown RBP10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 CACTINQ8WUQ7 758 aaKnown RBP10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 RNF41Q9H4P4 317 aaPredicted RBP10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 IFNKQ9P0W0 207 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 KIAA1468Q9P260 1216 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 MYH2Q9UKX2 1941 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 VWA3AA6NCI4 1184 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 FMNL1O95466 1100 aaPredicted RBP10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 GNAT2P19087 354 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 DDR1Q08345 913 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 TCP10Q12799 353 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 DHX8Q14562 1220 aaKnown RBP10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 SLC39A14Q15043 492 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 POLLQ9UGP5 575 aa10.37□□□□□ -0.75
MCF2L2-204ENST00000459750 CENPFP49454 3210 aa10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 OFD1O75665 1012 aa10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 LIFRP42702 1097 aa10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 IQCB1Q15051 598 aa10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 UVSSAQ2YD98 709 aa10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 SGMS1Q86VZ5 419 aa10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 FOXP4Q8IVH2 680 aaPredicted RBP10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 DHX40Q8IX18 779 aaKnown RBP10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 CEP57L1Q8IYX8 460 aa10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 LTBP4Q8N2S1 1624 aa10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 UBA5Q9GZZ9 404 aa10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 SERTAD1Q9UHV2 236 aa10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 KCNH3Q9ULD8 1083 aa10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 PLEKHG2Q9H7P9 1386 aa10.36□□□□□ -0.75
MCF2L2-204ENST00000459750 USP27XA6NNY8 438 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms