RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 BIN1O00499 593 aa10.11□□□□□ -0.79
HDAC3-202ENST00000459727 ORC4O43929 436 aa10.11□□□□□ -0.79
HDAC3-202ENST00000459727 PRKCSHP14314 528 aaPredicted RBP10.11□□□□□ -0.79
HDAC3-202ENST00000459727 CALML3P27482 149 aa10.11□□□□□ -0.79
HDAC3-202ENST00000459727 LMOD1P29536 600 aaPredicted RBP10.11□□□□□ -0.79
HDAC3-202ENST00000459727 KIF5BP33176 963 aa10.11□□□□□ -0.79
HDAC3-202ENST00000459727 CTDSPL2Q05D32 466 aa10.11□□□□□ -0.79
HDAC3-202ENST00000459727 NCBP1Q09161 790 aaKnown RBP10.11□□□□□ -0.79
HDAC3-202ENST00000459727 SEC23AQ15436 765 aa10.11□□□□□ -0.79
HDAC3-202ENST00000459727 RRP12Q5JTH9 1297 aaKnown RBP10.11□□□□□ -0.79
HDAC3-202ENST00000459727 SLC10A5Q5PT55 438 aa10.11□□□□□ -0.79
HDAC3-202ENST00000459727 IFIT1BQ5T764 474 aaKnown RBP10.11□□□□□ -0.79
HDAC3-202ENST00000459727 METTL16Q86W50 562 aaKnown RBP10.11□□□□□ -0.79
HDAC3-202ENST00000459727 HELBQ8NG08 1087 aaPredicted RBP10.11□□□□□ -0.79
HDAC3-202ENST00000459727 CTCFLQ8NI51 663 aaPredicted RBP10.11□□□□□ -0.79
HDAC3-202ENST00000459727 UPF1Q92900 1129 aaKnown RBP eCLIP10.11□□□□□ -0.79
HDAC3-202ENST00000459727 PPP1R13BQ96KQ4 1090 aa10.11□□□□□ -0.79
HDAC3-202ENST00000459727 GSDMAQ96QA5 445 aa10.11□□□□□ -0.79
HDAC3-202ENST00000459727 NAA15Q9BXJ9 866 aaKnown RBP10.11□□□□□ -0.79
HDAC3-202ENST00000459727 CRNKL1Q9BZJ0 848 aaKnown RBP10.11□□□□□ -0.79
HDAC3-202ENST00000459727 L2HGDHQ9H9P8 463 aa10.11□□□□□ -0.79
HDAC3-202ENST00000459727 OGFRQ9NZT2 677 aa10.11□□□□□ -0.79
HDAC3-202ENST00000459727 RAI14Q9P0K7 980 aa10.11□□□□□ -0.79
HDAC3-202ENST00000459727 ECM29Q5VYK3 1845 aa10.11□□□□□ -0.79
HDAC3-202ENST00000459727 SCN7AQ01118 1682 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 BTBD18B2RXH4 712 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 STX10O60499 249 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 TXLNAP40222 546 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 SARSP49591 514 aaKnown RBP10.1□□□□□ -0.79
HDAC3-202ENST00000459727 GNAQP50148 359 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 BCAMP50895 628 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 PLCD1P51178 756 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 PDE4BQ07343 736 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 SPAG1Q07617 926 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 TUBB2AQ13885 445 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 MORC3Q14149 939 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 FILIP1LQ4L180 1135 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 PPP4R3BQ5MIZ7 849 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 UTP14CQ5TAP6 766 aaKnown RBP10.1□□□□□ -0.79
HDAC3-202ENST00000459727 GALNT17Q6IS24 598 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 HOMER1Q86YM7 354 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 RAB11FIP4Q86YS3 637 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 AMOTL1Q8IY63 956 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 ANKRD20A12PQ8NF67 263 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 ZNF592Q92610 1267 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 TUBB2BQ9BVA1 445 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 ARGLU1Q9NWB6 273 aaPredicted RBP10.1□□□□□ -0.79
HDAC3-202ENST00000459727 RMND1Q9NWS8 449 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 PCDHA5Q9Y5H7 936 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 SLIT2O94813 1529 aa10.1□□□□□ -0.79
HDAC3-202ENST00000459727 PPFIA3O75145 1194 aa10.09□□□□□ -0.79
HDAC3-202ENST00000459727 MYL1P05976 194 aa10.09□□□□□ -0.79
HDAC3-202ENST00000459727 SLFN14P0C7P3 912 aa10.09□□□□□ -0.79
HDAC3-202ENST00000459727 RXRAP19793 462 aa10.09□□□□□ -0.79
HDAC3-202ENST00000459727 CDK11BP21127 795 aaKnown RBP10.09□□□□□ -0.79
HDAC3-202ENST00000459727 HOXA7P31268 230 aaPredicted RBP10.09□□□□□ -0.79
HDAC3-202ENST00000459727 ETF1P62495 437 aaKnown RBP10.09□□□□□ -0.79
HDAC3-202ENST00000459727 MDM2Q00987 491 aaPredicted RBP10.09□□□□□ -0.79
HDAC3-202ENST00000459727 PNOCQ13519 176 aa10.09□□□□□ -0.79
HDAC3-202ENST00000459727 TRIM14Q14142 442 aa10.09□□□□□ -0.79
HDAC3-202ENST00000459727 LONRF3Q496Y0 759 aa10.09□□□□□ -0.79
HDAC3-202ENST00000459727 SBK1Q52WX2 424 aa10.09□□□□□ -0.79
HDAC3-202ENST00000459727 RC3H1Q5TC82 1133 aaKnown RBP10.09□□□□□ -0.79
HDAC3-202ENST00000459727 E4F1Q66K89 784 aaPredicted RBP10.09□□□□□ -0.79
HDAC3-202ENST00000459727 SPECC1LQ69YQ0 1117 aa10.09□□□□□ -0.79
HDAC3-202ENST00000459727 ARMCX5Q6P1M9 558 aa10.09□□□□□ -0.79
HDAC3-202ENST00000459727 STK11IPQ8N1F8 1099 aa10.09□□□□□ -0.79
HDAC3-202ENST00000459727 SPATA20Q8TB22 786 aa10.09□□□□□ -0.79
HDAC3-202ENST00000459727 NUP133Q8WUM0 1156 aa10.09□□□□□ -0.79
HDAC3-202ENST00000459727 CCDC51Q96ER9 411 aa10.09□□□□□ -0.79
HDAC3-202ENST00000459727 AIFM3Q96NN9 605 aa10.09□□□□□ -0.79
HDAC3-202ENST00000459727 RIOK1Q9BRS2 568 aaKnown RBP10.09□□□□□ -0.79
HDAC3-202ENST00000459727 PHF20Q9BVI0 1012 aa10.09□□□□□ -0.79
HDAC3-202ENST00000459727 TMX1Q9H3N1 280 aa10.09□□□□□ -0.79
HDAC3-202ENST00000459727 ZNF287Q9HBT7 754 aa10.09□□□□□ -0.79
HDAC3-202ENST00000459727 SEC31BQ9NQW1 1179 aa10.09□□□□□ -0.79
HDAC3-202ENST00000459727 SH3GLB2Q9NR46 395 aa10.09□□□□□ -0.79
HDAC3-202ENST00000459727 MAN1B1Q9UKM7 699 aa10.09□□□□□ -0.79
HDAC3-202ENST00000459727 COL5A3P25940 1745 aaPredicted RBP10.09□□□□□ -0.79
HDAC3-202ENST00000459727 SPATA31A5Q5VU36 1347 aa10.08□□□□□ -0.8
HDAC3-202ENST00000459727 SPATA31A7Q8IWB4 1347 aa10.08□□□□□ -0.8
HDAC3-202ENST00000459727 MINDY4BA8MYZ0 360 aa10.08□□□□□ -0.8
HDAC3-202ENST00000459727 POLR2DO15514 142 aaKnown RBP10.08□□□□□ -0.8
HDAC3-202ENST00000459727 ZNF18P17022 549 aa10.08□□□□□ -0.8
HDAC3-202ENST00000459727 GSTO1P78417 241 aa10.08□□□□□ -0.8
HDAC3-202ENST00000459727 GABPB1Q06547 395 aaPredicted RBP10.08□□□□□ -0.8
HDAC3-202ENST00000459727 SPATA1Q5VX52 437 aa10.08□□□□□ -0.8
HDAC3-202ENST00000459727 ARL6IP4Q66PJ3 421 aaKnown RBP10.08□□□□□ -0.8
HDAC3-202ENST00000459727 TMTC3Q6ZXV5 915 aa10.08□□□□□ -0.8
HDAC3-202ENST00000459727 LZTS2Q9BRK4 669 aa10.08□□□□□ -0.8
HDAC3-202ENST00000459727 MYL10Q9BUA6 226 aa10.08□□□□□ -0.8
HDAC3-202ENST00000459727 GJB4Q9NTQ9 266 aa10.08□□□□□ -0.8
HDAC3-202ENST00000459727 ABCF2Q9UG63 623 aa10.08□□□□□ -0.8
HDAC3-202ENST00000459727 DNAI1Q9UI46 699 aa10.08□□□□□ -0.8
HDAC3-202ENST00000459727 DLEC1Q9Y238 1755 aa10.08□□□□□ -0.8
HDAC3-202ENST00000459727 EP400Q96L91 3159 aa10.08□□□□□ -0.8
HDAC3-202ENST00000459727 LAD1O00515 517 aa10.07□□□□□ -0.8
HDAC3-202ENST00000459727 ACTN4O43707 911 aaKnown RBP10.07□□□□□ -0.8
HDAC3-202ENST00000459727 PRKAB2O43741 272 aa10.07□□□□□ -0.8
HDAC3-202ENST00000459727 HMGB2P26583 209 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms