RNA–Protein interactions for RNA: ENST00000459645.1

RGPD6-206, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 3

Gene RGPD6, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-206ENST00000459645 COA1Q9GZY4 146 aa5.24□□□□□ -1.57
RGPD6-206ENST00000459645 PANK3Q9H999 370 aa5.24□□□□□ -1.57
RGPD6-206ENST00000459645 PRKAG2Q9UGJ0 569 aa5.24□□□□□ -1.57
RGPD6-206ENST00000459645 RIF1Q5UIP0 2472 aaKnown RBP5.24□□□□□ -1.57
RGPD6-206ENST00000459645 MED23Q9ULK4 1368 aa5.24□□□□□ -1.57
RGPD6-206ENST00000459645 TCF20Q9UGU0 1960 aaKnown RBP5.24□□□□□ -1.57
RGPD6-206ENST00000459645 PSME4Q14997 1843 aa5.23□□□□□ -1.57
RGPD6-206ENST00000459645 FASNP49327 2511 aaKnown RBP5.23□□□□□ -1.57
RGPD6-206ENST00000459645 TRIM43BA6NCK2 446 aa5.23□□□□□ -1.57
RGPD6-206ENST00000459645 TCP10L2B9ZVM9 353 aa5.23□□□□□ -1.57
RGPD6-206ENST00000459645 IRS4O14654 1257 aaPredicted RBP5.23□□□□□ -1.57
RGPD6-206ENST00000459645 U2SURPO15042 1029 aaKnown RBP5.23□□□□□ -1.57
RGPD6-206ENST00000459645 CTAGE5O15320 804 aa5.23□□□□□ -1.57
RGPD6-206ENST00000459645 TLL1O43897 1013 aa5.23□□□□□ -1.57
RGPD6-206ENST00000459645 NPM3O75607 178 aaKnown RBP5.23□□□□□ -1.57
RGPD6-206ENST00000459645 CCDC172P0C7W6 258 aa5.23□□□□□ -1.57
RGPD6-206ENST00000459645 PRKAR2AP13861 404 aaKnown RBP5.23□□□□□ -1.57
RGPD6-206ENST00000459645 ITGB8P26012 769 aa5.23□□□□□ -1.57
RGPD6-206ENST00000459645 EIF4A1P60842 406 aaKnown RBP5.23□□□□□ -1.57
RGPD6-206ENST00000459645 AIMP1Q12904 312 aaKnown RBP5.23□□□□□ -1.57
RGPD6-206ENST00000459645 TRDNQ13061 729 aa5.23□□□□□ -1.57
RGPD6-206ENST00000459645 TAF7Q15545 349 aaPredicted RBP5.23□□□□□ -1.57
RGPD6-206ENST00000459645 COPS6Q7L5N1 327 aa5.23□□□□□ -1.57
RGPD6-206ENST00000459645 SH3RF1Q7Z6J0 888 aa5.23□□□□□ -1.57
RGPD6-206ENST00000459645 CREBRFQ8IUR6 639 aa5.23□□□□□ -1.57
RGPD6-206ENST00000459645 SMC5Q8IY18 1101 aa5.23□□□□□ -1.57
RGPD6-206ENST00000459645 MICALL1Q8N3F8 863 aa5.23□□□□□ -1.57
RGPD6-206ENST00000459645 XAGE3Q8WTP9 111 aa5.23□□□□□ -1.57
RGPD6-206ENST00000459645 TRIM43Q96BQ3 446 aaPredicted RBP5.23□□□□□ -1.57
RGPD6-206ENST00000459645 BRMS1Q9HCU9 246 aa5.23□□□□□ -1.57
RGPD6-206ENST00000459645 PRDM5Q9NQX1 630 aaPredicted RBP5.23□□□□□ -1.57
RGPD6-206ENST00000459645 ZNF70Q9UC06 446 aaPredicted RBP5.23□□□□□ -1.57
RGPD6-206ENST00000459645 KCNH4Q9UQ05 1017 aa5.23□□□□□ -1.57
RGPD6-206ENST00000459645 ATP11BQ9Y2G3 1177 aa5.23□□□□□ -1.57
RGPD6-206ENST00000459645 CACNA1HO95180 2353 aa5.23□□□□□ -1.57
RGPD6-206ENST00000459645 FLNBO75369 2602 aaKnown RBP5.23□□□□□ -1.57
RGPD6-206ENST00000459645 GVINP1Q7Z2Y8 2422 aa5.22□□□□□ -1.57
RGPD6-206ENST00000459645 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.22□□□□□ -1.57
RGPD6-206ENST00000459645 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.22□□□□□ -1.57
RGPD6-206ENST00000459645 GRXCR1A8MXD5 290 aa5.22□□□□□ -1.57
RGPD6-206ENST00000459645 ATP5J2-PTCD1G3V325 749 aa5.22□□□□□ -1.57
RGPD6-206ENST00000459645 ERC2O15083 957 aa5.22□□□□□ -1.57
RGPD6-206ENST00000459645 ZNF853P0CG23 659 aa5.22□□□□□ -1.57
RGPD6-206ENST00000459645 SETSIPP0DME0 302 aa5.22□□□□□ -1.57
RGPD6-206ENST00000459645 CCND3P30281 292 aaPredicted RBP5.22□□□□□ -1.57
RGPD6-206ENST00000459645 PRKAR2BP31323 418 aa5.22□□□□□ -1.57
RGPD6-206ENST00000459645 INPP5BP32019 993 aa5.22□□□□□ -1.57
RGPD6-206ENST00000459645 RBM5P52756 815 aaKnown RBP eCLIP5.22□□□□□ -1.57
RGPD6-206ENST00000459645 PPATQ06203 517 aa5.22□□□□□ -1.57
RGPD6-206ENST00000459645 AAK1Q2M2I8 961 aa5.22□□□□□ -1.57
RGPD6-206ENST00000459645 FOXD4L6Q3SYB3 417 aaPredicted RBP5.22□□□□□ -1.57
RGPD6-206ENST00000459645 SPDYE2Q495Y8 402 aa5.22□□□□□ -1.57
RGPD6-206ENST00000459645 HDGFL1Q5TGJ6 251 aa5.22□□□□□ -1.57
RGPD6-206ENST00000459645 KLHL10Q6JEL2 608 aa5.22□□□□□ -1.57
RGPD6-206ENST00000459645 FOXD4L3Q6VB84 417 aaPredicted RBP5.22□□□□□ -1.57
RGPD6-206ENST00000459645 COA7Q96BR5 231 aa5.22□□□□□ -1.57
RGPD6-206ENST00000459645 TDRD3Q9H7E2 651 aaKnown RBP5.22□□□□□ -1.57
RGPD6-206ENST00000459645 GJD2Q9UKL4 321 aa5.22□□□□□ -1.57
RGPD6-206ENST00000459645 ISY1Q9ULR0 285 aaKnown RBP5.22□□□□□ -1.57
RGPD6-206ENST00000459645 JAG2Q9Y219 1238 aa5.22□□□□□ -1.57
RGPD6-206ENST00000459645 MAST4O15021 2626 aa5.22□□□□□ -1.57
RGPD6-206ENST00000459645 ANKRD62A6NC57 917 aa5.21□□□□□ -1.58
RGPD6-206ENST00000459645 TRIM6-TRIM34B2RNG4 842 aa5.21□□□□□ -1.58
RGPD6-206ENST00000459645 CBFA2T2O43439 604 aa5.21□□□□□ -1.58
RGPD6-206ENST00000459645 SMARCA5O60264 1052 aaPredicted RBP5.21□□□□□ -1.58
RGPD6-206ENST00000459645 IPO7O95373 1038 aaKnown RBP5.21□□□□□ -1.58
RGPD6-206ENST00000459645 EIF2S2P20042 333 aaKnown RBP5.21□□□□□ -1.58
RGPD6-206ENST00000459645 CD151P48509 253 aa5.21□□□□□ -1.58
RGPD6-206ENST00000459645 CCT4P50991 539 aaKnown RBP5.21□□□□□ -1.58
RGPD6-206ENST00000459645 CACNB3P54284 484 aa5.21□□□□□ -1.58
RGPD6-206ENST00000459645 CACNB2Q08289 660 aaPredicted RBP5.21□□□□□ -1.58
RGPD6-206ENST00000459645 MAPK8IP2Q13387 824 aaPredicted RBP5.21□□□□□ -1.58
RGPD6-206ENST00000459645 TNFAIP1Q13829 316 aa5.21□□□□□ -1.58
RGPD6-206ENST00000459645 SKIV2LQ15477 1246 aaKnown RBP5.21□□□□□ -1.58
RGPD6-206ENST00000459645 ANKRD13CQ8N6S4 541 aa5.21□□□□□ -1.58
RGPD6-206ENST00000459645 RTF1Q92541 710 aaKnown RBP5.21□□□□□ -1.58
RGPD6-206ENST00000459645 CCDC94Q9BW85 323 aaPredicted RBP5.21□□□□□ -1.58
RGPD6-206ENST00000459645 TRIM34Q9BYJ4 488 aa5.21□□□□□ -1.58
RGPD6-206ENST00000459645 PBX4Q9BYU1 374 aa5.21□□□□□ -1.58
RGPD6-206ENST00000459645 KCNH6Q9H252 994 aa5.21□□□□□ -1.58
RGPD6-206ENST00000459645 TSPYL2Q9H2G4 693 aaPredicted RBP5.21□□□□□ -1.58
RGPD6-206ENST00000459645 METTL14Q9HCE5 456 aaKnown RBP5.21□□□□□ -1.58
RGPD6-206ENST00000459645 PDLIM7Q9NR12 457 aa5.21□□□□□ -1.58
RGPD6-206ENST00000459645 MINPP1Q9UNW1 487 aa5.21□□□□□ -1.58
RGPD6-206ENST00000459645 DAGLAQ9Y4D2 1042 aa5.21□□□□□ -1.58
RGPD6-206ENST00000459645 COMMD10Q9Y6G5 202 aa5.21□□□□□ -1.58
RGPD6-206ENST00000459645 RAD50Q92878 1312 aa5.21□□□□□ -1.58
RGPD6-206ENST00000459645 DMXL1Q9Y485 3027 aa5.2□□□□□ -1.58
RGPD6-206ENST00000459645 BICDL2A1A5D9 508 aa5.2□□□□□ -1.58
RGPD6-206ENST00000459645 GOLGA6CA6NDK9 693 aa5.2□□□□□ -1.58
RGPD6-206ENST00000459645 GOLGA6BA6NDN3 693 aa5.2□□□□□ -1.58
RGPD6-206ENST00000459645 SNAP23O00161 211 aa5.2□□□□□ -1.58
RGPD6-206ENST00000459645 DHX16O60231 1041 aaKnown RBP5.2□□□□□ -1.58
RGPD6-206ENST00000459645 GFRA3O60609 400 aa5.2□□□□□ -1.58
RGPD6-206ENST00000459645 RGS20O76081 388 aa5.2□□□□□ -1.58
RGPD6-206ENST00000459645 GOLGA6DP0CG33 693 aa5.2□□□□□ -1.58
RGPD6-206ENST00000459645 KCTD2Q14681 263 aa5.2□□□□□ -1.58
RGPD6-206ENST00000459645 TRIM60Q495X7 471 aa5.2□□□□□ -1.58
RGPD6-206ENST00000459645 ZFYVE27Q5T4F4 411 aa5.2□□□□□ -1.58
RGPD6-206ENST00000459645 MIGA2Q7L4E1 593 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms