RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 HLA-DOAP06340 250 aa28.55■■■□□ 2.16
U2AF1-204ENST00000459639 SPDYE6P0CI01 402 aa28.55■■■□□ 2.16
U2AF1-204ENST00000459639 MMP14P50281 582 aa28.55■■■□□ 2.16
U2AF1-204ENST00000459639 CPLX2Q6PUV4 134 aaKnown RBP28.55■■■□□ 2.16
U2AF1-204ENST00000459639 DDX11Q96FC9 970 aa28.55■■■□□ 2.16
U2AF1-204ENST00000459639 DHX36Q9H2U1 1008 aaKnown RBP28.55■■■□□ 2.16
U2AF1-204ENST00000459639 CDKL5O76039 1030 aa28.54■■■□□ 2.16
U2AF1-204ENST00000459639 BAG4O95429 457 aaKnown RBP28.54■■■□□ 2.16
U2AF1-204ENST00000459639 MTMR14Q8NCE2 650 aa28.54■■■□□ 2.16
U2AF1-204ENST00000459639 PRMT6Q96LA8 375 aaPredicted RBP28.54■■■□□ 2.16
U2AF1-204ENST00000459639 MYL10Q9BUA6 226 aa28.54■■■□□ 2.16
U2AF1-204ENST00000459639 EHD4Q9H223 541 aa28.54■■■□□ 2.16
U2AF1-204ENST00000459639 TDRD3Q9H7E2 651 aaKnown RBP28.54■■■□□ 2.16
U2AF1-204ENST00000459639 FAM198AQ9UFP1 575 aa28.54■■■□□ 2.16
U2AF1-204ENST00000459639 DDX11L8A8MPP1 907 aa28.54■■■□□ 2.16
U2AF1-204ENST00000459639 TSPY3P0CV98 308 aa28.54■■■□□ 2.16
U2AF1-204ENST00000459639 TSPY8P0CW00 308 aa28.54■■■□□ 2.16
U2AF1-204ENST00000459639 DLGAP5Q15398 846 aa28.54■■■□□ 2.16
U2AF1-204ENST00000459639 SWAP70Q9UH65 585 aa28.54■■■□□ 2.16
U2AF1-204ENST00000459639 SERPINB13Q9UIV8 391 aa28.54■■■□□ 2.16
U2AF1-204ENST00000459639 TAOK2Q9UL54 1235 aa28.54■■■□□ 2.16
U2AF1-204ENST00000459639 ENTPD3O75355 529 aa28.53■■■□□ 2.16
U2AF1-204ENST00000459639 RXRAP19793 462 aa28.53■■■□□ 2.16
U2AF1-204ENST00000459639 RPS12P25398 132 aaKnown RBP28.53■■■□□ 2.16
U2AF1-204ENST00000459639 PRELPP51888 382 aa28.53■■■□□ 2.16
U2AF1-204ENST00000459639 PPP2R5BQ15173 497 aa28.53■■■□□ 2.16
U2AF1-204ENST00000459639 FOXD4L5Q5VV16 416 aaPredicted RBP28.53■■■□□ 2.16
U2AF1-204ENST00000459639 FOXD4L4Q8WXT5 416 aaPredicted RBP28.53■■■□□ 2.16
U2AF1-204ENST00000459639 FZD9O00144 591 aa28.52■■■□□ 2.16
U2AF1-204ENST00000459639 F13A1P00488 732 aa28.52■■■□□ 2.16
U2AF1-204ENST00000459639 CDC27P30260 824 aa28.52■■■□□ 2.16
U2AF1-204ENST00000459639 CACNB3P54284 484 aa28.52■■■□□ 2.16
U2AF1-204ENST00000459639 CATIPQ7Z7H3 387 aa28.52■■■□□ 2.16
U2AF1-204ENST00000459639 DGKHQ86XP1 1220 aa28.52■■■□□ 2.16
U2AF1-204ENST00000459639 ANKS1AQ92625 1134 aa28.52■■■□□ 2.16
U2AF1-204ENST00000459639 FAM217BQ9NTX9 383 aaPredicted RBP28.52■■■□□ 2.16
U2AF1-204ENST00000459639 TMOD2Q9NZR1 351 aa28.52■■■□□ 2.16
U2AF1-204ENST00000459639 PLIN4Q96Q06 1357 aa28.52■■■□□ 2.16
U2AF1-204ENST00000459639 CCDC196A0A1B0GTZ2 297 aa28.51■■■□□ 2.16
U2AF1-204ENST00000459639 VPS37CA5D8V6 355 aaPredicted RBP28.51■■■□□ 2.16
U2AF1-204ENST00000459639 NMT2O60551 498 aa28.51■■■□□ 2.16
U2AF1-204ENST00000459639 DDAH1O94760 285 aa28.51■■■□□ 2.16
U2AF1-204ENST00000459639 CALM1P0DP23 149 aa28.51■■■□□ 2.16
U2AF1-204ENST00000459639 CALM2P0DP24 149 aa28.51■■■□□ 2.16
U2AF1-204ENST00000459639 CALM3P0DP25 149 aa28.51■■■□□ 2.16
U2AF1-204ENST00000459639 RTN1Q16799 776 aa28.51■■■□□ 2.16
U2AF1-204ENST00000459639 SBF1O95248 1867 aa28.51■■■□□ 2.15
U2AF1-204ENST00000459639 ATRNL1Q5VV63 1379 aa28.51■■■□□ 2.15
U2AF1-204ENST00000459639 ADD1P35611 737 aaKnown RBP28.51■■■□□ 2.15
U2AF1-204ENST00000459639 EIF6P56537 245 aaKnown RBP28.51■■■□□ 2.15
U2AF1-204ENST00000459639 RCSD1Q6JBY9 416 aa28.51■■■□□ 2.15
U2AF1-204ENST00000459639 CCDC144CPQ8IYA2 1237 aa28.51■■■□□ 2.15
U2AF1-204ENST00000459639 NEDD1Q8NHV4 660 aa28.51■■■□□ 2.15
U2AF1-204ENST00000459639 IL17RBQ9NRM6 502 aa28.51■■■□□ 2.15
U2AF1-204ENST00000459639 FDPSP14324 419 aaKnown RBP28.5■■■□□ 2.15
U2AF1-204ENST00000459639 NTRK3Q16288 839 aa28.5■■■□□ 2.15
U2AF1-204ENST00000459639 ZFPM1Q8IX07 1006 aa28.5■■■□□ 2.15
U2AF1-204ENST00000459639 FANCBQ8NB91 859 aa28.5■■■□□ 2.15
U2AF1-204ENST00000459639 GREB1LQ9C091 1923 aaPredicted RBP28.5■■■□□ 2.15
U2AF1-204ENST00000459639 GOLGA6L22H0YM25 854 aa28.49■■■□□ 2.15
U2AF1-204ENST00000459639 TCP10Q12799 353 aa28.49■■■□□ 2.15
U2AF1-204ENST00000459639 ORC3Q9UBD5 711 aaPredicted RBP28.49■■■□□ 2.15
U2AF1-204ENST00000459639 ATP6V1DQ9Y5K8 247 aa28.49■■■□□ 2.15
U2AF1-204ENST00000459639 PTMSP20962 102 aa28.48■■■□□ 2.15
U2AF1-204ENST00000459639 SPDYE2Q495Y8 402 aa28.48■■■□□ 2.15
U2AF1-204ENST00000459639 CDC37L1Q7L3B6 337 aa28.48■■■□□ 2.15
U2AF1-204ENST00000459639 NUP133Q8WUM0 1156 aa28.48■■■□□ 2.15
U2AF1-204ENST00000459639 ZBED3Q96IU2 234 aaPredicted RBP28.48■■■□□ 2.15
U2AF1-204ENST00000459639 SYT17Q9BSW7 474 aa28.48■■■□□ 2.15
U2AF1-204ENST00000459639 STK36Q9NRP7 1315 aa28.48■■■□□ 2.15
U2AF1-204ENST00000459639 TROAPQ12815 778 aa28.48■■■□□ 2.15
U2AF1-204ENST00000459639 PI4KBQ9UBF8 816 aa28.48■■■□□ 2.15
U2AF1-204ENST00000459639 ZNF70Q9UC06 446 aaPredicted RBP28.48■■■□□ 2.15
U2AF1-204ENST00000459639 MYH6P13533 1939 aa28.47■■■□□ 2.15
U2AF1-204ENST00000459639 IFNAR1P17181 557 aa28.47■■■□□ 2.15
U2AF1-204ENST00000459639 ZNF280AP59817 542 aaPredicted RBP28.47■■■□□ 2.15
U2AF1-204ENST00000459639 RGS22Q8NE09 1264 aa28.47■■■□□ 2.15
U2AF1-204ENST00000459639 RBM28Q9NW13 759 aaKnown RBP28.47■■■□□ 2.15
U2AF1-204ENST00000459639 DDTLA6NHG4 134 aaPredicted RBP28.46■■■□□ 2.15
U2AF1-204ENST00000459639 H3BQV1 296 aa28.46■■■□□ 2.15
U2AF1-204ENST00000459639 IFFO2Q5TF58 517 aa28.46■■■□□ 2.15
U2AF1-204ENST00000459639 FKBP1CQ5VVH2 108 aa28.46■■■□□ 2.15
U2AF1-204ENST00000459639 ARHGAP27Q6ZUM4 889 aa28.46■■■□□ 2.15
U2AF1-204ENST00000459639 SH3BP5LQ7L8J4 393 aa28.46■■■□□ 2.15
U2AF1-204ENST00000459639 KAT14Q9H8E8 782 aa28.46■■■□□ 2.15
U2AF1-204ENST00000459639 GOLGB1Q14789 3259 aaKnown RBP28.46■■■□□ 2.15
U2AF1-204ENST00000459639 LMNB1P20700 586 aa28.45■■■□□ 2.15
U2AF1-204ENST00000459639 SHMT1P34896 483 aa28.45■■■□□ 2.15
U2AF1-204ENST00000459639 DPF2Q92785 391 aa28.45■■■□□ 2.15
U2AF1-204ENST00000459639 MYOZ2Q9NPC6 264 aa28.45■■■□□ 2.15
U2AF1-204ENST00000459639 ZSCAN29Q8IWY8 852 aaPredicted RBP28.45■■■□□ 2.14
U2AF1-204ENST00000459639 CRACR2BQ8N4Y2 399 aaPredicted RBP28.45■■■□□ 2.14
U2AF1-204ENST00000459639 TCHHQ07283 1943 aa28.45■■■□□ 2.14
U2AF1-204ENST00000459639 MYH15Q9Y2K3 1946 aa28.45■■■□□ 2.14
U2AF1-204ENST00000459639 MYO1BO43795 1136 aa28.44■■■□□ 2.14
U2AF1-204ENST00000459639 PPFIA3O75145 1194 aa28.44■■■□□ 2.14
U2AF1-204ENST00000459639 NOVP48745 357 aa28.44■■■□□ 2.14
U2AF1-204ENST00000459639 FOXP4Q8IVH2 680 aaPredicted RBP28.44■■■□□ 2.14
U2AF1-204ENST00000459639 MAP3K14Q99558 947 aa28.44■■■□□ 2.14
U2AF1-204ENST00000459639 CLRN2A0PK11 232 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms