RNA–Protein interactions for RNA: ENST00000458283.5

PCCA-208, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-208ENST00000458283 COL9A3Q14050 684 aaPredicted RBP12.17□□□□□ -0.46
PCCA-208ENST00000458283 GIMAP6Q6P9H5 292 aa12.17□□□□□ -0.46
PCCA-208ENST00000458283 RALYLQ86SE5 291 aaKnown RBP12.17□□□□□ -0.46
PCCA-208ENST00000458283 MTMR14Q8NCE2 650 aa12.17□□□□□ -0.46
PCCA-208ENST00000458283 SLC44A5Q8NCS7 719 aa12.17□□□□□ -0.46
PCCA-208ENST00000458283 ZBED3Q96IU2 234 aaPredicted RBP12.17□□□□□ -0.46
PCCA-208ENST00000458283 KIF2CQ99661 725 aa12.17□□□□□ -0.46
PCCA-208ENST00000458283 TACC3Q9Y6A5 838 aa12.17□□□□□ -0.46
PCCA-208ENST00000458283 SIPA1L1O43166 1804 aa12.16□□□□□ -0.46
PCCA-208ENST00000458283 FAM196BA6NMK8 535 aa12.16□□□□□ -0.46
PCCA-208ENST00000458283 HLA-DOAP06340 250 aa12.16□□□□□ -0.46
PCCA-208ENST00000458283 SLURP2P0DP57 97 aa12.16□□□□□ -0.46
PCCA-208ENST00000458283 ANAPC15P60006 121 aa12.16□□□□□ -0.46
PCCA-208ENST00000458283 KRT32Q14532 448 aa12.16□□□□□ -0.46
PCCA-208ENST00000458283 CDAN1Q8IWY9 1227 aa12.16□□□□□ -0.46
PCCA-208ENST00000458283 IDI2Q9BXS1 227 aa12.16□□□□□ -0.46
PCCA-208ENST00000458283 TRIM34Q9BYJ4 488 aa12.16□□□□□ -0.46
PCCA-208ENST00000458283 TMEM39BQ9GZU3 492 aa12.16□□□□□ -0.46
PCCA-208ENST00000458283 RNF186Q9NXI6 227 aa12.16□□□□□ -0.46
PCCA-208ENST00000458283 PITPNM2Q9BZ72 1349 aa12.15□□□□□ -0.46
PCCA-208ENST00000458283 DDTLA6NHG4 134 aaPredicted RBP12.15□□□□□ -0.46
PCCA-208ENST00000458283 B4E1Z4 1266 aa12.15□□□□□ -0.46
PCCA-208ENST00000458283 SLC3A2P08195 630 aaKnown RBP12.15□□□□□ -0.46
PCCA-208ENST00000458283 PLCD1P51178 756 aa12.15□□□□□ -0.46
PCCA-208ENST00000458283 FKBP1BP68106 108 aa12.15□□□□□ -0.46
PCCA-208ENST00000458283 TTLL12Q14166 644 aaPredicted RBP12.15□□□□□ -0.46
PCCA-208ENST00000458283 RABEP1Q15276 862 aa12.15□□□□□ -0.46
PCCA-208ENST00000458283 C12orf60Q5U649 245 aa12.15□□□□□ -0.46
PCCA-208ENST00000458283 BLOC1S2Q6QNY1 142 aa12.15□□□□□ -0.46
PCCA-208ENST00000458283 SH3BP5LQ7L8J4 393 aa12.15□□□□□ -0.46
PCCA-208ENST00000458283 CHST3Q7LGC8 479 aa12.15□□□□□ -0.46
PCCA-208ENST00000458283 RASAL3Q86YV0 1011 aa12.15□□□□□ -0.46
PCCA-208ENST00000458283 STAG1Q8WVM7 1258 aa12.15□□□□□ -0.46
PCCA-208ENST00000458283 KCNB2Q92953 911 aa12.15□□□□□ -0.46
PCCA-208ENST00000458283 LRRC2Q9BYS8 371 aa12.15□□□□□ -0.46
PCCA-208ENST00000458283 ROBO3Q96MS0 1386 aa12.15□□□□□ -0.46
PCCA-208ENST00000458283 ENTPD3O75355 529 aa12.14□□□□□ -0.47
PCCA-208ENST00000458283 PSMA5P28066 241 aa12.14□□□□□ -0.47
PCCA-208ENST00000458283 NEK4P51957 841 aa12.14□□□□□ -0.47
PCCA-208ENST00000458283 TRDNQ13061 729 aa12.14□□□□□ -0.47
PCCA-208ENST00000458283 SBK1Q52WX2 424 aa12.14□□□□□ -0.47
PCCA-208ENST00000458283 AKNAD1Q5T1N1 836 aa12.14□□□□□ -0.47
PCCA-208ENST00000458283 MFSD6Q6ZSS7 791 aa12.14□□□□□ -0.47
PCCA-208ENST00000458283 PIP4P2Q8N4L2 257 aa12.14□□□□□ -0.47
PCCA-208ENST00000458283 CRACR2BQ8N4Y2 399 aaPredicted RBP12.14□□□□□ -0.47
PCCA-208ENST00000458283 NKX2-3Q8TAU0 364 aa12.14□□□□□ -0.47
PCCA-208ENST00000458283 NEK1Q96PY6 1258 aa12.14□□□□□ -0.47
PCCA-208ENST00000458283 CSRNP1Q96S65 589 aa12.14□□□□□ -0.47
PCCA-208ENST00000458283 RNF41Q9H4P4 317 aaPredicted RBP12.14□□□□□ -0.47
PCCA-208ENST00000458283 CYP46A1Q9Y6A2 500 aa12.14□□□□□ -0.47
PCCA-208ENST00000458283 MYH8P13535 1937 aa12.13□□□□□ -0.47
PCCA-208ENST00000458283 RANBP6O60518 1105 aaKnown RBP12.13□□□□□ -0.47
PCCA-208ENST00000458283 KDM4AO75164 1064 aa12.13□□□□□ -0.47
PCCA-208ENST00000458283 CD2BP2O95400 341 aaKnown RBP12.13□□□□□ -0.47
PCCA-208ENST00000458283 RPS6KB1P23443 525 aa12.13□□□□□ -0.47
PCCA-208ENST00000458283 NF2P35240 595 aa12.13□□□□□ -0.47
PCCA-208ENST00000458283 TNNI2P48788 182 aa12.13□□□□□ -0.47
PCCA-208ENST00000458283 MMP14P50281 582 aa12.13□□□□□ -0.47
PCCA-208ENST00000458283 FGD1P98174 961 aa12.13□□□□□ -0.47
PCCA-208ENST00000458283 TNFAIP1Q13829 316 aa12.13□□□□□ -0.47
PCCA-208ENST00000458283 RASA3Q14644 834 aa12.13□□□□□ -0.47
PCCA-208ENST00000458283 FAM47AQ5JRC9 791 aa12.13□□□□□ -0.47
PCCA-208ENST00000458283 TTC6Q86TZ1 520 aa12.13□□□□□ -0.47
PCCA-208ENST00000458283 APOBEC3FQ8IUX4 373 aaKnown RBP12.13□□□□□ -0.47
PCCA-208ENST00000458283 MB21D2Q8IYB1 491 aaPredicted RBP12.13□□□□□ -0.47
PCCA-208ENST00000458283 NCOA7Q8NI08 942 aa12.13□□□□□ -0.47
PCCA-208ENST00000458283 LARP6Q9BRS8 491 aaKnown RBP12.13□□□□□ -0.47
PCCA-208ENST00000458283 PDRG1Q9NUG6 133 aa12.13□□□□□ -0.47
PCCA-208ENST00000458283 ANAPC4Q9UJX5 808 aa12.13□□□□□ -0.47
PCCA-208ENST00000458283 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.13□□□□□ -0.47
PCCA-208ENST00000458283 COL2A1P02458 1487 aaPredicted RBP12.13□□□□□ -0.47
PCCA-208ENST00000458283 PRC1O43663 620 aa12.12□□□□□ -0.47
PCCA-208ENST00000458283 SLC34A2O95436 690 aa12.12□□□□□ -0.47
PCCA-208ENST00000458283 CDK8P49336 464 aa12.12□□□□□ -0.47
PCCA-208ENST00000458283 SOX10P56693 466 aa12.12□□□□□ -0.47
PCCA-208ENST00000458283 ANTXR2P58335 489 aa12.12□□□□□ -0.47
PCCA-208ENST00000458283 PDE4BQ07343 736 aa12.12□□□□□ -0.47
PCCA-208ENST00000458283 PRAMEF18Q5VWM3 479 aa12.12□□□□□ -0.47
PCCA-208ENST00000458283 C16orf86Q6ZW13 317 aa12.12□□□□□ -0.47
PCCA-208ENST00000458283 CYB5R4Q7L1T6 521 aa12.12□□□□□ -0.47
PCCA-208ENST00000458283 CTU1Q7Z7A3 348 aaKnown RBP12.12□□□□□ -0.47
PCCA-208ENST00000458283 FAM151AQ8WW52 585 aa12.12□□□□□ -0.47
PCCA-208ENST00000458283 ZKSCAN3Q9BRR0 538 aa12.12□□□□□ -0.47
PCCA-208ENST00000458283 CNNM2Q9H8M5 875 aa12.12□□□□□ -0.47
PCCA-208ENST00000458283 MKNK2Q9HBH9 465 aa12.12□□□□□ -0.47
PCCA-208ENST00000458283 GPHNQ9NQX3 736 aaPredicted RBP12.12□□□□□ -0.47
PCCA-208ENST00000458283 NAP1L2Q9ULW6 460 aaPredicted RBP12.12□□□□□ -0.47
PCCA-208ENST00000458283 ATRNL1Q5VV63 1379 aa12.12□□□□□ -0.47
PCCA-208ENST00000458283 TSPY2A6NKD2 308 aa12.11□□□□□ -0.47
PCCA-208ENST00000458283 UBE2Q2LH0YL09 131 aa12.11□□□□□ -0.47
PCCA-208ENST00000458283 MPHOSPH10O00566 681 aaKnown RBP12.11□□□□□ -0.47
PCCA-208ENST00000458283 ST18O60284 1047 aa12.11□□□□□ -0.47
PCCA-208ENST00000458283 TSGA10IPQ3SY00 556 aa12.11□□□□□ -0.47
PCCA-208ENST00000458283 MOB2Q70IA6 237 aa12.11□□□□□ -0.47
PCCA-208ENST00000458283 RUFY3Q7L099 469 aa12.11□□□□□ -0.47
PCCA-208ENST00000458283 HSCBQ8IWL3 235 aa12.11□□□□□ -0.47
PCCA-208ENST00000458283 ESR2Q92731 530 aa12.11□□□□□ -0.47
PCCA-208ENST00000458283 KRT23Q9C075 422 aa12.11□□□□□ -0.47
PCCA-208ENST00000458283 DEFB129Q9H1M3 183 aa12.11□□□□□ -0.47
PCCA-208ENST00000458283 DHX36Q9H2U1 1008 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms