RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 ZNF341Q9BYN7 854 aa10.3□□□□□ -0.76
CLTCL1-204ENST00000458188 EHD4Q9H223 541 aa10.3□□□□□ -0.76
CLTCL1-204ENST00000458188 GBA2Q9HCG7 927 aaPredicted RBP10.3□□□□□ -0.76
CLTCL1-204ENST00000458188 NEDD4P46934 1319 aa10.3□□□□□ -0.76
CLTCL1-204ENST00000458188 CASP8AP2Q9UKL3 1982 aa10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 B4E1Z4 1266 aa10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 PPP1R12BO60237 982 aaPredicted RBP10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 TBC1D12O60347 775 aa10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 RANBP6O60518 1105 aaKnown RBP10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 SLC3A2P08195 630 aaKnown RBP10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 RASA1P20936 1047 aa10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 MAP2K2P36507 400 aa10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 MAP3K9P80192 1104 aa10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 TFAP4Q01664 338 aa10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 MAP3K10Q02779 954 aa10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 MKRN3Q13064 507 aaKnown RBP10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 DGKZQ13574 1117 aa10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 TATDN1Q6P1N9 297 aa10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 METTL16Q86W50 562 aaKnown RBP10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 CLEC10AQ8IUN9 316 aa10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 C2orf69Q8N8R5 385 aa10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 CNKSR2Q8WXI2 1034 aa10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 CHMP4CQ96CF2 233 aa10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 ZKSCAN3Q9BRR0 538 aa10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 ELP3Q9H9T3 547 aa10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 HERC5Q9UII4 1024 aaKnown RBP10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 ANAPC4Q9UJX5 808 aa10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 SNX14Q9Y5W7 946 aa10.29□□□□□ -0.76
CLTCL1-204ENST00000458188 NMT2O60551 498 aa10.28□□□□□ -0.76
CLTCL1-204ENST00000458188 KDM4AO75164 1064 aa10.28□□□□□ -0.76
CLTCL1-204ENST00000458188 GH2P01242 217 aa10.28□□□□□ -0.76
CLTCL1-204ENST00000458188 PDE4BQ07343 736 aa10.28□□□□□ -0.76
CLTCL1-204ENST00000458188 RAB3GAP1Q15042 981 aa10.28□□□□□ -0.76
CLTCL1-204ENST00000458188 ABCB5Q2M3G0 1257 aa10.28□□□□□ -0.76
CLTCL1-204ENST00000458188 PRPF38BQ5VTL8 546 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-204ENST00000458188 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.28□□□□□ -0.76
CLTCL1-204ENST00000458188 CYB5R4Q7L1T6 521 aa10.28□□□□□ -0.76
CLTCL1-204ENST00000458188 ARMC9Q7Z3E5 817 aa10.28□□□□□ -0.76
CLTCL1-204ENST00000458188 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.28□□□□□ -0.76
CLTCL1-204ENST00000458188 STAG1Q8WVM7 1258 aa10.28□□□□□ -0.76
CLTCL1-204ENST00000458188 HOOK2Q96ED9 719 aa10.28□□□□□ -0.76
CLTCL1-204ENST00000458188 TCEANC2Q96MN5 208 aa10.28□□□□□ -0.76
CLTCL1-204ENST00000458188 SWAP70Q9UH65 585 aa10.28□□□□□ -0.76
CLTCL1-204ENST00000458188 TSKSQ9UJT2 592 aa10.28□□□□□ -0.76
CLTCL1-204ENST00000458188 ZNF112Q9UJU3 913 aa10.28□□□□□ -0.76
CLTCL1-204ENST00000458188 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.28□□□□□ -0.76
CLTCL1-204ENST00000458188 ZMYM6O95789 1325 aa10.28□□□□□ -0.76
CLTCL1-204ENST00000458188 TSPY2A6NKD2 308 aa10.27□□□□□ -0.77
CLTCL1-204ENST00000458188 ZKSCAN1P17029 563 aaPredicted RBP10.27□□□□□ -0.77
CLTCL1-204ENST00000458188 MCCP23508 829 aa10.27□□□□□ -0.77
CLTCL1-204ENST00000458188 CAP2P40123 477 aa10.27□□□□□ -0.77
CLTCL1-204ENST00000458188 IREB2P48200 963 aaKnown RBP10.27□□□□□ -0.77
CLTCL1-204ENST00000458188 HUNKP57058 714 aa10.27□□□□□ -0.77
CLTCL1-204ENST00000458188 ATP2B2Q01814 1243 aa10.27□□□□□ -0.77
CLTCL1-204ENST00000458188 VGLL4Q14135 290 aa10.27□□□□□ -0.77
CLTCL1-204ENST00000458188 SEPT2Q15019 361 aa10.27□□□□□ -0.77
CLTCL1-204ENST00000458188 RNF20Q5VTR2 975 aa10.27□□□□□ -0.77
CLTCL1-204ENST00000458188 CYP4F22Q6NT55 531 aa10.27□□□□□ -0.77
CLTCL1-204ENST00000458188 JAKMIP1Q96N16 626 aaKnown RBP10.27□□□□□ -0.77
CLTCL1-204ENST00000458188 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.27□□□□□ -0.77
CLTCL1-204ENST00000458188 LRRC2Q9BYS8 371 aa10.27□□□□□ -0.77
CLTCL1-204ENST00000458188 C22orf23Q9BZE7 217 aa10.27□□□□□ -0.77
CLTCL1-204ENST00000458188 RNF41Q9H4P4 317 aaPredicted RBP10.27□□□□□ -0.77
CLTCL1-204ENST00000458188 ZSWIM5Q9P217 1185 aa10.27□□□□□ -0.77
CLTCL1-204ENST00000458188 COL2A1P02458 1487 aaPredicted RBP10.26□□□□□ -0.77
CLTCL1-204ENST00000458188 CTNND1O60716 968 aaKnown RBP10.26□□□□□ -0.77
CLTCL1-204ENST00000458188 FGRP09769 529 aa10.26□□□□□ -0.77
CLTCL1-204ENST00000458188 TSPY3P0CV98 308 aa10.26□□□□□ -0.77
CLTCL1-204ENST00000458188 TSPY8P0CW00 308 aa10.26□□□□□ -0.77
CLTCL1-204ENST00000458188 GUCY1A2P33402 732 aa10.26□□□□□ -0.77
CLTCL1-204ENST00000458188 TRDNQ13061 729 aa10.26□□□□□ -0.77
CLTCL1-204ENST00000458188 LDLRAD1Q5T700 205 aa10.26□□□□□ -0.77
CLTCL1-204ENST00000458188 ANKRD13AQ8IZ07 590 aa10.26□□□□□ -0.77
CLTCL1-204ENST00000458188 SCYL3Q8IZE3 742 aa10.26□□□□□ -0.77
CLTCL1-204ENST00000458188 NCOA7Q8NI08 942 aa10.26□□□□□ -0.77
CLTCL1-204ENST00000458188 KCNB2Q92953 911 aa10.26□□□□□ -0.77
CLTCL1-204ENST00000458188 SLC10A4Q96EP9 437 aa10.26□□□□□ -0.77
CLTCL1-204ENST00000458188 NEK1Q96PY6 1258 aa10.26□□□□□ -0.77
CLTCL1-204ENST00000458188 CABP5Q9NP86 173 aa10.26□□□□□ -0.77
CLTCL1-204ENST00000458188 GPHNQ9NQX3 736 aaPredicted RBP10.26□□□□□ -0.77
CLTCL1-204ENST00000458188 IL17RBQ9NRM6 502 aa10.26□□□□□ -0.77
CLTCL1-204ENST00000458188 CSADQ9Y600 493 aa10.26□□□□□ -0.77
CLTCL1-204ENST00000458188 SNCAIPQ9Y6H5 919 aa10.26□□□□□ -0.77
CLTCL1-204ENST00000458188 ZHX2Q9Y6X8 837 aa10.26□□□□□ -0.77
CLTCL1-204ENST00000458188 ROBO3Q96MS0 1386 aa10.26□□□□□ -0.77
CLTCL1-204ENST00000458188 MYH7P12883 1935 aa10.25□□□□□ -0.77
CLTCL1-204ENST00000458188 AK9Q5TCS8 1911 aa10.25□□□□□ -0.77
CLTCL1-204ENST00000458188 ORC4O43929 436 aa10.25□□□□□ -0.77
CLTCL1-204ENST00000458188 PTPRAP18433 802 aa10.25□□□□□ -0.77
CLTCL1-204ENST00000458188 ZNF157P51786 506 aaPredicted RBP10.25□□□□□ -0.77
CLTCL1-204ENST00000458188 ANTXR2P58335 489 aa10.25□□□□□ -0.77
CLTCL1-204ENST00000458188 ZYXQ15942 572 aaKnown RBP10.25□□□□□ -0.77
CLTCL1-204ENST00000458188 MAP3K11Q16584 847 aa10.25□□□□□ -0.77
CLTCL1-204ENST00000458188 RALYLQ86SE5 291 aaKnown RBP10.25□□□□□ -0.77
CLTCL1-204ENST00000458188 SAPCD2Q86UD0 394 aa10.25□□□□□ -0.77
CLTCL1-204ENST00000458188 SIAH1Q8IUQ4 282 aa10.25□□□□□ -0.77
CLTCL1-204ENST00000458188 ACER1Q8TDN7 264 aa10.25□□□□□ -0.77
CLTCL1-204ENST00000458188 ESR2Q92731 530 aa10.25□□□□□ -0.77
CLTCL1-204ENST00000458188 OTUD5Q96G74 571 aa10.25□□□□□ -0.77
CLTCL1-204ENST00000458188 LARP6Q9BRS8 491 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms