RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 TATDN1Q6P1N9 297 aa27.82■■■□□ 2.04
CBX3-204ENST00000456948 TICAM2Q86XR7 235 aa27.82■■■□□ 2.04
CBX3-204ENST00000456948 DNAJC18Q9H819 358 aa27.82■■■□□ 2.04
CBX3-204ENST00000456948 SWAP70Q9UH65 585 aa27.82■■■□□ 2.04
CBX3-204ENST00000456948 SLC45A1Q9Y2W3 748 aa27.82■■■□□ 2.04
CBX3-204ENST00000456948 SALL3Q9BXA9 1300 aa27.82■■■□□ 2.04
CBX3-204ENST00000456948 PLCD1P51178 756 aa27.81■■■□□ 2.04
CBX3-204ENST00000456948 PABPC4Q13310 644 aaKnown RBP eCLIP27.81■■■□□ 2.04
CBX3-204ENST00000456948 KIF22Q14807 665 aa27.81■■■□□ 2.04
CBX3-204ENST00000456948 WDR18Q9BV38 432 aa27.81■■■□□ 2.04
CBX3-204ENST00000456948 PRKAB2O43741 272 aa27.8■■■□□ 2.04
CBX3-204ENST00000456948 GDF11O95390 407 aa27.8■■■□□ 2.04
CBX3-204ENST00000456948 GIMAP6Q6P9H5 292 aa27.8■■■□□ 2.04
CBX3-204ENST00000456948 PROCA1Q8NCQ7 364 aaPredicted RBP27.8■■■□□ 2.04
CBX3-204ENST00000456948 STRBPQ96SI9 672 aaKnown RBP27.8■■■□□ 2.04
CBX3-204ENST00000456948 TMOD4Q9NZQ9 345 aa27.8■■■□□ 2.04
CBX3-204ENST00000456948 ZBTB21Q9ULJ3 1066 aa27.8■■■□□ 2.04
CBX3-204ENST00000456948 NAV1Q8NEY1 1877 aa27.79■■■□□ 2.04
CBX3-204ENST00000456948 C19orf81C9J6K1 198 aa27.79■■■□□ 2.04
CBX3-204ENST00000456948 RRP1BQ14684 758 aaKnown RBP27.79■■■□□ 2.04
CBX3-204ENST00000456948 ABCB5Q2M3G0 1257 aa27.79■■■□□ 2.04
CBX3-204ENST00000456948 PNMA3Q9UL41 463 aa27.79■■■□□ 2.04
CBX3-204ENST00000456948 OSBP2Q969R2 916 aa27.78■■■□□ 2.04
CBX3-204ENST00000456948 NACAP1Q9BZK3 213 aa27.78■■■□□ 2.04
CBX3-204ENST00000456948 ARPP21Q9UBL0 812 aaPredicted RBP27.78■■■□□ 2.04
CBX3-204ENST00000456948 ATAD5Q96QE3 1844 aa27.78■■■□□ 2.04
CBX3-204ENST00000456948 SIPA1L1O43166 1804 aa27.77■■■□□ 2.04
CBX3-204ENST00000456948 USP17L12C9JPN9 530 aa27.77■■■□□ 2.04
CBX3-204ENST00000456948 USP17L21D6R901 530 aa27.77■■■□□ 2.04
CBX3-204ENST00000456948 GPAA1O43292 621 aa27.77■■■□□ 2.04
CBX3-204ENST00000456948 GH2P01242 217 aa27.77■■■□□ 2.04
CBX3-204ENST00000456948 CHGBP05060 677 aa27.77■■■□□ 2.04
CBX3-204ENST00000456948 APPP05067 770 aa27.77■■■□□ 2.04
CBX3-204ENST00000456948 MOGSQ13724 837 aa27.77■■■□□ 2.04
CBX3-204ENST00000456948 CCDC84Q86UT8 332 aaPredicted RBP27.77■■■□□ 2.04
CBX3-204ENST00000456948 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.77■■■□□ 2.04
CBX3-204ENST00000456948 AGTPBP1Q9UPW5 1226 aa27.77■■■□□ 2.04
CBX3-204ENST00000456948 TRIM6-TRIM34B2RNG4 842 aa27.76■■■□□ 2.03
CBX3-204ENST00000456948 USP17L10C9JJH3 530 aa27.76■■■□□ 2.03
CBX3-204ENST00000456948 BACE1P56817 501 aa27.76■■■□□ 2.03
CBX3-204ENST00000456948 C12orf60Q5U649 245 aa27.76■■■□□ 2.03
CBX3-204ENST00000456948 GPAT2Q6NUI2 795 aa27.76■■■□□ 2.03
CBX3-204ENST00000456948 OSBPP22059 807 aa27.75■■■□□ 2.03
CBX3-204ENST00000456948 SHMT1P34896 483 aa27.75■■■□□ 2.03
CBX3-204ENST00000456948 HMGCS2P54868 508 aa27.75■■■□□ 2.03
CBX3-204ENST00000456948 GABPAQ06546 454 aa27.75■■■□□ 2.03
CBX3-204ENST00000456948 RAB3GAP1Q15042 981 aa27.75■■■□□ 2.03
CBX3-204ENST00000456948 SH3D19Q5HYK7 790 aa27.75■■■□□ 2.03
CBX3-204ENST00000456948 SMCR8Q8TEV9 937 aaPredicted RBP27.75■■■□□ 2.03
CBX3-204ENST00000456948 EFCC1Q9HA90 598 aa27.75■■■□□ 2.03
CBX3-204ENST00000456948 TRIM17Q9Y577 477 aa27.75■■■□□ 2.03
CBX3-204ENST00000456948 PATL2C9JE40 543 aaKnown RBP27.74■■■□□ 2.03
CBX3-204ENST00000456948 MPHOSPH10O00566 681 aaKnown RBP27.74■■■□□ 2.03
CBX3-204ENST00000456948 ZMYM1Q5SVZ6 1142 aa27.74■■■□□ 2.03
CBX3-204ENST00000456948 CCDC17Q96LX7 622 aa27.74■■■□□ 2.03
CBX3-204ENST00000456948 FEZ1Q99689 392 aa27.74■■■□□ 2.03
CBX3-204ENST00000456948 OSBPL3Q9H4L5 887 aa27.74■■■□□ 2.03
CBX3-204ENST00000456948 PHIPQ8WWQ0 1821 aa27.74■■■□□ 2.03
CBX3-204ENST00000456948 TDO2P48775 406 aa27.73■■■□□ 2.03
CBX3-204ENST00000456948 MTMR2Q13614 643 aa27.73■■■□□ 2.03
CBX3-204ENST00000456948 CD99L2Q8TCZ2 262 aa27.73■■■□□ 2.03
CBX3-204ENST00000456948 ZNF287Q9HBT7 754 aa27.73■■■□□ 2.03
CBX3-204ENST00000456948 GNRH1P01148 92 aa27.72■■■□□ 2.03
CBX3-204ENST00000456948 CYP2D6P10635 497 aa27.72■■■□□ 2.03
CBX3-204ENST00000456948 USP14P54578 494 aa27.72■■■□□ 2.03
CBX3-204ENST00000456948 SBK1Q52WX2 424 aa27.72■■■□□ 2.03
CBX3-204ENST00000456948 CTR9Q6PD62 1173 aa27.72■■■□□ 2.03
CBX3-204ENST00000456948 FBXO46Q6PJ61 603 aaPredicted RBP27.72■■■□□ 2.03
CBX3-204ENST00000456948 USP17L2Q6R6M4 530 aa27.72■■■□□ 2.03
CBX3-204ENST00000456948 C17orf99Q6UX52 265 aa27.72■■■□□ 2.03
CBX3-204ENST00000456948 PLEKHM2Q8IWE5 1019 aa27.72■■■□□ 2.03
CBX3-204ENST00000456948 RILPL2Q969X0 211 aa27.72■■■□□ 2.03
CBX3-204ENST00000456948 HPS5Q9UPZ3 1129 aa27.72■■■□□ 2.03
CBX3-204ENST00000456948 GSG1L2A8MUP6 293 aa27.71■■■□□ 2.03
CBX3-204ENST00000456948 M0R2C6 588 aa27.71■■■□□ 2.03
CBX3-204ENST00000456948 TMEM179Q6ZVK1 233 aa27.71■■■□□ 2.03
CBX3-204ENST00000456948 CPA4Q9UI42 421 aa27.71■■■□□ 2.03
CBX3-204ENST00000456948 BAZ2AQ9UIF9 1905 aaKnown RBP27.71■■■□□ 2.03
CBX3-204ENST00000456948 MINDY4BA8MYZ0 360 aa27.7■■■□□ 2.02
CBX3-204ENST00000456948 CYP2C8P10632 490 aa27.7■■■□□ 2.02
CBX3-204ENST00000456948 JAG1P78504 1218 aa27.7■■■□□ 2.02
CBX3-204ENST00000456948 OTOP1Q7RTM1 612 aa27.7■■■□□ 2.02
CBX3-204ENST00000456948 HELLSQ9NRZ9 838 aa27.7■■■□□ 2.02
CBX3-204ENST00000456948 PTPRFP10586 1907 aa27.7■■■□□ 2.02
CBX3-204ENST00000456948 DDX60LQ5H9U9 1706 aaKnown RBP27.7■■■□□ 2.02
CBX3-204ENST00000456948 SLC3A2P08195 630 aaKnown RBP27.69■■■□□ 2.02
CBX3-204ENST00000456948 HOXD10P28358 340 aa27.69■■■□□ 2.02
CBX3-204ENST00000456948 CDK8P49336 464 aa27.69■■■□□ 2.02
CBX3-204ENST00000456948 LACTBP83111 547 aaPredicted RBP27.69■■■□□ 2.02
CBX3-204ENST00000456948 C16orf86Q6ZW13 317 aa27.69■■■□□ 2.02
CBX3-204ENST00000456948 DYNLL2Q96FJ2 89 aa27.69■■■□□ 2.02
CBX3-204ENST00000456948 MKNK2Q9HBH9 465 aa27.69■■■□□ 2.02
CBX3-204ENST00000456948 GCLCP48506 637 aaPredicted RBP27.68■■■□□ 2.02
CBX3-204ENST00000456948 IRX3P78415 501 aaPredicted RBP27.68■■■□□ 2.02
CBX3-204ENST00000456948 TREML2Q5T2D2 321 aa27.68■■■□□ 2.02
CBX3-204ENST00000456948 IFNL3Q8IZI9 196 aa27.68■■■□□ 2.02
CBX3-204ENST00000456948 SEC62Q99442 399 aaKnown RBP27.68■■■□□ 2.02
CBX3-204ENST00000456948 NAPBQ9H115 298 aa27.68■■■□□ 2.02
CBX3-204ENST00000456948 CYP2D7A0A087X1C5 515 aa27.67■■■□□ 2.02
CBX3-204ENST00000456948 SOX10P56693 466 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms