RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 ATRNL1Q5VV63 1379 aa8.74□□□□□ -1.01
ERCC3-204ENST00000456257 PLIN4Q96Q06 1357 aa8.74□□□□□ -1.01
ERCC3-204ENST00000456257 SCN9AQ15858 1988 aa8.74□□□□□ -1.01
ERCC3-204ENST00000456257 NFKBIEO00221 500 aa8.74□□□□□ -1.01
ERCC3-204ENST00000456257 PRPF3O43395 683 aaKnown RBP8.74□□□□□ -1.01
ERCC3-204ENST00000456257 RANBP6O60518 1105 aaKnown RBP8.74□□□□□ -1.01
ERCC3-204ENST00000456257 KCNA4P22459 653 aa8.74□□□□□ -1.01
ERCC3-204ENST00000456257 U2AF2P26368 475 aaKnown RBP eCLIP8.74□□□□□ -1.011e-7■□□□□ 8.7
ERCC3-204ENST00000456257 IARSP41252 1262 aaKnown RBP8.74□□□□□ -1.01
ERCC3-204ENST00000456257 TFAP4Q01664 338 aa8.74□□□□□ -1.01
ERCC3-204ENST00000456257 CXCL9Q07325 125 aa8.74□□□□□ -1.01
ERCC3-204ENST00000456257 CDC37L1Q7L3B6 337 aa8.74□□□□□ -1.01
ERCC3-204ENST00000456257 MAPKAPK5Q8IW41 473 aa8.74□□□□□ -1.01
ERCC3-204ENST00000456257 ZNF444Q8N0Y2 327 aaPredicted RBP8.74□□□□□ -1.01
ERCC3-204ENST00000456257 DYNLL2Q96FJ2 89 aa8.74□□□□□ -1.01
ERCC3-204ENST00000456257 CCDC17Q96LX7 622 aa8.74□□□□□ -1.01
ERCC3-204ENST00000456257 RNF26Q9BY78 433 aaPredicted RBP8.74□□□□□ -1.01
ERCC3-204ENST00000456257 OSBPL5Q9H0X9 879 aaPredicted RBP8.74□□□□□ -1.01
ERCC3-204ENST00000456257 RBM28Q9NW13 759 aaKnown RBP8.74□□□□□ -1.01
ERCC3-204ENST00000456257 FAM198AQ9UFP1 575 aa8.74□□□□□ -1.01
ERCC3-204ENST00000456257 RCOR1Q9UKL0 485 aa8.74□□□□□ -1.01
ERCC3-204ENST00000456257 MORC2Q9Y6X9 1032 aaPredicted RBP8.74□□□□□ -1.01
ERCC3-204ENST00000456257 FZD9O00144 591 aa8.73□□□□□ -1.01
ERCC3-204ENST00000456257 PSMD14O00487 310 aa8.73□□□□□ -1.01
ERCC3-204ENST00000456257 CPLX1O14810 134 aa8.73□□□□□ -1.01
ERCC3-204ENST00000456257 PRPF40AO75400 957 aaKnown RBP8.73□□□□□ -1.01
ERCC3-204ENST00000456257 POLR3DP05423 398 aaPredicted RBP8.73□□□□□ -1.01
ERCC3-204ENST00000456257 SCNN1DP51172 638 aa8.73□□□□□ -1.01
ERCC3-204ENST00000456257 ZNF280AP59817 542 aaPredicted RBP8.73□□□□□ -1.01
ERCC3-204ENST00000456257 RTN1Q16799 776 aa8.73□□□□□ -1.01
ERCC3-204ENST00000456257 RRP12Q5JTH9 1297 aaKnown RBP8.73□□□□□ -1.01
ERCC3-204ENST00000456257 IFIT1BQ5T764 474 aaKnown RBP8.73□□□□□ -1.01
ERCC3-204ENST00000456257 MCTP1Q6DN14 999 aa8.73□□□□□ -1.01
ERCC3-204ENST00000456257 NFXL1Q6ZNB6 911 aa8.73□□□□□ -1.01
ERCC3-204ENST00000456257 SH3BP5LQ7L8J4 393 aa8.73□□□□□ -1.01
ERCC3-204ENST00000456257 CATIPQ7Z7H3 387 aa8.73□□□□□ -1.01
ERCC3-204ENST00000456257 USP48Q86UV5 1035 aa8.73□□□□□ -1.01
ERCC3-204ENST00000456257 LARGE2Q8N3Y3 721 aa8.73□□□□□ -1.01
ERCC3-204ENST00000456257 FAM184AQ8NB25 1140 aa8.73□□□□□ -1.01
ERCC3-204ENST00000456257 WASF1Q92558 559 aa8.73□□□□□ -1.01
ERCC3-204ENST00000456257 DPF2Q92785 391 aa8.73□□□□□ -1.01
ERCC3-204ENST00000456257 MKL1Q969V6 931 aa8.73□□□□□ -1.01
ERCC3-204ENST00000456257 PRMT6Q96LA8 375 aaPredicted RBP8.73□□□□□ -1.01
ERCC3-204ENST00000456257 SCAND2PQ9GZW5 306 aaPredicted RBP8.73□□□□□ -1.01
ERCC3-204ENST00000456257 MKNK2Q9HBH9 465 aa8.73□□□□□ -1.01
ERCC3-204ENST00000456257 ZNF277Q9NRM2 450 aaPredicted RBP8.73□□□□□ -1.01
ERCC3-204ENST00000456257 PI4KBQ9UBF8 816 aa8.73□□□□□ -1.01
ERCC3-204ENST00000456257 PGAP2Q9UHJ9 254 aa8.73□□□□□ -1.01
ERCC3-204ENST00000456257 DDX60LQ5H9U9 1706 aaKnown RBP8.73□□□□□ -1.01
ERCC3-204ENST00000456257 COL4A5P29400 1685 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 BAZ2AQ9UIF9 1905 aaKnown RBP8.72□□□□□ -1.01
ERCC3-204ENST00000456257 PALM3A6NDB9 673 aaPredicted RBP8.72□□□□□ -1.01
ERCC3-204ENST00000456257 SPDYE2BA6NHP3 402 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 GOLGA8AA7E2F4 631 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 PRDM1O75626 825 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 DEXIO95424 95 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 MBD3O95983 291 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 SPDYE6P0CI01 402 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 RPS12P25398 132 aaKnown RBP8.72□□□□□ -1.01
ERCC3-204ENST00000456257 SHMT1P34896 483 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 GNAQP50148 359 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 DNM1Q05193 864 aaKnown RBP8.72□□□□□ -1.01
ERCC3-204ENST00000456257 SSRP1Q08945 709 aaKnown RBP8.72□□□□□ -1.01
ERCC3-204ENST00000456257 PKN1Q16512 942 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 CSPP1Q1MSJ5 1256 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 FAM47AQ5JRC9 791 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 TATDN1Q6P1N9 297 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 BRAPQ7Z569 592 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 KIAA0825Q8IV33 1275 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 ZFPM1Q8IX07 1006 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 NIM1KQ8IY84 436 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 GPT2Q8TD30 523 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 DDX11Q96FC9 970 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 C8orf76Q96K31 380 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 LZTS2Q9BRK4 669 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 ZKSCAN3Q9BRR0 538 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 MTMR4Q9NYA4 1195 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 ZNF219Q9P2Y4 722 aaPredicted RBP8.72□□□□□ -1.01
ERCC3-204ENST00000456257 SERPINB13Q9UIV8 391 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 ISY1Q9ULR0 285 aaKnown RBP8.72□□□□□ -1.01
ERCC3-204ENST00000456257 SYNPO2Q9UMS6 1093 aa8.72□□□□□ -1.01
ERCC3-204ENST00000456257 PSME4Q14997 1843 aa8.71□□□□□ -1.01
ERCC3-204ENST00000456257 BRCA1P38398 1863 aaKnown RBP8.71□□□□□ -1.01
ERCC3-204ENST00000456257 FSD2A1L4K1 749 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 TSPY2A6NKD2 308 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 TBC1D12O60347 775 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 NMT2O60551 498 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 DTNBO60941 627 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 SNHG28P0DPA3 235 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 TOP1P11387 765 aaKnown RBP8.71□□□□□ -1.02
ERCC3-204ENST00000456257 PRELPP51888 382 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 UBE2HP62256 183 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 KRT85P78386 507 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 NFIAQ12857 509 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 GSE1Q14687 1217 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 GRM4Q14833 912 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 TNIP1Q15025 636 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 CFAP100Q494V2 611 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 SPDYE2Q495Y8 402 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 PPP4R3BQ5MIZ7 849 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms