RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 PABPC4Q13310 644 aaKnown RBP eCLIP15.07■□□□□ 0
SMCR2-201ENST00000456090 MTMR2Q13614 643 aa15.07■□□□□ 0
SMCR2-201ENST00000456090 TTF1Q15361 905 aaPredicted RBP15.07■□□□□ 0
SMCR2-201ENST00000456090 MTFR1Q15390 333 aa15.07■□□□□ 0
SMCR2-201ENST00000456090 TMED8Q6PL24 325 aaPredicted RBP15.07■□□□□ 0
SMCR2-201ENST00000456090 WDR18Q9BV38 432 aa15.07■□□□□ 0
SMCR2-201ENST00000456090 GABRQQ9UN88 632 aa15.07■□□□□ 0
SMCR2-201ENST00000456090 GOLIM4O00461 696 aa15.06■□□□□ 0
SMCR2-201ENST00000456090 BACE1P56817 501 aa15.06■□□□□ 0
SMCR2-201ENST00000456090 SH3D19Q5HYK7 790 aa15.06■□□□□ 0
SMCR2-201ENST00000456090 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.06■□□□□ 0
SMCR2-201ENST00000456090 DNAJC2Q99543 621 aaKnown RBP15.06■□□□□ 0
SMCR2-201ENST00000456090 ASCC2Q9H1I8 757 aaPredicted RBP15.06■□□□□ 0
SMCR2-201ENST00000456090 BIN2Q9UBW5 565 aaPredicted RBP15.06■□□□□ 0
SMCR2-201ENST00000456090 ZBTB21Q9ULJ3 1066 aa15.06■□□□□ 0
SMCR2-201ENST00000456090 PLXNB2O15031 1838 aa15.06■□□□□ 0
SMCR2-201ENST00000456090 MAGEB6P1A0A0J9YX57 407 aa15.05■□□□□ -0
SMCR2-201ENST00000456090 TNPO2O14787 897 aaKnown RBP15.05■□□□□ -0
SMCR2-201ENST00000456090 PDE6AP16499 860 aa15.05■□□□□ -0
SMCR2-201ENST00000456090 FAM110CQ1W6H9 321 aa15.05■□□□□ -0
SMCR2-201ENST00000456090 SLC9C2Q5TAH2 1124 aa15.05■□□□□ -0
SMCR2-201ENST00000456090 RIOK1Q9BRS2 568 aaKnown RBP15.05■□□□□ -0
SMCR2-201ENST00000456090 GINM1Q9NU53 330 aa15.05■□□□□ -0
SMCR2-201ENST00000456090 TMOD4Q9NZQ9 345 aa15.05■□□□□ -0
SMCR2-201ENST00000456090 ZNF532Q9HCE3 1301 aa15.04■□□□□ -0
SMCR2-201ENST00000456090 USP17L10C9JJH3 530 aa15.04■□□□□ -0
SMCR2-201ENST00000456090 GCLCP48506 637 aaPredicted RBP15.04■□□□□ -0
SMCR2-201ENST00000456090 FLT3LGP49771 235 aa15.04■□□□□ -0
SMCR2-201ENST00000456090 PDE3AQ14432 1141 aa15.04■□□□□ -0
SMCR2-201ENST00000456090 SLAIN1Q8ND83 568 aa15.04■□□□□ -0
SMCR2-201ENST00000456090 EDC3Q96F86 508 aaKnown RBP15.04■□□□□ -0
SMCR2-201ENST00000456090 SERPINB13Q9UIV8 391 aa15.04■□□□□ -0
SMCR2-201ENST00000456090 C19orf81C9J6K1 198 aa15.03■□□□□ -0
SMCR2-201ENST00000456090 ADCY3O60266 1144 aa15.03■□□□□ -0
SMCR2-201ENST00000456090 GH2P01242 217 aa15.03■□□□□ -0
SMCR2-201ENST00000456090 CCL5P13501 91 aa15.03■□□□□ -0
SMCR2-201ENST00000456090 PLCD1P51178 756 aa15.03■□□□□ -0
SMCR2-201ENST00000456090 UBXN2AP68543 259 aa15.03■□□□□ -0
SMCR2-201ENST00000456090 IRX3P78415 501 aaPredicted RBP15.03■□□□□ -0
SMCR2-201ENST00000456090 TATDN1Q6P1N9 297 aa15.03■□□□□ -0
SMCR2-201ENST00000456090 TTC6Q86TZ1 520 aa15.03■□□□□ -0
SMCR2-201ENST00000456090 COA7Q96BR5 231 aa15.03■□□□□ -0
SMCR2-201ENST00000456090 EHD4Q9H223 541 aa15.03■□□□□ -0
SMCR2-201ENST00000456090 BOLA2Q9H3K6 86 aa15.03■□□□□ -0
SMCR2-201ENST00000456090 RANBP2P49792 3224 aaKnown RBP15.03■□□□□ -0
SMCR2-201ENST00000456090 TCRBV5S4A2TA0A5A2 114 aa15.02■□□□□ -0
SMCR2-201ENST00000456090 SLC34A2O95436 690 aa15.02■□□□□ -0
SMCR2-201ENST00000456090 ELNP15502 786 aa15.02■□□□□ -0
SMCR2-201ENST00000456090 CERKLQ49MI3 558 aaPredicted RBP15.02■□□□□ -0
SMCR2-201ENST00000456090 SHISA4Q96DD7 197 aa15.02■□□□□ -0
SMCR2-201ENST00000456090 CRNKL1Q9BZJ0 848 aaKnown RBP15.02■□□□□ -0
SMCR2-201ENST00000456090 RNF208Q9H0X6 261 aa15.02■□□□□ -0
SMCR2-201ENST00000456090 PAG1Q9NWQ8 432 aa15.02■□□□□ -0
SMCR2-201ENST00000456090 TAOK2Q9UL54 1235 aa15.02■□□□□ -0
SMCR2-201ENST00000456090 POLR3DP05423 398 aaPredicted RBP15.01□□□□□ -0.01
SMCR2-201ENST00000456090 ATP5JP18859 108 aa15.01□□□□□ -0.01
SMCR2-201ENST00000456090 HOXA7P31268 230 aaPredicted RBP15.01□□□□□ -0.01
SMCR2-201ENST00000456090 IRF5Q13568 498 aa15.01□□□□□ -0.01
SMCR2-201ENST00000456090 RAB3GAP1Q15042 981 aa15.01□□□□□ -0.01
SMCR2-201ENST00000456090 LCORLQ8N3X6 602 aa15.01□□□□□ -0.01
SMCR2-201ENST00000456090 PXYLP1Q8TE99 480 aa15.01□□□□□ -0.01
SMCR2-201ENST00000456090 SDR42E1Q8WUS8 393 aa15.01□□□□□ -0.01
SMCR2-201ENST00000456090 P2RX7Q99572 595 aaKnown RBP15.01□□□□□ -0.01
SMCR2-201ENST00000456090 LRRCC1Q9C099 1032 aa15.01□□□□□ -0.01
SMCR2-201ENST00000456090 EMILIN3Q9NT22 766 aa15.01□□□□□ -0.01
SMCR2-201ENST00000456090 MCM9Q9NXL9 1143 aa15.01□□□□□ -0.01
SMCR2-201ENST00000456090 SZT2Q5T011 3432 aa15.01□□□□□ -0.01
SMCR2-201ENST00000456090 SMARCA5O60264 1052 aaPredicted RBP15□□□□□ -0.01
SMCR2-201ENST00000456090 INHAP05111 366 aa15□□□□□ -0.01
SMCR2-201ENST00000456090 GJB1P08034 283 aa15□□□□□ -0.01
SMCR2-201ENST00000456090 SHMT1P34896 483 aa15□□□□□ -0.01
SMCR2-201ENST00000456090 HERVK_113P62684 666 aa15□□□□□ -0.01
SMCR2-201ENST00000456090 ZYXQ15942 572 aaKnown RBP15□□□□□ -0.01
SMCR2-201ENST00000456090 ABCB5Q2M3G0 1257 aa15□□□□□ -0.01
SMCR2-201ENST00000456090 SLFNL1Q499Z3 407 aa15□□□□□ -0.01
SMCR2-201ENST00000456090 NKX2-3Q8TAU0 364 aa15□□□□□ -0.01
SMCR2-201ENST00000456090 FEZ1Q99689 392 aa15□□□□□ -0.01
SMCR2-201ENST00000456090 HAUS7Q99871 368 aa15□□□□□ -0.01
SMCR2-201ENST00000456090 UNC93B1Q9H1C4 597 aa15□□□□□ -0.01
SMCR2-201ENST00000456090 PEX10O60683 326 aa14.99□□□□□ -0.01
SMCR2-201ENST00000456090 ADD2P35612 726 aa14.99□□□□□ -0.01
SMCR2-201ENST00000456090 GJA8P48165 433 aa14.99□□□□□ -0.01
SMCR2-201ENST00000456090 EVX2Q03828 476 aa14.99□□□□□ -0.01
SMCR2-201ENST00000456090 USP17L2Q6R6M4 530 aa14.99□□□□□ -0.01
SMCR2-201ENST00000456090 ARMT1Q9H993 441 aa14.99□□□□□ -0.01
SMCR2-201ENST00000456090 CABP5Q9NP86 173 aa14.99□□□□□ -0.01
SMCR2-201ENST00000456090 DCP1AQ9NPI6 582 aaPredicted RBP14.99□□□□□ -0.01
SMCR2-201ENST00000456090 MORF4L1Q9UBU8 362 aa14.99□□□□□ -0.01
SMCR2-201ENST00000456090 DNAH12Q6ZR08 3092 aa14.98□□□□□ -0.01
SMCR2-201ENST00000456090 GABPAQ06546 454 aa14.98□□□□□ -0.01
SMCR2-201ENST00000456090 GPRC5AQ8NFJ5 357 aa14.98□□□□□ -0.01
SMCR2-201ENST00000456090 U2AF1L4Q8WU68 220 aaKnown RBP14.98□□□□□ -0.01
SMCR2-201ENST00000456090 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.98□□□□□ -0.01
SMCR2-201ENST00000456090 TXNRD2Q9NNW7 524 aa14.98□□□□□ -0.01
SMCR2-201ENST00000456090 PARP14Q460N5 1801 aa14.97□□□□□ -0.01
SMCR2-201ENST00000456090 MBD4O95243 580 aa14.97□□□□□ -0.01
SMCR2-201ENST00000456090 CHGBP05060 677 aa14.97□□□□□ -0.01
SMCR2-201ENST00000456090 ACER1Q8TDN7 264 aa14.97□□□□□ -0.01
SMCR2-201ENST00000456090 GCC1Q96CN9 775 aa14.97□□□□□ -0.01
SMCR2-201ENST00000456090 C12orf42Q96LP6 360 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms