RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 ZNF280CQ8ND82 737 aa19.54■□□□□ 0.72
SMPD4-214ENST00000455548 OSBP2Q969R2 916 aa19.54■□□□□ 0.72
SMPD4-214ENST00000455548 STRBPQ96SI9 672 aaKnown RBP19.54■□□□□ 0.72
SMPD4-214ENST00000455548 MYH8P13535 1937 aa19.53■□□□□ 0.72
SMPD4-214ENST00000455548 PDHXO00330 501 aa19.53■□□□□ 0.72
SMPD4-214ENST00000455548 GDF11O95390 407 aa19.53■□□□□ 0.72
SMPD4-214ENST00000455548 GABPAQ06546 454 aa19.53■□□□□ 0.72
SMPD4-214ENST00000455548 SPP2Q13103 211 aa19.53■□□□□ 0.72
SMPD4-214ENST00000455548 EVI5LQ96CN4 794 aa19.53■□□□□ 0.72
SMPD4-214ENST00000455548 WDR18Q9BV38 432 aa19.53■□□□□ 0.72
SMPD4-214ENST00000455548 MCOLN1Q9GZU1 580 aa19.53■□□□□ 0.72
SMPD4-214ENST00000455548 ZBTB21Q9ULJ3 1066 aa19.53■□□□□ 0.72
SMPD4-214ENST00000455548 TLR2O60603 784 aa19.52■□□□□ 0.72
SMPD4-214ENST00000455548 GNAT2P19087 354 aa19.52■□□□□ 0.72
SMPD4-214ENST00000455548 CERKLQ49MI3 558 aaPredicted RBP19.52■□□□□ 0.72
SMPD4-214ENST00000455548 GPAT2Q6NUI2 795 aa19.52■□□□□ 0.72
SMPD4-214ENST00000455548 GIMAP6Q6P9H5 292 aa19.52■□□□□ 0.72
SMPD4-214ENST00000455548 TICAM2Q86XR7 235 aa19.52■□□□□ 0.72
SMPD4-214ENST00000455548 PROCA1Q8NCQ7 364 aaPredicted RBP19.52■□□□□ 0.72
SMPD4-214ENST00000455548 ERO1AQ96HE7 468 aa19.52■□□□□ 0.72
SMPD4-214ENST00000455548 LOC285556D6RIA3 1793 aa19.52■□□□□ 0.71
SMPD4-214ENST00000455548 GPAA1O43292 621 aa19.51■□□□□ 0.71
SMPD4-214ENST00000455548 SHMT1P34896 483 aa19.51■□□□□ 0.71
SMPD4-214ENST00000455548 JAG1P78504 1218 aa19.51■□□□□ 0.71
SMPD4-214ENST00000455548 SP3Q02447 781 aa19.51■□□□□ 0.71
SMPD4-214ENST00000455548 CABP5Q9NP86 173 aa19.51■□□□□ 0.71
SMPD4-214ENST00000455548 SWAP70Q9UH65 585 aa19.51■□□□□ 0.71
SMPD4-214ENST00000455548 SLC45A1Q9Y2W3 748 aa19.51■□□□□ 0.71
SMPD4-214ENST00000455548 USP17L12C9JPN9 530 aa19.5■□□□□ 0.71
SMPD4-214ENST00000455548 USP17L21D6R901 530 aa19.5■□□□□ 0.71
SMPD4-214ENST00000455548 GH2P01242 217 aa19.5■□□□□ 0.71
SMPD4-214ENST00000455548 CYP2D6P10635 497 aa19.5■□□□□ 0.71
SMPD4-214ENST00000455548 PKN2Q16513 984 aaKnown RBP19.5■□□□□ 0.71
SMPD4-214ENST00000455548 ABCB5Q2M3G0 1257 aa19.5■□□□□ 0.71
SMPD4-214ENST00000455548 ZMYM1Q5SVZ6 1142 aa19.5■□□□□ 0.71
SMPD4-214ENST00000455548 C12orf60Q5U649 245 aa19.5■□□□□ 0.71
SMPD4-214ENST00000455548 PLEKHM2Q8IWE5 1019 aa19.5■□□□□ 0.71
SMPD4-214ENST00000455548 PARK7Q99497 189 aaKnown RBP19.5■□□□□ 0.71
SMPD4-214ENST00000455548 OSBPL3Q9H4L5 887 aa19.5■□□□□ 0.71
SMPD4-214ENST00000455548 HMGCS2P54868 508 aa19.49■□□□□ 0.71
SMPD4-214ENST00000455548 ARHGEF6Q15052 776 aa19.49■□□□□ 0.71
SMPD4-214ENST00000455548 SH3D19Q5HYK7 790 aa19.49■□□□□ 0.71
SMPD4-214ENST00000455548 ABHD8Q96I13 439 aa19.49■□□□□ 0.71
SMPD4-214ENST00000455548 ARPP21Q9UBL0 812 aaPredicted RBP19.49■□□□□ 0.71
SMPD4-214ENST00000455548 AGTPBP1Q9UPW5 1226 aa19.49■□□□□ 0.71
SMPD4-214ENST00000455548 GSG1L2A8MUP6 293 aa19.48■□□□□ 0.71
SMPD4-214ENST00000455548 C19orf81C9J6K1 198 aa19.48■□□□□ 0.71
SMPD4-214ENST00000455548 USP17L10C9JJH3 530 aa19.48■□□□□ 0.71
SMPD4-214ENST00000455548 M0R2C6 588 aa19.48■□□□□ 0.71
SMPD4-214ENST00000455548 BACE1P56817 501 aa19.48■□□□□ 0.71
SMPD4-214ENST00000455548 PABPC4Q13310 644 aaKnown RBP eCLIP19.48■□□□□ 0.71
SMPD4-214ENST00000455548 SHROOM1Q2M3G4 852 aaPredicted RBP19.48■□□□□ 0.71
SMPD4-214ENST00000455548 SBK1Q52WX2 424 aa19.48■□□□□ 0.71
SMPD4-214ENST00000455548 CTR9Q6PD62 1173 aa19.48■□□□□ 0.71
SMPD4-214ENST00000455548 CD99L2Q8TCZ2 262 aa19.48■□□□□ 0.71
SMPD4-214ENST00000455548 TRIM6-TRIM34B2RNG4 842 aa19.47■□□□□ 0.71
SMPD4-214ENST00000455548 EVX2Q03828 476 aa19.47■□□□□ 0.71
SMPD4-214ENST00000455548 MTMR2Q13614 643 aa19.47■□□□□ 0.71
SMPD4-214ENST00000455548 RAB3GAP1Q15042 981 aa19.47■□□□□ 0.71
SMPD4-214ENST00000455548 C17orf99Q6UX52 265 aa19.47■□□□□ 0.71
SMPD4-214ENST00000455548 C16orf86Q6ZW13 317 aa19.47■□□□□ 0.71
SMPD4-214ENST00000455548 DYNLL2Q96FJ2 89 aa19.47■□□□□ 0.71
SMPD4-214ENST00000455548 TMOD4Q9NZQ9 345 aa19.47■□□□□ 0.71
SMPD4-214ENST00000455548 PNMA3Q9UL41 463 aa19.47■□□□□ 0.71
SMPD4-214ENST00000455548 ADGRA2Q96PE1 1338 aa19.47■□□□□ 0.71
SMPD4-214ENST00000455548 CYP2D7A0A087X1C5 515 aa19.46■□□□□ 0.71
SMPD4-214ENST00000455548 PATL2C9JE40 543 aaKnown RBP19.46■□□□□ 0.71
SMPD4-214ENST00000455548 APPP05067 770 aa19.46■□□□□ 0.71
SMPD4-214ENST00000455548 KIF22Q14807 665 aa19.46■□□□□ 0.71
SMPD4-214ENST00000455548 SEC62Q99442 399 aaKnown RBP19.46■□□□□ 0.71
SMPD4-214ENST00000455548 NACAP1Q9BZK3 213 aa19.46■□□□□ 0.71
SMPD4-214ENST00000455548 EFCC1Q9HA90 598 aa19.46■□□□□ 0.71
SMPD4-214ENST00000455548 MPHOSPH10O00566 681 aaKnown RBP19.45■□□□□ 0.7
SMPD4-214ENST00000455548 TDO2P48775 406 aa19.45■□□□□ 0.7
SMPD4-214ENST00000455548 CDK8P49336 464 aa19.45■□□□□ 0.7
SMPD4-214ENST00000455548 TREML2Q5T2D2 321 aa19.45■□□□□ 0.7
SMPD4-214ENST00000455548 FBXO46Q6PJ61 603 aaPredicted RBP19.45■□□□□ 0.7
SMPD4-214ENST00000455548 OTOP1Q7RTM1 612 aa19.45■□□□□ 0.7
SMPD4-214ENST00000455548 SLC44A5Q8NCS7 719 aa19.45■□□□□ 0.7
SMPD4-214ENST00000455548 RILPL2Q969X0 211 aa19.45■□□□□ 0.7
SMPD4-214ENST00000455548 CCDC17Q96LX7 622 aa19.45■□□□□ 0.7
SMPD4-214ENST00000455548 HELLSQ9NRZ9 838 aa19.45■□□□□ 0.7
SMPD4-214ENST00000455548 CPA4Q9UI42 421 aa19.45■□□□□ 0.7
SMPD4-214ENST00000455548 TRIM17Q9Y577 477 aa19.45■□□□□ 0.7
SMPD4-214ENST00000455548 CYP2C8P10632 490 aa19.44■□□□□ 0.7
SMPD4-214ENST00000455548 USP17L2Q6R6M4 530 aa19.44■□□□□ 0.7
SMPD4-214ENST00000455548 TMEM179Q6ZVK1 233 aa19.44■□□□□ 0.7
SMPD4-214ENST00000455548 SMCR8Q8TEV9 937 aaPredicted RBP19.44■□□□□ 0.7
SMPD4-214ENST00000455548 FEZ1Q99689 392 aa19.44■□□□□ 0.7
SMPD4-214ENST00000455548 EPB41L4AQ9HCS5 686 aaPredicted RBP19.44■□□□□ 0.7
SMPD4-214ENST00000455548 ROBO3Q96MS0 1386 aa19.44■□□□□ 0.7
SMPD4-214ENST00000455548 CAPN15O75808 1086 aa19.43■□□□□ 0.7
SMPD4-214ENST00000455548 BCRP11274 1271 aa19.43■□□□□ 0.7
SMPD4-214ENST00000455548 OSBPP22059 807 aa19.43■□□□□ 0.7
SMPD4-214ENST00000455548 USP14P54578 494 aa19.43■□□□□ 0.7
SMPD4-214ENST00000455548 LACTBP83111 547 aaPredicted RBP19.43■□□□□ 0.7
SMPD4-214ENST00000455548 SEPT2Q15019 361 aa19.43■□□□□ 0.7
SMPD4-214ENST00000455548 MINDY4BA8MYZ0 360 aa19.42■□□□□ 0.7
SMPD4-214ENST00000455548 HOXA7P31268 230 aaPredicted RBP19.42■□□□□ 0.7
SMPD4-214ENST00000455548 GUCY1A2P33402 732 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms