RNA–Protein interactions for RNA: ENST00000455302.5

LSMEM1-203, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 2

Gene LSMEM1, Length 819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-203ENST00000455302 CCDC85CA6NKD9 419 aa9.08□□□□□ -0.96
LSMEM1-203ENST00000455302 H7C1W4 665 aa9.08□□□□□ -0.96
LSMEM1-203ENST00000455302 NFKBIEO00221 500 aa9.08□□□□□ -0.96
LSMEM1-203ENST00000455302 MAN1A2O60476 641 aa9.08□□□□□ -0.96
LSMEM1-203ENST00000455302 GADD45BO75293 160 aaPredicted RBP9.08□□□□□ -0.96
LSMEM1-203ENST00000455302 HSP90AB1P08238 724 aaKnown RBP9.08□□□□□ -0.96
LSMEM1-203ENST00000455302 BMP1P13497 986 aa9.08□□□□□ -0.96
LSMEM1-203ENST00000455302 CES1P23141 567 aa9.08□□□□□ -0.96
LSMEM1-203ENST00000455302 TM4SF1P30408 202 aa9.08□□□□□ -0.96
LSMEM1-203ENST00000455302 USPL1Q5W0Q7 1092 aa9.08□□□□□ -0.96
LSMEM1-203ENST00000455302 TRIM46Q7Z4K8 759 aa9.08□□□□□ -0.96
LSMEM1-203ENST00000455302 C2CD5Q86YS7 1000 aa9.08□□□□□ -0.96
LSMEM1-203ENST00000455302 TESK2Q96S53 571 aa9.08□□□□□ -0.96
LSMEM1-203ENST00000455302 EFCC1Q9HA90 598 aa9.08□□□□□ -0.96
LSMEM1-203ENST00000455302 H0YIN7 160 aa9.07□□□□□ -0.96
LSMEM1-203ENST00000455302 FAM157BP0CG42 384 aa9.07□□□□□ -0.96
LSMEM1-203ENST00000455302 HSPA8P11142 646 aaKnown RBP9.07□□□□□ -0.96
LSMEM1-203ENST00000455302 LAMC2Q13753 1193 aa9.07□□□□□ -0.96
LSMEM1-203ENST00000455302 TAF1CQ15572 869 aaPredicted RBP9.07□□□□□ -0.96
LSMEM1-203ENST00000455302 C1orf127Q8N9H9 656 aa9.07□□□□□ -0.96
LSMEM1-203ENST00000455302 PCDHGC4Q9Y5F7 938 aa9.07□□□□□ -0.96
LSMEM1-203ENST00000455302 WASHC2AQ641Q2 1341 aa9.06□□□□□ -0.96
LSMEM1-203ENST00000455302 ATXN7O15265 892 aaPredicted RBP9.06□□□□□ -0.96
LSMEM1-203ENST00000455302 DDNO94850 711 aaPredicted RBP9.06□□□□□ -0.96
LSMEM1-203ENST00000455302 CTSHP09668 335 aa9.06□□□□□ -0.96
LSMEM1-203ENST00000455302 EDN3P14138 238 aa9.06□□□□□ -0.96
LSMEM1-203ENST00000455302 ST13P50502 369 aaKnown RBP9.06□□□□□ -0.96
LSMEM1-203ENST00000455302 RAD51AP2Q09MP3 1159 aa9.06□□□□□ -0.96
LSMEM1-203ENST00000455302 CCINQ13939 588 aa9.06□□□□□ -0.96
LSMEM1-203ENST00000455302 HS2ST1Q7LGA3 356 aa9.06□□□□□ -0.96
LSMEM1-203ENST00000455302 LDHDQ86WU2 507 aa9.06□□□□□ -0.96
LSMEM1-203ENST00000455302 CRIPAKQ8N1N5 446 aa9.06□□□□□ -0.96
LSMEM1-203ENST00000455302 OSBPL7Q9BZF2 842 aa9.06□□□□□ -0.96
LSMEM1-203ENST00000455302 ZCCHC2Q9C0B9 1178 aaKnown RBP9.06□□□□□ -0.96
LSMEM1-203ENST00000455302 NPHS2Q9NP85 383 aa9.06□□□□□ -0.96
LSMEM1-203ENST00000455302 DNMT3LQ9UJW3 386 aa9.06□□□□□ -0.96
LSMEM1-203ENST00000455302 PASKQ96RG2 1323 aa9.05□□□□□ -0.96
LSMEM1-203ENST00000455302 IQCA1LA6NCM1 817 aa9.05□□□□□ -0.96
LSMEM1-203ENST00000455302 PHF20L1A8MW92 1017 aa9.05□□□□□ -0.96
LSMEM1-203ENST00000455302 GFRA3O60609 400 aa9.05□□□□□ -0.96
LSMEM1-203ENST00000455302 SERPINB2P05120 415 aa9.05□□□□□ -0.96
LSMEM1-203ENST00000455302 GRNP28799 593 aaKnown RBP9.05□□□□□ -0.96
LSMEM1-203ENST00000455302 MAP2K1Q02750 393 aaPredicted RBP9.05□□□□□ -0.96
LSMEM1-203ENST00000455302 NFIXQ14938 502 aa9.05□□□□□ -0.96
LSMEM1-203ENST00000455302 PLEKHO1Q53GL0 409 aaPredicted RBP9.05□□□□□ -0.96
LSMEM1-203ENST00000455302 ZNF530Q6P9A1 599 aaPredicted RBP9.05□□□□□ -0.96
LSMEM1-203ENST00000455302 ZNF654Q8IZM8 581 aa9.05□□□□□ -0.96
LSMEM1-203ENST00000455302 SLC43A3Q8NBI5 491 aa9.05□□□□□ -0.96
LSMEM1-203ENST00000455302 UBXN4Q92575 508 aa9.05□□□□□ -0.96
LSMEM1-203ENST00000455302 ZNF622Q969S3 477 aaKnown RBP eCLIP9.05□□□□□ -0.96
LSMEM1-203ENST00000455302 BCO2Q9BYV7 579 aa9.05□□□□□ -0.96
LSMEM1-203ENST00000455302 CHRDQ9H2X0 955 aa9.05□□□□□ -0.96
LSMEM1-203ENST00000455302 SUV39H2Q9H5I1 410 aa9.05□□□□□ -0.96
LSMEM1-203ENST00000455302 CNTN3Q9P232 1028 aa9.05□□□□□ -0.96
LSMEM1-203ENST00000455302 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.05□□□□□ -0.96
LSMEM1-203ENST00000455302 EREGO14944 169 aa9.04□□□□□ -0.96
LSMEM1-203ENST00000455302 POLR3DP05423 398 aaPredicted RBP9.04□□□□□ -0.96
LSMEM1-203ENST00000455302 IRS1P35568 1242 aa9.04□□□□□ -0.96
LSMEM1-203ENST00000455302 MTHFSP49914 203 aa9.04□□□□□ -0.96
LSMEM1-203ENST00000455302 KIAA0319Q5VV43 1072 aa9.04□□□□□ -0.96
LSMEM1-203ENST00000455302 INTS5Q6P9B9 1019 aaKnown RBP9.04□□□□□ -0.96
LSMEM1-203ENST00000455302 PI16Q6UXB8 463 aa9.04□□□□□ -0.96
LSMEM1-203ENST00000455302 RIPOR1Q6ZS17 1223 aa9.04□□□□□ -0.96
LSMEM1-203ENST00000455302 PNMA5Q96PV4 448 aa9.04□□□□□ -0.96
LSMEM1-203ENST00000455302 TAOK3Q9H2K8 898 aa9.04□□□□□ -0.96
LSMEM1-203ENST00000455302 TIAM2Q8IVF5 1701 aa9.04□□□□□ -0.96
LSMEM1-203ENST00000455302 COL5A3P25940 1745 aaPredicted RBP9.03□□□□□ -0.96
LSMEM1-203ENST00000455302 SASH3O75995 380 aa9.03□□□□□ -0.96
LSMEM1-203ENST00000455302 USP17L7P0C7H9 530 aa9.03□□□□□ -0.96
LSMEM1-203ENST00000455302 GSTT1P30711 240 aa9.03□□□□□ -0.96
LSMEM1-203ENST00000455302 RGS19P49795 217 aa9.03□□□□□ -0.96
LSMEM1-203ENST00000455302 PTPN12Q05209 780 aaKnown RBP9.03□□□□□ -0.96
LSMEM1-203ENST00000455302 EIF4A2Q14240 407 aaKnown RBP9.03□□□□□ -0.96
LSMEM1-203ENST00000455302 DEFB115Q30KQ5 88 aa9.03□□□□□ -0.96
LSMEM1-203ENST00000455302 C1orf141Q5JVX7 400 aa9.03□□□□□ -0.96
LSMEM1-203ENST00000455302 NXPE4Q6UWF7 544 aa9.03□□□□□ -0.96
LSMEM1-203ENST00000455302 GMCL1Q96IK5 515 aa9.03□□□□□ -0.96
LSMEM1-203ENST00000455302 CAPN10Q9HC96 672 aa9.03□□□□□ -0.96
LSMEM1-203ENST00000455302 NARFQ9UHQ1 456 aa9.03□□□□□ -0.96
LSMEM1-203ENST00000455302 ZNF831Q5JPB2 1677 aa9.03□□□□□ -0.96
LSMEM1-203ENST00000455302 SOS1Q07889 1333 aaPredicted RBP9.03□□□□□ -0.96
LSMEM1-203ENST00000455302 WDR33Q9C0J8 1336 aaKnown RBP9.03□□□□□ -0.96
LSMEM1-203ENST00000455302 SBF1O95248 1867 aa9.02□□□□□ -0.96
LSMEM1-203ENST00000455302 CARMIL3Q8ND23 1372 aa9.02□□□□□ -0.97
LSMEM1-203ENST00000455302 RASSF10A6NK89 507 aa9.02□□□□□ -0.97
LSMEM1-203ENST00000455302 LCE2BO14633 110 aa9.02□□□□□ -0.97
LSMEM1-203ENST00000455302 KHNYNO15037 678 aaKnown RBP9.02□□□□□ -0.97
LSMEM1-203ENST00000455302 AMOTQ4VCS5 1084 aa9.02□□□□□ -0.97
LSMEM1-203ENST00000455302 Q6ZNB5 142 aa9.02□□□□□ -0.97
LSMEM1-203ENST00000455302 DNAJC10Q8IXB1 793 aa9.02□□□□□ -0.97
LSMEM1-203ENST00000455302 OR13H1Q8NG92 308 aa9.02□□□□□ -0.97
LSMEM1-203ENST00000455302 GSX2Q9BZM3 304 aa9.02□□□□□ -0.97
LSMEM1-203ENST00000455302 NUCKS1Q9H1E3 243 aaKnown RBP9.02□□□□□ -0.97
LSMEM1-203ENST00000455302 EHD4Q9H223 541 aa9.02□□□□□ -0.97
LSMEM1-203ENST00000455302 TAF1DQ9H5J8 278 aaPredicted RBP9.02□□□□□ -0.97
LSMEM1-203ENST00000455302 ZFYVE1Q9HBF4 777 aa9.02□□□□□ -0.97
LSMEM1-203ENST00000455302 GGT7Q9UJ14 662 aa9.02□□□□□ -0.97
LSMEM1-203ENST00000455302 ABT1Q9ULW3 272 aaKnown RBP9.02□□□□□ -0.97
LSMEM1-203ENST00000455302 COL15A1P39059 1388 aa9.01□□□□□ -0.97
LSMEM1-203ENST00000455302 EFSO43281 561 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms