RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 ZNF444Q8N0Y2 327 aaPredicted RBP19.59■□□□□ 0.73
CCDC90B-202ENST00000455220 CDCA5Q96FF9 252 aa19.59■□□□□ 0.73
CCDC90B-202ENST00000455220 ZSWIM5Q9P217 1185 aa19.59■□□□□ 0.73
CCDC90B-202ENST00000455220 GREB1LQ9C091 1923 aaPredicted RBP19.59■□□□□ 0.73
CCDC90B-202ENST00000455220 KIF3CO14782 793 aa19.58■□□□□ 0.73
CCDC90B-202ENST00000455220 RANBP6O60518 1105 aaKnown RBP19.58■□□□□ 0.73
CCDC90B-202ENST00000455220 DLK2Q6UY11 383 aa19.58■□□□□ 0.73
CCDC90B-202ENST00000455220 CYB5R4Q7L1T6 521 aa19.58■□□□□ 0.73
CCDC90B-202ENST00000455220 CCDC17Q96LX7 622 aa19.58■□□□□ 0.73
CCDC90B-202ENST00000455220 MTA3Q9BTC8 594 aa19.58■□□□□ 0.73
CCDC90B-202ENST00000455220 PHF20L1A8MW92 1017 aa19.57■□□□□ 0.72
CCDC90B-202ENST00000455220 CHADLQ6NUI6 762 aa19.57■□□□□ 0.72
CCDC90B-202ENST00000455220 NEDD1Q8NHV4 660 aa19.57■□□□□ 0.72
CCDC90B-202ENST00000455220 TTC14Q96N46 770 aa19.57■□□□□ 0.72
CCDC90B-202ENST00000455220 TSPY2A6NKD2 308 aa19.57■□□□□ 0.72
CCDC90B-202ENST00000455220 PRC1O43663 620 aa19.57■□□□□ 0.72
CCDC90B-202ENST00000455220 AKR1B1P15121 316 aa19.57■□□□□ 0.72
CCDC90B-202ENST00000455220 TFAP4Q01664 338 aa19.57■□□□□ 0.72
CCDC90B-202ENST00000455220 RRP1BQ14684 758 aaKnown RBP19.57■□□□□ 0.72
CCDC90B-202ENST00000455220 CERKLQ49MI3 558 aaPredicted RBP19.57■□□□□ 0.72
CCDC90B-202ENST00000455220 FAM47AQ5JRC9 791 aa19.57■□□□□ 0.72
CCDC90B-202ENST00000455220 FBXL16Q8N461 479 aa19.57■□□□□ 0.72
CCDC90B-202ENST00000455220 ZNF341Q9BYN7 854 aa19.57■□□□□ 0.72
CCDC90B-202ENST00000455220 TCP11L1Q9NUJ3 509 aa19.57■□□□□ 0.72
CCDC90B-202ENST00000455220 ZNF112Q9UJU3 913 aa19.57■□□□□ 0.72
CCDC90B-202ENST00000455220 TSPY3P0CV98 308 aa19.56■□□□□ 0.72
CCDC90B-202ENST00000455220 TSPY8P0CW00 308 aa19.56■□□□□ 0.72
CCDC90B-202ENST00000455220 NEK4P51957 841 aa19.56■□□□□ 0.72
CCDC90B-202ENST00000455220 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.56■□□□□ 0.72
CCDC90B-202ENST00000455220 ALDH8A1Q9H2A2 487 aaPredicted RBP19.56■□□□□ 0.72
CCDC90B-202ENST00000455220 CHST3Q7LGC8 479 aa19.55■□□□□ 0.72
CCDC90B-202ENST00000455220 IQCA1Q86XH1 822 aa19.55■□□□□ 0.72
CCDC90B-202ENST00000455220 TMEM87BQ96K49 555 aa19.55■□□□□ 0.72
CCDC90B-202ENST00000455220 TCEANC2Q96MN5 208 aa19.55■□□□□ 0.72
CCDC90B-202ENST00000455220 AGXT2Q9BYV1 514 aa19.55■□□□□ 0.72
CCDC90B-202ENST00000455220 PDRG1Q9NUG6 133 aa19.55■□□□□ 0.72
CCDC90B-202ENST00000455220 PAPPA2Q9BXP8 1791 aa19.55■□□□□ 0.72
CCDC90B-202ENST00000455220 IGKV6D-41A0A0C4DH26 115 aa19.54■□□□□ 0.72
CCDC90B-202ENST00000455220 NF2P35240 595 aa19.54■□□□□ 0.72
CCDC90B-202ENST00000455220 KLRG1Q96E93 195 aa19.54■□□□□ 0.72
CCDC90B-202ENST00000455220 TRAF5O00463 557 aa19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 ITGBL1O95965 494 aaPredicted RBP19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 CAP2P40123 477 aa19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 NOVP48745 357 aa19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 ABCB5Q2M3G0 1257 aa19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 TMEM179Q6ZVK1 233 aa19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 IGDCC4Q8TDY8 1250 aa19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 ZSCAN10Q96SZ4 725 aaPredicted RBP19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 IL17RBQ9NRM6 502 aa19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 TNKSO95271 1327 aa19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 SH2B2O14492 632 aaPredicted RBP19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 PPP1R12BO60237 982 aaPredicted RBP19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 CTNND1O60716 968 aaKnown RBP19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 USP2O75604 605 aaPredicted RBP19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 GDF11O95390 407 aa19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 JAG1P78504 1218 aa19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 SART3Q15020 963 aaKnown RBP19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 SEC23AQ15436 765 aa19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 MAP3K11Q16584 847 aa19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 CCDC178Q5BJE1 867 aa19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 ZNF784Q8NCA9 323 aaPredicted RBP19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 UBAC1Q9BSL1 405 aa19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 LRRC2Q9BYS8 371 aa19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 GINM1Q9NU53 330 aa19.53■□□□□ 0.72
CCDC90B-202ENST00000455220 ATAD5Q96QE3 1844 aa19.52■□□□□ 0.72
CCDC90B-202ENST00000455220 DOCK1Q14185 1865 aa19.52■□□□□ 0.72
CCDC90B-202ENST00000455220 ST18O60284 1047 aa19.52■□□□□ 0.71
CCDC90B-202ENST00000455220 NMT2O60551 498 aa19.52■□□□□ 0.71
CCDC90B-202ENST00000455220 GUCY1A2P33402 732 aa19.52■□□□□ 0.71
CCDC90B-202ENST00000455220 TOB2Q14106 344 aaPredicted RBP19.52■□□□□ 0.71
CCDC90B-202ENST00000455220 SHROOM1Q2M3G4 852 aaPredicted RBP19.52■□□□□ 0.71
CCDC90B-202ENST00000455220 Q6ZUG5 572 aa19.52■□□□□ 0.71
CCDC90B-202ENST00000455220 ENAHQ8N8S7 591 aaPredicted RBP19.52■□□□□ 0.71
CCDC90B-202ENST00000455220 WRNIP1Q96S55 665 aa19.52■□□□□ 0.71
CCDC90B-202ENST00000455220 ZKSCAN3Q9BRR0 538 aa19.52■□□□□ 0.71
CCDC90B-202ENST00000455220 ZBTB21Q9ULJ3 1066 aa19.52■□□□□ 0.71
CCDC90B-202ENST00000455220 ANGEL1Q9UNK9 670 aaKnown RBP19.52■□□□□ 0.71
CCDC90B-202ENST00000455220 OTOFQ9HC10 1997 aa19.51■□□□□ 0.71
CCDC90B-202ENST00000455220 IFIT3O14879 490 aaKnown RBP19.51■□□□□ 0.71
CCDC90B-202ENST00000455220 GH2P01242 217 aa19.51■□□□□ 0.71
CCDC90B-202ENST00000455220 LIFRP42702 1097 aa19.51■□□□□ 0.71
CCDC90B-202ENST00000455220 AK2P54819 239 aa19.51■□□□□ 0.71
CCDC90B-202ENST00000455220 TMEM67Q5HYA8 995 aa19.51■□□□□ 0.71
CCDC90B-202ENST00000455220 NOL9Q5SY16 702 aaKnown RBP19.51■□□□□ 0.71
CCDC90B-202ENST00000455220 DGKHQ86XP1 1220 aa19.51■□□□□ 0.71
CCDC90B-202ENST00000455220 ANKS1AQ92625 1134 aa19.51■□□□□ 0.71
CCDC90B-202ENST00000455220 CEP95Q96GE4 821 aa19.51■□□□□ 0.71
CCDC90B-202ENST00000455220 LY9Q9HBG7 655 aa19.51■□□□□ 0.71
CCDC90B-202ENST00000455220 CABP5Q9NP86 173 aa19.51■□□□□ 0.71
CCDC90B-202ENST00000455220 GPHNQ9NQX3 736 aaPredicted RBP19.51■□□□□ 0.71
CCDC90B-202ENST00000455220 FZD1Q9UP38 647 aa19.51■□□□□ 0.71
CCDC90B-202ENST00000455220 RBM19Q9Y4C8 960 aaKnown RBP19.51■□□□□ 0.71
CCDC90B-202ENST00000455220 MPHOSPH10O00566 681 aaKnown RBP19.5■□□□□ 0.71
CCDC90B-202ENST00000455220 ASNSP08243 561 aa19.5■□□□□ 0.71
CCDC90B-202ENST00000455220 INPP5BP32019 993 aa19.5■□□□□ 0.71
CCDC90B-202ENST00000455220 FMR1Q06787 632 aaKnown RBP eCLIP19.5■□□□□ 0.71
CCDC90B-202ENST00000455220 ANKRD1Q15327 319 aa19.5■□□□□ 0.71
CCDC90B-202ENST00000455220 RCSD1Q6JBY9 416 aa19.5■□□□□ 0.71
CCDC90B-202ENST00000455220 MTMR4Q9NYA4 1195 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms