RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 ZSCAN25Q6NSZ9 544 aa17.59■□□□□ 0.41
HSPG2-207ENST00000453796 PROCA1Q8NCQ7 364 aaPredicted RBP17.59■□□□□ 0.41
HSPG2-207ENST00000453796 TRIM34Q9BYJ4 488 aa17.59■□□□□ 0.41
HSPG2-207ENST00000453796 PUS7LQ9H0K6 701 aaKnown RBP17.59■□□□□ 0.41
HSPG2-207ENST00000453796 EFCC1Q9HA90 598 aa17.59■□□□□ 0.41
HSPG2-207ENST00000453796 CPA4Q9UI42 421 aa17.59■□□□□ 0.41
HSPG2-207ENST00000453796 ZBTB21Q9ULJ3 1066 aa17.59■□□□□ 0.41
HSPG2-207ENST00000453796 AGTPBP1Q9UPW5 1226 aa17.59■□□□□ 0.41
HSPG2-207ENST00000453796 PRKAB2O43741 272 aa17.58■□□□□ 0.4
HSPG2-207ENST00000453796 CYP2C8P10632 490 aa17.58■□□□□ 0.4
HSPG2-207ENST00000453796 BCRP11274 1271 aa17.58■□□□□ 0.4
HSPG2-207ENST00000453796 SHMT1P34896 483 aa17.58■□□□□ 0.4
HSPG2-207ENST00000453796 RGS19P49795 217 aa17.58■□□□□ 0.4
HSPG2-207ENST00000453796 LACTBP83111 547 aaPredicted RBP17.58■□□□□ 0.4
HSPG2-207ENST00000453796 TREML2Q5T2D2 321 aa17.58■□□□□ 0.4
HSPG2-207ENST00000453796 EXOC6Q8TAG9 804 aa17.58■□□□□ 0.4
HSPG2-207ENST00000453796 PARK7Q99497 189 aaKnown RBP17.58■□□□□ 0.4
HSPG2-207ENST00000453796 ARHGAP39Q9C0H5 1083 aa17.58■□□□□ 0.4
HSPG2-207ENST00000453796 AS3MTQ9HBK9 375 aa17.58■□□□□ 0.4
HSPG2-207ENST00000453796 ATP8A2Q9NTI2 1148 aa17.58■□□□□ 0.4
HSPG2-207ENST00000453796 MCM9Q9NXL9 1143 aa17.58■□□□□ 0.4
HSPG2-207ENST00000453796 PTPN22Q9Y2R2 807 aa17.58■□□□□ 0.4
HSPG2-207ENST00000453796 POLR3DP05423 398 aaPredicted RBP17.57■□□□□ 0.4
HSPG2-207ENST00000453796 CTGFP29279 349 aa17.57■□□□□ 0.4
HSPG2-207ENST00000453796 HMGCS2P54868 508 aa17.57■□□□□ 0.4
HSPG2-207ENST00000453796 ANKRD45Q5TZF3 282 aa17.57■□□□□ 0.4
HSPG2-207ENST00000453796 SUPT16HQ9Y5B9 1047 aaKnown RBP17.57■□□□□ 0.4
HSPG2-207ENST00000453796 DOCK3Q8IZD9 2030 aa17.56■□□□□ 0.4
HSPG2-207ENST00000453796 ERC2O15083 957 aa17.56■□□□□ 0.4
HSPG2-207ENST00000453796 GLRX3O76003 335 aaKnown RBP17.56■□□□□ 0.4
HSPG2-207ENST00000453796 GH2P01242 217 aa17.56■□□□□ 0.4
HSPG2-207ENST00000453796 MX1P20591 662 aa17.56■□□□□ 0.4
HSPG2-207ENST00000453796 BACE1P56817 501 aa17.56■□□□□ 0.4
HSPG2-207ENST00000453796 OSBP2Q969R2 916 aa17.56■□□□□ 0.4
HSPG2-207ENST00000453796 RBBP6Q7Z6E9 1792 aaKnown RBP17.56■□□□□ 0.4
HSPG2-207ENST00000453796 CYP2D6P10635 497 aa17.55■□□□□ 0.4
HSPG2-207ENST00000453796 MTMR2Q13614 643 aa17.55■□□□□ 0.4
HSPG2-207ENST00000453796 CERKLQ49MI3 558 aaPredicted RBP17.55■□□□□ 0.4
HSPG2-207ENST00000453796 SMC5Q8IY18 1101 aa17.55■□□□□ 0.4
HSPG2-207ENST00000453796 APPBP2Q92624 585 aa17.55■□□□□ 0.4
HSPG2-207ENST00000453796 STAP2Q9UGK3 403 aa17.55■□□□□ 0.4
HSPG2-207ENST00000453796 C19orf81C9J6K1 198 aa17.54■□□□□ 0.4
HSPG2-207ENST00000453796 USP17L10C9JJH3 530 aa17.54■□□□□ 0.4
HSPG2-207ENST00000453796 SMIM22K7EJ46 135 aa17.54■□□□□ 0.4
HSPG2-207ENST00000453796 RNF113AO15541 343 aaKnown RBP17.54■□□□□ 0.4
HSPG2-207ENST00000453796 IGHDP01880 384 aa17.54■□□□□ 0.4
HSPG2-207ENST00000453796 ZFYP08048 801 aaPredicted RBP17.54■□□□□ 0.4
HSPG2-207ENST00000453796 GUCY1A2P33402 732 aa17.54■□□□□ 0.4
HSPG2-207ENST00000453796 ARHGEF6Q15052 776 aa17.54■□□□□ 0.4
HSPG2-207ENST00000453796 STRBPQ96SI9 672 aaKnown RBP17.54■□□□□ 0.4
HSPG2-207ENST00000453796 TAOK2Q9UL54 1235 aa17.54■□□□□ 0.4
HSPG2-207ENST00000453796 SLC4A4Q9Y6R1 1079 aa17.54■□□□□ 0.4
HSPG2-207ENST00000453796 GNRH1P01148 92 aa17.53■□□□□ 0.4
HSPG2-207ENST00000453796 KIF22Q14807 665 aa17.53■□□□□ 0.4
HSPG2-207ENST00000453796 ABCB5Q2M3G0 1257 aa17.53■□□□□ 0.4
HSPG2-207ENST00000453796 C12orf60Q5U649 245 aa17.53■□□□□ 0.4
HSPG2-207ENST00000453796 TRIM47Q96LD4 638 aa17.53■□□□□ 0.4
HSPG2-207ENST00000453796 BRCA2P51587 3418 aa17.53■□□□□ 0.4
HSPG2-207ENST00000453796 GREB1LQ9C091 1923 aaPredicted RBP17.53■□□□□ 0.4
HSPG2-207ENST00000453796 CYP2D7A0A087X1C5 515 aa17.52■□□□□ 0.4
HSPG2-207ENST00000453796 GSG1L2A8MUP6 293 aa17.52■□□□□ 0.4
HSPG2-207ENST00000453796 USP17L12C9JPN9 530 aa17.52■□□□□ 0.4
HSPG2-207ENST00000453796 USP17L21D6R901 530 aa17.52■□□□□ 0.4
HSPG2-207ENST00000453796 HOXA7P31268 230 aaPredicted RBP17.52■□□□□ 0.4
HSPG2-207ENST00000453796 PDE1AP54750 535 aa17.52■□□□□ 0.4
HSPG2-207ENST00000453796 CTR9Q6PD62 1173 aa17.52■□□□□ 0.4
HSPG2-207ENST00000453796 SLC44A5Q8NCS7 719 aa17.52■□□□□ 0.4
HSPG2-207ENST00000453796 DYNLL2Q96FJ2 89 aa17.52■□□□□ 0.4
HSPG2-207ENST00000453796 RWDD1Q9H446 243 aaPredicted RBP17.52■□□□□ 0.4
HSPG2-207ENST00000453796 SWAP70Q9UH65 585 aa17.52■□□□□ 0.4
HSPG2-207ENST00000453796 PNMA3Q9UL41 463 aa17.52■□□□□ 0.4
HSPG2-207ENST00000453796 PTCH2Q9Y6C5 1203 aa17.52■□□□□ 0.4
HSPG2-207ENST00000453796 PSMC4P43686 418 aa17.51■□□□□ 0.39
HSPG2-207ENST00000453796 SOX10P56693 466 aa17.51■□□□□ 0.39
HSPG2-207ENST00000453796 PABPC4Q13310 644 aaKnown RBP eCLIP17.51■□□□□ 0.39
HSPG2-207ENST00000453796 ARMC5Q96C12 935 aa17.51■□□□□ 0.39
HSPG2-207ENST00000453796 C12orf42Q96LP6 360 aa17.51■□□□□ 0.39
HSPG2-207ENST00000453796 ASCC2Q9H1I8 757 aaPredicted RBP17.51■□□□□ 0.39
HSPG2-207ENST00000453796 EMILIN3Q9NT22 766 aa17.51■□□□□ 0.39
HSPG2-207ENST00000453796 ZBTB47Q9UFB7 747 aaPredicted RBP17.51■□□□□ 0.39
HSPG2-207ENST00000453796 M0R2C6 588 aa17.5■□□□□ 0.39
HSPG2-207ENST00000453796 GPAA1O43292 621 aa17.5■□□□□ 0.39
HSPG2-207ENST00000453796 OSBPP22059 807 aa17.5■□□□□ 0.39
HSPG2-207ENST00000453796 PRMT2P55345 433 aa17.5■□□□□ 0.39
HSPG2-207ENST00000453796 SEPT2Q15019 361 aa17.5■□□□□ 0.39
HSPG2-207ENST00000453796 RAB3GAP1Q15042 981 aa17.5■□□□□ 0.39
HSPG2-207ENST00000453796 FAM110CQ1W6H9 321 aa17.5■□□□□ 0.39
HSPG2-207ENST00000453796 SBK1Q52WX2 424 aa17.5■□□□□ 0.39
HSPG2-207ENST00000453796 GIMAP6Q6P9H5 292 aa17.5■□□□□ 0.39
HSPG2-207ENST00000453796 C16orf86Q6ZW13 317 aa17.5■□□□□ 0.39
HSPG2-207ENST00000453796 SMCR8Q8TEV9 937 aaPredicted RBP17.5■□□□□ 0.39
HSPG2-207ENST00000453796 SEC62Q99442 399 aaKnown RBP17.5■□□□□ 0.39
HSPG2-207ENST00000453796 LNPKQ9C0E8 428 aa17.5■□□□□ 0.39
HSPG2-207ENST00000453796 EPB41L4AQ9HCS5 686 aaPredicted RBP17.5■□□□□ 0.39
HSPG2-207ENST00000453796 CABP5Q9NP86 173 aa17.5■□□□□ 0.39
HSPG2-207ENST00000453796 TMOD4Q9NZQ9 345 aa17.5■□□□□ 0.39
HSPG2-207ENST00000453796 SRRDQ9UH36 339 aa17.5■□□□□ 0.39
HSPG2-207ENST00000453796 PLXNB2O15031 1838 aa17.49■□□□□ 0.39
HSPG2-207ENST00000453796 RLFQ13129 1914 aa17.49■□□□□ 0.39
HSPG2-207ENST00000453796 CDK8P49336 464 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms